Xiphophorus hellerii (green swordtail): 116715798
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Entry
116715798 CDS
T07363
Name
(RefSeq) amyloid-beta A4 protein-like isoform X1
KO
K04520
amyloid beta A4 protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116715798
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xhe01002
]
116715798
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xhe00535
]
116715798
00536 Glycosaminoglycan binding proteins [BR:
xhe00536
]
116715798
Peptidases and inhibitors [BR:
xhe01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
116715798
Proteoglycans [BR:
xhe00535
]
Cell surface proteoglycans
Others
116715798
Glycosaminoglycan binding proteins [BR:
xhe00536
]
Heparan sulfate / Heparin
Others
116715798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
116715798
NCBI-ProteinID:
XP_032412346
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All DBs
Position
24:complement(8260453..8287699)
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AA seq
763 aa
AA seq
DB search
MGDRVALLLLAVLASAMAVEVPADVSMGLLAEPQVAMFCGKLNMHINVQSGKWEPDPSGR
KSCIGTKEGILEYCQEVYPELQITNVVEANQPVSIQNWCKKGRNQCRSHMHIVVPYRCLV
GEFVSDALLVPDKCKFLHQERMDKCESHLHWHTVAKENCGDRTMNLHDYGMLLPCGIDRF
RGVEFVCCPSEAERGADSVEQDSDDSDVWWGGVETDYADNSMVREPEPAEQQEETKPSVV
EEDEDKPEEEGDDDEEEDEEEEDDQLDNDQDGDGEEDEEVVDEEDDDDEDDGVIIDALDD
ADEPTTNVAMTTTTTTTTESVEEVVKDVCWANAETGPCRAMLPRWYFDRQDGRCVQFIYG
GCGGNRNNFDSEEYCLAVCSSVIPTAKPSSPDAVDNYLETPADENEHAHFQKAKESLEAK
HRERMSQVMREWEEAEREAKNLPRADKKAVIHRFQEKVEALEQEAASERQQLVETHMARV
EALLNDRRRLALESYLTALQQDPPRPRHVFSLLKKYVRAEQKDRQHTLKHFEHIRMVDPK
KAAQIRPQVLTHLRVIEERMNQSLGLLYKVPGVADDIQDQVELLQREQAEMAQQLANLQT
DARVSYGNDALMPDQEFGDGQTDPLPQEDTLGGVGFIHPESFNQQNTENQVTGVKMDAVP
EMRMETEDRQSTEYEVHHQKLVFFAEDVSSNKGAIIGLMVGGVVIATVIVITLVMLRKKQ
YTSIHHGVIEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgggagaccgagtggctttactgctgctcgctgtgttggcctcggccatggctgtggag
gttcccgcggacgtttccatgggtctgctggccgagccccaggtggcgatgttttgcggt
aaactcaacatgcacatcaacgtgcagagcggcaagtgggagcccgacccctccggcagg
aagagctgcatcggtaccaaggagggcatcttggagtactgccaggaggtgtatccagaa
ctccagatcaccaacgtagtggaagccaaccagccagtcagcatccagaactggtgcaag
aagggacgcaaccagtgccgcagccatatgcacatagtggtgccctatcgctgcctggtg
ggagaatttgtgagcgacgccctgctggttcctgacaagtgcaaattcctccaccaggag
cggatggataaatgcgagagccacctgcactggcacaccgtagccaaggagaactgtgga
gaccgcaccatgaatctccatgactacgggatgctgctgccctgcgggatcgaccgcttc
agaggagtggaatttgtctgctgccccagcgaggcggagaggggcgcggacagcgtagag
caggattctgacgattctgacgtctggtggggcggcgtggagacggactacgccgacaac
agcatggtgcgggagccggagccagcagagcagcaagaggaaaccaaaccatctgtggtg
gaggaggacgaggacaagccggaggaggagggtgacgacgacgaagaggaggatgaggag
gaggaggatgatcagttggacaacgaccaggacggagacggagaggaggacgaggaggtg
gtggacgaggaggatgacgatgatgaggacgatggcgtcatcatcgacgcgcttgacgac
gccgacgagcccaccactaacgtcgccatgacgaccaccaccaccacaaccacggagtct
gtggaggaagttgtcaaagatgtgtgctgggccaatgctgagactggcccatgccgggcc
atgctgccccgctggtactttgaccgccaggatggccgctgtgttcagtttatctacggt
ggctgcggaggcaacaggaataactttgattcagaggagtactgcctggctgtctgcagc
agcgtcattcccacagcaaagcccagctcccccgacgcggtggacaactacctagagacg
cctgccgacgagaacgagcacgcccacttccagaaagcaaaggagagtctggaagcgaag
caccgcgagaggatgtcccaggtgatgagggagtgggaggaggccgagagggaagccaag
aatcttccacgtgccgacaagaaagctgtgattcaccgtttccaagagaaggtggaggct
ctggagcaggaggcggccagcgagcgccagcagctggtggagacccacatggcccgggtg
gaggctctgctcaacgaccggcgccgcctggctctggagagctacctgacggctctgcag
caggacccacccaggccccgtcacgtcttcagcctgctgaagaagtacgtccgcgccgag
cagaaggacaggcagcacaccctcaaacactttgaacacatccgcatggtggaccccaaa
aaggctgctcagatcaggcctcaggtgcttactcatctgcgtgtaattgaggaacgtatg
aaccagtctctgggccttctctacaaagtccctggtgttgccgacgacatccaagaccaa
gttgagctcctgcagagggagcaggccgagatggcccagcagctggccaacctgcagacc
gacgccagggtgagctacgggaacgacgccctgatgccagaccaggaattcggagatggc
cagactgacccgctgccccaggaggacaccctgggaggagtcggcttcatccaccccgag
agcttcaaccagcagaacacagagaaccaggtgaccggagtcaagatggacgccgtcccc
gagatgcggatggagacagaggacagacagagcactgaatatgaagtccaccaccagaaa
ctggtcttcttcgccgaggacgtcagctccaacaagggcgccataatcgggctcatggtg
ggaggcgtggtcatagcaacggtgatcgtcatcaccctggtgatgctgaggaagaagcag
tacacttccatccaccacggagtcattgaggtggatgctgccgtcacccccgaggagcgc
cacctgtccaagatgcagcagaatggctacgagaaccccacctacaagttctttgagcag
atgcagaactga
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