Xiphophorus hellerii (green swordtail): 116716052
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Entry
116716052 CDS
T07363
Symbol
slitrk5
Name
(RefSeq) SLIT and NTRK-like protein 5
KO
K25836
SLIT and NTRK-like protein 5
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116716052 (slitrk5)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_9
LRRNT
LRR_LRWD1
Hepsin-SRCR
Motif
Other DBs
NCBI-GeneID:
116716052
NCBI-ProteinID:
XP_032412689
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Position
24:complement(9818382..9830088)
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AA seq
874 aa
AA seq
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MHIWILKIILLIASSLRLVEMYDNYGEICRSLCMCDEKEGILTVSCENRGIIRLTEISPV
QFPKYHLLLTGNLLKKLSVNDFINYTGVTILHLGNNDISEIESGAFNGLQGLKRLHLNNN
KIDLLRDDTFTGLESLEYLQIDYNDITTVEPNALSKLHQLTVMILNDNLLSALPSNIFRN
VPLTHLDLRGNRLKMFPYIGLLEHMDKVVELQLEENPWNCSCELIALKAWLESIAYTALV
GEVVCETPFRLHGRDLDEVSKQELCPRRPVEDTVRPAPPSSTNGYYQTTPSAVTASVTSS
AVFRSSSRPTKGTRQFNRTRLKPTSRLPGGNPYNYGPIIAFQTKSPVPLDCPTACTCNLQ
ISEIGLNVNCQERKIESISDLKPKPYNPKKMYLTGNYIPVVRRSDFVDATGLDLLHLGNN
RISVIHDRAFGDLTNLRRLYLNGNLMDRLTGEMFFGLQNLQYLYLEYNKIKEVEAGTFRY
LPNLQLLFLNNNLLKTLPMGIFSSLSLSRLNLRNNQFQNLPVSGVLDQLKLLVQIDLFEN
PWDCSCDIVGMKIWLEQLSAGTVVNEVVCETPIRHKGADLRSIQSEQLCPDYTDSYVSPT
PPTEEPMDDHVVTTNPPQKFSPSSSTVPLSVLILSLLLVFIMSVFVAAGLFVVVMKRRKK
SQSDRTSTNNSDVSSFNLQYSLYSNRSCPKVKAPAGHVYEYIPHPMGHMCKNPIYRSREG
NTVEDYRDLHELKVTYRSTPDEERDSSTLRSPAYSVSTIEPRDNPSPIQDADHFFRGILE
PDKQSPHQSIPSIPAANLEYKYTGPVSYTYNPNFDVRRQFLHPERIRETMLYSTAPSTVY
VEPNRNEYLELKAKLQSEPDYLEVLEKQTTFSQF
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgcatatctggattctaaaaataatccttctgattgcatcatctctgaggctggtcgag
atgtatgacaattatggggagatctgccggagcctgtgcatgtgcgacgagaaggagggg
atcctgacggtgagctgcgagaaccgggggatcatcagactgacagagatcagcccggtt
cagttcccgaagtaccacctcctactgacagggaacctcctgaagaagctgtcagtcaat
gatttcatcaattacaccggggtaaccatcctgcacttggggaacaatgatatctccgag
atcgagtcgggtgccttcaacggactccagggattaaaaaggttgcacctgaataacaac
aagattgaccttctgagggacgacactttcacagggctggaaagtttggaatacctacaa
attgattataatgacattacaactgtagagcccaatgccttgagcaaactgcaccaactg
acagtgatgattttgaatgataacttactttctgccctcccctcgaatatattccggaat
gtcccccttacgcacttggacctgagggggaaccgactaaaaatgttcccctacattggc
ctcctggagcacatggacaaagttgtggaattacaactggaggaaaatccgtggaactgc
tcctgtgagctcattgctctcaaggcttggctggagagcatagcctacacggctctggtc
ggggaggtggtgtgcgagacgcctttcaggctgcatggcagagacctggatgaggtgtcc
aagcaagagctgtgcccgcggagacccgtagaggacacggtcaggcctgcaccacccagc
agcaccaatggatattatcagaccacaccttctgctgtcacggcctctgtcacttcatca
gctgtttttaggtcctcctccaggcctaccaagggcacacggcaatttaacagaactagg
ttaaagcccacttctcggttaccgggcggtaacccgtataactatggccccatcattgct
tttcagaccaaatctcctgtgcctttggactgccccactgcctgcacatgtaatctgcag
atttctgaaattgggttaaatgtcaactgccaagagagaaagattgaaagcatttctgat
ctaaaacccaagccatacaaccctaaaaaaatgtatctcactggaaattacatccctgtg
gtgcgaagatctgattttgtcgatgccactggattggatttgcttcacctgggaaacaac
aggataagtgtgatccatgacagggcttttggggatttaaccaacctccgtcggctgtat
ttaaatggtaatctcatggacaggcttacaggggagatgttttttggcttgcagaacttg
cagtacctttatttagagtacaacaaaatcaaggaggtggaggctggcacttttcgctac
ctgcctaatctccagctgcttttcctcaacaacaacctcctcaaaactttacccatgggc
atcttttccagcctctccctgtctcgacttaatctgcgtaacaaccaattccaaaacctg
cctgtgagcggtgttttagatcagctcaagttgcttgtgcagatagatctgtttgaaaac
ccctgggactgttcttgcgacatagtggggatgaagatatggcttgagcagctcagtgca
ggcacggtggttaatgaggttgtgtgcgagacgcccatacgccacaagggggcggatctg
cgttccatccagtctgagcagctgtgcccagattatactgactcatacgtctcaccaact
ccccccacggaggagcccatggacgaccatgttgtcacaacaaaccctcctcagaagttc
agcccctcaagcagcacagtacccctctccgtcctcatccttagcctcttgcttgttttc
atcatgtctgtttttgtggcggcagggctcttcgttgtggtgatgaaaaggcgcaaaaag
tctcagagtgaccgcacgagcaccaacaattcggacgttagctcctttaacctgcaatac
agcctctacagcaatcgctcctgccctaaagtcaaagcccccgccggtcacgtttacgag
tacattccccaccccatgggccacatgtgcaaaaatcccatttacaggtcacgggaagga
aacacggtggaggattaccgagacctgcacgagctcaaggtgacatacaggagtacccct
gatgaggagagggatagtagcacgttgaggagtcccgcgtacagcgtcagcaccatcgag
ccacgtgacaacccctcccccatccaggatgcagaccactttttcaggggcattctggag
cccgataagcagtccccgcatcagtccatcccatccatcccagcagccaatttagagtac
aagtacactgggcctgtgtcgtacacgtacaacccaaatttcgatgtcaggcggcagttc
ttgcacccggagaggataagagaaacgatgctctacagcacagcacccagtactgtttat
gtggagcccaacagaaacgagtatttggagctaaaagctaaactgcagtctgagcctgat
tacctcgaggtccttgagaaacagaccaccttcagtcagttctga
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