Xiphophorus hellerii (green swordtail): 116715835
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Entry
116715835 CDS
T07363
Symbol
obsl1
Name
(RefSeq) obscurin-like protein 1
KO
K19574
obscurin-like protein 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116715835 (obsl1)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
116715835 (obsl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
Izumo-Ig
Ig_4
V-set_CD47
C2-set_2
VEGFR-1-like_Ig-like
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
116715835
NCBI-ProteinID:
XP_032412416
LinkDB
All DBs
Position
24:complement(5695134..5710566)
Genome browser
AA seq
2204 aa
AA seq
DB search
MDILGGAPRVLGYPRPIVAQFGADATLRCQIGGDPHPDVIWERKNIKILSEGRYKISEEG
KAYLLTITGVTQQDAGQYICKARNSVGETYAAASLKVEGELLDNNGESIQSNSNGIKENG
DFGETLNGYNMVQKEKEMNGDYKWRNQANDQRKEIDLTSNDKPRFLIKPLSLRVDRGEDA
AFSCKIWGTPLPEVTWEKDGKKLNDIFENSHFSVSIQDGGWFQLKIYRTRMPDKGVYTCK
AVNSYGEALAGAVLLVEPIPEREESKTSSISHVGSQRSPKQRGGRFSLSKLAEEPPINPS
KVKKFVVTEGKHAKFRCFVTGKPKPEIIWKKDGVPLEPDRRHLVFEDREGYYTLKVLYCK
MQDTGLYVCAASNTLGNTLSAVHLTVKGPAVRFRRPLKDVEVKERDVAVLECEVPDEMIP
AAWYLEDQRLMPSSKYGMEQKGTRRRLTIHNVGMDDDGVYLCEMPDGAKSIAELAVKGTI
VCKLPRKLEVLEGENAAFCVEVENDEMEVHWFKDGLMLHETHQTILKAFGKTHILVFVNV
AYHDSGVVTFVAGRSKSSSRLKVKATRHSPPICPADVKMDIDRPNSALFSWVPAPNSQTT
TRSMFVLERTEIGSQEWQKCFTSETVTSAEVSGDSVPCEGDYRFRVCCVNKYGRSGHVEF
PKVVHLVPGPKIHKHLQGCEVMEGEDAQFSIELSAQMVGTWFLNSSQLQHGGRYSVQLNQ
AKHSLVIHEAGTADDTAEITFIANGVRDSAVLKVKPAVFKFVPLSDLESSKRVETGDAIV
LYCEVTHPFAKVTWFKNGEKLQVSDGLNIQSDGKMRRIVIQSAEASDSGVYTCQTSGDVI
KFNVDVEGPPVEFSPASQEELHKNSMELDPVVLLCHVSREDAEAAWYKDGCEIRASDNIT
LQVEGTMRRLIIRSAEASDAGHYTCKSGNNSLEFTVNVREPPVTIVEPKDDIVMTCYISE
EINLQCELSRSNGKVCWFKDGQEVQESDNIQLRSEGPYRRLTILCGSGADSGEYVCETDG
DSIFFQITVTEPPVRIISHCEPEVELTHVAPERLELCCEVSQADAPVRWYKDSLEVEESP
NLILEVDGAQRRLVIPLTTVSDTGEYICDTENDSVAFLVNITEPPVMLSRPKNLPDKLES
FAGKPIVLETEVSRLTADVKWLLNGKEIEQSSNIAITEDGIFRRLTINSPTPNDSGKYTC
DATDDKIDFQVKVSEPPVKILRKCEIKTDLKFLVSDDIVLECEISQANGNSKWYKDGCQV
QGDERFCEEEEGAFRSLVILNAELKDSGEYFLDVGDDSISFYVKVEEPPVSIVGNSCDPD
YQELMGGDDLILACELSRANAPVQWYCNDRLLTSDSRTIIECYGSLRKLIISNIQPSDSG
KYVCDAVNDKMVNIIRVQEPPVTFVNKEDDVVVTGYEAESVTLMSYVSKESAVVRWLKDW
TPVEGERFRELMDGHKRSLTIQPLRRSDAGEYTCDVNNDQMHFSLLVKEMRIKFVRPLYD
TVAHADGMVTLHCEVCKPKADVQWLKNGIEVVGSRRFSIRADGVERSLTIHRLTHEDAGQ
YACESRDDRTAAMLRVEMPRVVEFLTELHNTTVLEGEDATFKCVVSPEDVSLLWLMDNEP
MSIGDRFQASRNGLCHTLVIKKCQMIDCSRITAEAEGKMSKASLKVQEAQVMFTKKMEPV
TAEEFEEATLETEISLETGEVQWMRQGVVIQSGPRHTLAQNGCKRSLTIHKLNLSDRGTY
RCETLHDRTQVKLNVEPRKISICKGLTDQETFERETASFEVELSHIDVEGIWQKDGIRVK
PNNQFRVSINGLVHSLTLTNLTLEDTGTIVFSAEGARSTARLIIKETPVAILKPLVDVRV
EEEFPVTLECEFSRQNVEVRWLKNGNELKPGKDHRIYSMGRKRFCQILQCSVADSGSYTC
DTGEISTFCSLEVYEHKLEIVQDLEDLYIQEDQNAVFMCELSLEDVAGEWYKNGHKIRPS
STTKIRTEGPKHFLLICNVKAEDAGDVQFVARDVKSTASLEVEELPVSIVKPLRDRTALE
THRVILECTVSSPRCSATWYKGKQELHPSDRMEIITEDCSHKLVIHQVAVEDEGTYSIEV
GEHTSKAKLMVEAKALVMVKGLENVQVTEPESASFQCEVSVDINKPPVWTLNGVTLRSGP
AVRLEDHGTVHKLTLRDTSVDMSGTVKFTLGKAKSSATFTVIGK
NT seq
6615 nt
NT seq
+upstream
nt +downstream
nt
atggatattcttggaggtgcacctcgtgttttgggctatcctcgccctattgtggcacag
tttggggcagatgcaaccctaaggtgccaaattggtggagaccctcatccggatgtcatc
tgggaacgtaaaaacattaaaattctgtctgaggggcggtacaagatctcagaggaggga
aaagcatacttgttgaccattactggagttacccaacaagatgccggtcagtacatatgc
aaggctagaaacagcgtaggagaaacctacgcagcagcctctctcaaagtggaaggagag
cttctcgacaataatggagaatcgatacaatcaaacagtaatggcataaaggaaaatggg
gactttggggaaaccctaaatggctacaacatggtgcagaaagagaaggaaatgaatgga
gactacaagtggaggaatcaagcaaatgatcaacggaaagagattgatttaacatcaaac
gacaaaccaagattcctgatcaagcctttgtccctgcgtgtggatcgtggagaggatgcc
gccttctcatgtaaaatctggggcacacctttgccggaggtgacttgggagaaagatggg
aagaagctcaatgatatctttgagaactctcacttcagtgtgagcattcaagacgggggc
tggtttcagctcaagatctacagaacgcgcatgccggacaaaggcgtctacacctgcaag
gccgtgaactcctatggcgaggccttagcgggagctgtccttcttgtcgagcccattcca
gagcgagaagagagtaaaacgtcatcaatcagtcatgtcggcagccagaggtcacccaaa
caaagaggcgggaggttcagtttgtcaaagctcgcagaggagccgcccatcaacccgtcc
aaagtcaaaaagtttgtagtgacagaggggaagcatgccaagtttcggtgctttgtaaca
ggcaagcccaaaccagagatcatctggaagaaagacggcgttcctttggaacccgacaga
cgacacttggtatttgaggatcgggaaggctactacacgctgaaggttctctactgtaaa
atgcaggatacagggctatatgtatgcgccgcatcgaacactctgggaaacaccctgagt
gctgttcacctgactgtgaaagggcctgcagtgcggtttagacggccattaaaagacgtg
gaggtaaaggagagggatgtcgctgtgctggagtgtgaggtgcctgatgagatgatccca
gctgcctggtacctggaggaccagagattgatgcctagcagtaagtatgggatggaacag
aaagggacaaggcgaagactcaccatccataatgttggaatggatgacgatggggtttat
ctttgtgagatgccagatggagcaaagagcattgccgagctagcagtaaaaggcacaatt
gtttgtaaactacctcggaaactggaggtgctggaaggtgagaacgcagcgttctgcgtc
gaggtcgagaatgatgaaatggaggtccactggttcaaagatggtctgatgctacacgag
acacaccagaccatcctcaaggctttcggcaagacccacatcctggtttttgtcaacgtg
gcctatcatgactcgggggttgtgacgtttgttgcaggaagatctaaaagttcatcacga
ctcaaagtcaaagcaaccagacacagcccgccaatctgtcctgctgacgtcaaaatggac
atagaccgacccaacagtgctctcttctcctgggtgcctgcgcccaacagccagactacc
acccgctccatgtttgtccttgagagaacggagattggttctcaggagtggcagaaatgc
ttcacctcagagaccgtcacttccgctgaagtttccggtgacagcgttccttgtgaaggc
gactaccgttttcgggtgtgttgcgtcaataagtacggacgcagtggccatgtggagttc
cccaaagtagtccaccttgtcccagggcccaagattcataaacatctccaagggtgtgag
gtgatggaaggcgaggacgctcaattctccatcgaactgtccgcacagatggttggaacc
tggtttctgaacagctcccagctgcagcatggtggaagatattcagtgcagctgaaccaa
gcaaagcactctttggtgatccatgaagccggaactgctgatgacacagcagaaatcaca
ttcatcgccaatggagtgagggattcagctgtgctcaaggttaaacctgctgtattcaag
ttcgtccctctgtcagacctggaaagcagtaagagagtggaaaccggtgacgccattgtg
ctctactgtgaggtcacccatcctttcgctaaggtaacctggtttaaaaatggtgagaaa
ctccaagtgagcgatgggctaaacatccaatcagacgggaagatgaggaggattgtgata
cagtctgctgaagcatccgactctggagtttacacatgtcaaacttcaggggatgtcatc
aaattcaacgtggacgttgaagggcctccagtagagttcagtccagcctctcaggaagaa
cttcataagaacagcatggaattagatcctgtggttctgctttgccacgtctccagagaa
gacgctgaagctgcttggtataaagatggttgtgagattcgggctagtgacaacattacc
ctgcaggtggagggcaccatgaggaggctaatcatccgatctgcagaggcttcagatgct
ggacattacacttgcaagtctgggaacaacagcttagaatttacagtcaatgtcagagag
cccccagtgacaattgttgaacctaaagatgacattgtgatgacatgttacatatcagag
gagatcaacttgcagtgtgagttatctcggtccaacgggaaggtctgttggtttaaggat
ggtcaggaggtgcaggaaagcgacaatatccagctaagatcggagggaccttacaggagg
ctgaccattctctgtggctcaggagcggatagtggagagtatgtctgtgaaacagatgga
gactctatcttcttccagataactgttacagagcctcctgtaagaatcatctctcattgt
gaacccgaggtggaactcacccatgttgcaccagagagactggaactctgctgtgaagtg
tcccaggcggatgctccagttcgatggtacaaagatagtttagaggtagaagagagcccc
aacttgatactggaagtagatggggcccaacgacggctagttatacctttaacaactgtc
agtgacacaggagagtatatatgtgacactgaaaatgactcagttgcctttcttgttaat
atcacagagccaccagtgatgctaagtcgacccaaaaacttgccagacaaactggaaagt
tttgctggtaaaccaatcgttctagagactgaggtgtcacgtctaacagcagatgtcaag
tggctactcaatggcaaagaaatagagcaaagtagtaatatcgcaatcacagaagatggg
atctttcgtcgtttgaccatcaactctcccactccaaacgattctgggaaatacacttgt
gacgctacagatgataaaattgatttccaggtgaaagtttcagagccgcctgtgaagatc
ttgagaaagtgtgagatcaagacagatctaaagtttctagtttcagatgacattgttctt
gagtgcgagatctctcaagctaatggaaacagcaaatggtacaaggatggctgtcaagtt
cagggtgatgaaaggttctgtgaagaggaggaaggtgcattccggtcgttggtaatcctt
aatgcagaactcaaagattcaggggaatacttcctagatgttggggatgacagtatcagt
ttctacgttaaagtagaagagcctcccgtaagcattgtaggaaactcatgcgaccctgat
taccaggaattgatgggaggtgatgacctgatattggcctgtgagttgtcccgtgctaat
gccccagtgcagtggtactgtaatgacaggcttctcaccagcgattcccgtaccatcatt
gaatgctatggaagtctgagaaaacttattatttcaaacatccagccctcggattctgga
aagtatgtgtgtgatgcggtgaacgacaagatggtcaacataatccgtgttcaagaacct
ccggtaacttttgtcaacaaggaagatgatgtggttgtgacaggttacgaagctgagagc
gtgactttaatgagctatgtgtccaaagaaagtgcggttgtacgctggcttaaagactgg
acaccagttgaaggcgaacggtttcgagaactcatggacggccataaacggagtcttacc
atccaacctttaaggcggtctgatgctggtgaatacacctgtgatgtcaacaatgaccag
atgcacttcagtctactagtgaaagaaatgaggataaaatttgtgcgaccactctatgac
actgtggctcatgctgacggcatggtgacactgcactgtgaggtgtgcaaaccaaaagca
gatgtgcaatggcttaagaatgggatagaagtagttggaagcaggagattctccattcga
gcagatggtgtcgagagaagcttgaccatccatcgtttaactcacgaggacgcagggcag
tatgcctgtgaatccagagatgatcggaccgccgcaatgctaagagtggagatgcctcga
gttgttgagtttcttaccgaacttcacaacacaactgtgctagaaggagaagatgccacc
tttaaatgtgttgtttctcctgaggatgtttccttgctttggcttatggacaacgaacca
atgtctataggggatcgcttccaagcgagtcgaaatggattgtgccacaccttggtgatt
aaaaagtgccagatgatagactgttccaggatcacagcagaagctgaaggaaaaatgagc
aaggctagtctcaaagttcaggaagctcaagtcatgttcaccaagaaaatggaacctgtg
acagcagaggagtttgaagaggctaccctagagacagaaatcagcctggagactggtgag
gttcagtggatgaggcaaggggtagtcatccagtctggtcctcgtcataccctggcccag
aatggctgtaaaagaagcttaactatccacaagctgaacctgtcggaccgaggaacatac
cgctgcgagaccctgcatgatcggacacaggtcaaactcaatgtagaaccccgaaagatc
tccatctgtaaaggcctaacggatcaagaaacatttgaacgagagactgcctcctttgag
gtggagctctcccatatagacgtggaaggcatctggcagaaagatggcatccgcgtaaag
ccaaacaaccagtttagggtgagcatcaacgggctagtccatagccttaccctgacaaac
ttaactctggaggacacaggcaccatcgtcttctcggctgaaggagcgcgatcgactgca
aggctcataattaaagagacccctgtggccatcctgaaaccactggttgatgttcgcgtg
gaagaagaatttccggtcactcttgagtgtgaattttccagacaaaatgtcgaagtcaga
tggcttaagaacggaaacgagctgaagccagggaaggaccatcgaatctattccatgggt
cgaaagcggttctgccagatccttcaatgctctgttgctgactctggttcctatacatgt
gacacaggcgaaataagcaccttctgttctttggaagtttatgagcacaagttggagata
gtacaggatcttgaggacctttacatccaggaagaccagaatgctgtgtttatgtgcgag
ctctctctggaggatgtggctggggagtggtacaagaatggtcacaagatcagacccagt
agcaccacaaagatccgcacagaagggcccaaacacttcctgctgatatgcaacgttaaa
gctgaggatgctggagatgtccaatttgtagcaagggatgtcaagtcaacagcctccctt
gaggtagaagagctcccagtttccattgtaaaaccactgcgagacagaacagccctggag
acccaccgagtgatccttgaatgcaccgtttcctcccctcgctgcagtgcaacctggtac
aaaggcaaacaggaactacatccttcagacaggatggagattataacagaagactgttcc
cataaactagtaatccaccaggttgctgtggaggacgagggaacttacagtattgaggtt
ggagagcacacatccaaagcaaaactgatggttgaagccaaggctctcgtgatggtgaaa
ggacttgagaatgtccaggtgacagagccggagtcagcttctttccagtgtgaagtctct
gttgacatcaacaaacctccagtttggacgttaaatggagtgacccttcgatcaggccct
gccgtccgtctggaagaccacgggacagtccacaaactcactctgagggacacaagcgtg
gacatgagtgggacggtcaagttcacattgggcaaagccaaaagcagtgccacgtttact
gtgattggaaagtag
DBGET
integrated database retrieval system
