KEGG   Xiphophorus hellerii (green swordtail): 116715835
Entry
116715835         CDS       T07363                                 
Symbol
obsl1
Name
(RefSeq) obscurin-like protein 1
  KO
K19574  obscurin-like protein 1
Organism
xhe  Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xhe03036]
    116715835 (obsl1)
Chromosome and associated proteins [BR:xhe03036]
 Eukaryotic type
  Centrosome formation proteins
   3M complex
    116715835 (obsl1)
SSDB
Motif
Pfam: I-set Ig_3 Ig_2 ig V-set Izumo-Ig Ig_4 V-set_CD47 C2-set_2 VEGFR-1-like_Ig-like Ig_C17orf99
Other DBs
NCBI-GeneID: 116715835
NCBI-ProteinID: XP_032412416
LinkDB
Position
24:complement(5695134..5710566)
AA seq 2204 aa
MDILGGAPRVLGYPRPIVAQFGADATLRCQIGGDPHPDVIWERKNIKILSEGRYKISEEG
KAYLLTITGVTQQDAGQYICKARNSVGETYAAASLKVEGELLDNNGESIQSNSNGIKENG
DFGETLNGYNMVQKEKEMNGDYKWRNQANDQRKEIDLTSNDKPRFLIKPLSLRVDRGEDA
AFSCKIWGTPLPEVTWEKDGKKLNDIFENSHFSVSIQDGGWFQLKIYRTRMPDKGVYTCK
AVNSYGEALAGAVLLVEPIPEREESKTSSISHVGSQRSPKQRGGRFSLSKLAEEPPINPS
KVKKFVVTEGKHAKFRCFVTGKPKPEIIWKKDGVPLEPDRRHLVFEDREGYYTLKVLYCK
MQDTGLYVCAASNTLGNTLSAVHLTVKGPAVRFRRPLKDVEVKERDVAVLECEVPDEMIP
AAWYLEDQRLMPSSKYGMEQKGTRRRLTIHNVGMDDDGVYLCEMPDGAKSIAELAVKGTI
VCKLPRKLEVLEGENAAFCVEVENDEMEVHWFKDGLMLHETHQTILKAFGKTHILVFVNV
AYHDSGVVTFVAGRSKSSSRLKVKATRHSPPICPADVKMDIDRPNSALFSWVPAPNSQTT
TRSMFVLERTEIGSQEWQKCFTSETVTSAEVSGDSVPCEGDYRFRVCCVNKYGRSGHVEF
PKVVHLVPGPKIHKHLQGCEVMEGEDAQFSIELSAQMVGTWFLNSSQLQHGGRYSVQLNQ
AKHSLVIHEAGTADDTAEITFIANGVRDSAVLKVKPAVFKFVPLSDLESSKRVETGDAIV
LYCEVTHPFAKVTWFKNGEKLQVSDGLNIQSDGKMRRIVIQSAEASDSGVYTCQTSGDVI
KFNVDVEGPPVEFSPASQEELHKNSMELDPVVLLCHVSREDAEAAWYKDGCEIRASDNIT
LQVEGTMRRLIIRSAEASDAGHYTCKSGNNSLEFTVNVREPPVTIVEPKDDIVMTCYISE
EINLQCELSRSNGKVCWFKDGQEVQESDNIQLRSEGPYRRLTILCGSGADSGEYVCETDG
DSIFFQITVTEPPVRIISHCEPEVELTHVAPERLELCCEVSQADAPVRWYKDSLEVEESP
NLILEVDGAQRRLVIPLTTVSDTGEYICDTENDSVAFLVNITEPPVMLSRPKNLPDKLES
FAGKPIVLETEVSRLTADVKWLLNGKEIEQSSNIAITEDGIFRRLTINSPTPNDSGKYTC
DATDDKIDFQVKVSEPPVKILRKCEIKTDLKFLVSDDIVLECEISQANGNSKWYKDGCQV
QGDERFCEEEEGAFRSLVILNAELKDSGEYFLDVGDDSISFYVKVEEPPVSIVGNSCDPD
YQELMGGDDLILACELSRANAPVQWYCNDRLLTSDSRTIIECYGSLRKLIISNIQPSDSG
KYVCDAVNDKMVNIIRVQEPPVTFVNKEDDVVVTGYEAESVTLMSYVSKESAVVRWLKDW
TPVEGERFRELMDGHKRSLTIQPLRRSDAGEYTCDVNNDQMHFSLLVKEMRIKFVRPLYD
TVAHADGMVTLHCEVCKPKADVQWLKNGIEVVGSRRFSIRADGVERSLTIHRLTHEDAGQ
YACESRDDRTAAMLRVEMPRVVEFLTELHNTTVLEGEDATFKCVVSPEDVSLLWLMDNEP
MSIGDRFQASRNGLCHTLVIKKCQMIDCSRITAEAEGKMSKASLKVQEAQVMFTKKMEPV
TAEEFEEATLETEISLETGEVQWMRQGVVIQSGPRHTLAQNGCKRSLTIHKLNLSDRGTY
RCETLHDRTQVKLNVEPRKISICKGLTDQETFERETASFEVELSHIDVEGIWQKDGIRVK
PNNQFRVSINGLVHSLTLTNLTLEDTGTIVFSAEGARSTARLIIKETPVAILKPLVDVRV
EEEFPVTLECEFSRQNVEVRWLKNGNELKPGKDHRIYSMGRKRFCQILQCSVADSGSYTC
DTGEISTFCSLEVYEHKLEIVQDLEDLYIQEDQNAVFMCELSLEDVAGEWYKNGHKIRPS
STTKIRTEGPKHFLLICNVKAEDAGDVQFVARDVKSTASLEVEELPVSIVKPLRDRTALE
THRVILECTVSSPRCSATWYKGKQELHPSDRMEIITEDCSHKLVIHQVAVEDEGTYSIEV
GEHTSKAKLMVEAKALVMVKGLENVQVTEPESASFQCEVSVDINKPPVWTLNGVTLRSGP
AVRLEDHGTVHKLTLRDTSVDMSGTVKFTLGKAKSSATFTVIGK
NT seq 6615 nt   +upstreamnt  +downstreamnt
atggatattcttggaggtgcacctcgtgttttgggctatcctcgccctattgtggcacag
tttggggcagatgcaaccctaaggtgccaaattggtggagaccctcatccggatgtcatc
tgggaacgtaaaaacattaaaattctgtctgaggggcggtacaagatctcagaggaggga
aaagcatacttgttgaccattactggagttacccaacaagatgccggtcagtacatatgc
aaggctagaaacagcgtaggagaaacctacgcagcagcctctctcaaagtggaaggagag
cttctcgacaataatggagaatcgatacaatcaaacagtaatggcataaaggaaaatggg
gactttggggaaaccctaaatggctacaacatggtgcagaaagagaaggaaatgaatgga
gactacaagtggaggaatcaagcaaatgatcaacggaaagagattgatttaacatcaaac
gacaaaccaagattcctgatcaagcctttgtccctgcgtgtggatcgtggagaggatgcc
gccttctcatgtaaaatctggggcacacctttgccggaggtgacttgggagaaagatggg
aagaagctcaatgatatctttgagaactctcacttcagtgtgagcattcaagacgggggc
tggtttcagctcaagatctacagaacgcgcatgccggacaaaggcgtctacacctgcaag
gccgtgaactcctatggcgaggccttagcgggagctgtccttcttgtcgagcccattcca
gagcgagaagagagtaaaacgtcatcaatcagtcatgtcggcagccagaggtcacccaaa
caaagaggcgggaggttcagtttgtcaaagctcgcagaggagccgcccatcaacccgtcc
aaagtcaaaaagtttgtagtgacagaggggaagcatgccaagtttcggtgctttgtaaca
ggcaagcccaaaccagagatcatctggaagaaagacggcgttcctttggaacccgacaga
cgacacttggtatttgaggatcgggaaggctactacacgctgaaggttctctactgtaaa
atgcaggatacagggctatatgtatgcgccgcatcgaacactctgggaaacaccctgagt
gctgttcacctgactgtgaaagggcctgcagtgcggtttagacggccattaaaagacgtg
gaggtaaaggagagggatgtcgctgtgctggagtgtgaggtgcctgatgagatgatccca
gctgcctggtacctggaggaccagagattgatgcctagcagtaagtatgggatggaacag
aaagggacaaggcgaagactcaccatccataatgttggaatggatgacgatggggtttat
ctttgtgagatgccagatggagcaaagagcattgccgagctagcagtaaaaggcacaatt
gtttgtaaactacctcggaaactggaggtgctggaaggtgagaacgcagcgttctgcgtc
gaggtcgagaatgatgaaatggaggtccactggttcaaagatggtctgatgctacacgag
acacaccagaccatcctcaaggctttcggcaagacccacatcctggtttttgtcaacgtg
gcctatcatgactcgggggttgtgacgtttgttgcaggaagatctaaaagttcatcacga
ctcaaagtcaaagcaaccagacacagcccgccaatctgtcctgctgacgtcaaaatggac
atagaccgacccaacagtgctctcttctcctgggtgcctgcgcccaacagccagactacc
acccgctccatgtttgtccttgagagaacggagattggttctcaggagtggcagaaatgc
ttcacctcagagaccgtcacttccgctgaagtttccggtgacagcgttccttgtgaaggc
gactaccgttttcgggtgtgttgcgtcaataagtacggacgcagtggccatgtggagttc
cccaaagtagtccaccttgtcccagggcccaagattcataaacatctccaagggtgtgag
gtgatggaaggcgaggacgctcaattctccatcgaactgtccgcacagatggttggaacc
tggtttctgaacagctcccagctgcagcatggtggaagatattcagtgcagctgaaccaa
gcaaagcactctttggtgatccatgaagccggaactgctgatgacacagcagaaatcaca
ttcatcgccaatggagtgagggattcagctgtgctcaaggttaaacctgctgtattcaag
ttcgtccctctgtcagacctggaaagcagtaagagagtggaaaccggtgacgccattgtg
ctctactgtgaggtcacccatcctttcgctaaggtaacctggtttaaaaatggtgagaaa
ctccaagtgagcgatgggctaaacatccaatcagacgggaagatgaggaggattgtgata
cagtctgctgaagcatccgactctggagtttacacatgtcaaacttcaggggatgtcatc
aaattcaacgtggacgttgaagggcctccagtagagttcagtccagcctctcaggaagaa
cttcataagaacagcatggaattagatcctgtggttctgctttgccacgtctccagagaa
gacgctgaagctgcttggtataaagatggttgtgagattcgggctagtgacaacattacc
ctgcaggtggagggcaccatgaggaggctaatcatccgatctgcagaggcttcagatgct
ggacattacacttgcaagtctgggaacaacagcttagaatttacagtcaatgtcagagag
cccccagtgacaattgttgaacctaaagatgacattgtgatgacatgttacatatcagag
gagatcaacttgcagtgtgagttatctcggtccaacgggaaggtctgttggtttaaggat
ggtcaggaggtgcaggaaagcgacaatatccagctaagatcggagggaccttacaggagg
ctgaccattctctgtggctcaggagcggatagtggagagtatgtctgtgaaacagatgga
gactctatcttcttccagataactgttacagagcctcctgtaagaatcatctctcattgt
gaacccgaggtggaactcacccatgttgcaccagagagactggaactctgctgtgaagtg
tcccaggcggatgctccagttcgatggtacaaagatagtttagaggtagaagagagcccc
aacttgatactggaagtagatggggcccaacgacggctagttatacctttaacaactgtc
agtgacacaggagagtatatatgtgacactgaaaatgactcagttgcctttcttgttaat
atcacagagccaccagtgatgctaagtcgacccaaaaacttgccagacaaactggaaagt
tttgctggtaaaccaatcgttctagagactgaggtgtcacgtctaacagcagatgtcaag
tggctactcaatggcaaagaaatagagcaaagtagtaatatcgcaatcacagaagatggg
atctttcgtcgtttgaccatcaactctcccactccaaacgattctgggaaatacacttgt
gacgctacagatgataaaattgatttccaggtgaaagtttcagagccgcctgtgaagatc
ttgagaaagtgtgagatcaagacagatctaaagtttctagtttcagatgacattgttctt
gagtgcgagatctctcaagctaatggaaacagcaaatggtacaaggatggctgtcaagtt
cagggtgatgaaaggttctgtgaagaggaggaaggtgcattccggtcgttggtaatcctt
aatgcagaactcaaagattcaggggaatacttcctagatgttggggatgacagtatcagt
ttctacgttaaagtagaagagcctcccgtaagcattgtaggaaactcatgcgaccctgat
taccaggaattgatgggaggtgatgacctgatattggcctgtgagttgtcccgtgctaat
gccccagtgcagtggtactgtaatgacaggcttctcaccagcgattcccgtaccatcatt
gaatgctatggaagtctgagaaaacttattatttcaaacatccagccctcggattctgga
aagtatgtgtgtgatgcggtgaacgacaagatggtcaacataatccgtgttcaagaacct
ccggtaacttttgtcaacaaggaagatgatgtggttgtgacaggttacgaagctgagagc
gtgactttaatgagctatgtgtccaaagaaagtgcggttgtacgctggcttaaagactgg
acaccagttgaaggcgaacggtttcgagaactcatggacggccataaacggagtcttacc
atccaacctttaaggcggtctgatgctggtgaatacacctgtgatgtcaacaatgaccag
atgcacttcagtctactagtgaaagaaatgaggataaaatttgtgcgaccactctatgac
actgtggctcatgctgacggcatggtgacactgcactgtgaggtgtgcaaaccaaaagca
gatgtgcaatggcttaagaatgggatagaagtagttggaagcaggagattctccattcga
gcagatggtgtcgagagaagcttgaccatccatcgtttaactcacgaggacgcagggcag
tatgcctgtgaatccagagatgatcggaccgccgcaatgctaagagtggagatgcctcga
gttgttgagtttcttaccgaacttcacaacacaactgtgctagaaggagaagatgccacc
tttaaatgtgttgtttctcctgaggatgtttccttgctttggcttatggacaacgaacca
atgtctataggggatcgcttccaagcgagtcgaaatggattgtgccacaccttggtgatt
aaaaagtgccagatgatagactgttccaggatcacagcagaagctgaaggaaaaatgagc
aaggctagtctcaaagttcaggaagctcaagtcatgttcaccaagaaaatggaacctgtg
acagcagaggagtttgaagaggctaccctagagacagaaatcagcctggagactggtgag
gttcagtggatgaggcaaggggtagtcatccagtctggtcctcgtcataccctggcccag
aatggctgtaaaagaagcttaactatccacaagctgaacctgtcggaccgaggaacatac
cgctgcgagaccctgcatgatcggacacaggtcaaactcaatgtagaaccccgaaagatc
tccatctgtaaaggcctaacggatcaagaaacatttgaacgagagactgcctcctttgag
gtggagctctcccatatagacgtggaaggcatctggcagaaagatggcatccgcgtaaag
ccaaacaaccagtttagggtgagcatcaacgggctagtccatagccttaccctgacaaac
ttaactctggaggacacaggcaccatcgtcttctcggctgaaggagcgcgatcgactgca
aggctcataattaaagagacccctgtggccatcctgaaaccactggttgatgttcgcgtg
gaagaagaatttccggtcactcttgagtgtgaattttccagacaaaatgtcgaagtcaga
tggcttaagaacggaaacgagctgaagccagggaaggaccatcgaatctattccatgggt
cgaaagcggttctgccagatccttcaatgctctgttgctgactctggttcctatacatgt
gacacaggcgaaataagcaccttctgttctttggaagtttatgagcacaagttggagata
gtacaggatcttgaggacctttacatccaggaagaccagaatgctgtgtttatgtgcgag
ctctctctggaggatgtggctggggagtggtacaagaatggtcacaagatcagacccagt
agcaccacaaagatccgcacagaagggcccaaacacttcctgctgatatgcaacgttaaa
gctgaggatgctggagatgtccaatttgtagcaagggatgtcaagtcaacagcctccctt
gaggtagaagagctcccagtttccattgtaaaaccactgcgagacagaacagccctggag
acccaccgagtgatccttgaatgcaccgtttcctcccctcgctgcagtgcaacctggtac
aaaggcaaacaggaactacatccttcagacaggatggagattataacagaagactgttcc
cataaactagtaatccaccaggttgctgtggaggacgagggaacttacagtattgaggtt
ggagagcacacatccaaagcaaaactgatggttgaagccaaggctctcgtgatggtgaaa
ggacttgagaatgtccaggtgacagagccggagtcagcttctttccagtgtgaagtctct
gttgacatcaacaaacctccagtttggacgttaaatggagtgacccttcgatcaggccct
gccgtccgtctggaagaccacgggacagtccacaaactcactctgagggacacaagcgtg
gacatgagtgggacggtcaagttcacattgggcaaagccaaaagcagtgccacgtttact
gtgattggaaagtag

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