Xiphophorus hellerii (green swordtail): 116716071
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Entry
116716071 CDS
T07363
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2-like isoform X1
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116716071
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
116716071
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos2
Motif
Other DBs
NCBI-GeneID:
116716071
NCBI-ProteinID:
XP_032412727
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Position
24:17535746..17542961
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AA seq
266 aa
AA seq
DB search
MEGEKKSPGCREEQLSLISWNIDGLDGDEQPERARSLCSYLTEYSADVVLLQEMVQPYMR
FMHRRLGDEYAFIEGGQDGYFTMMLLKKSRLRLLDHHIVNFPKSRMMRNLLVAQVEFGGQ
KLSLMTSHFESCKANSAERMRQLRQLMKMMSRAPDDQTVLFGGDTNLRDHEVAAVGLPGN
IVDLWEELGEPEKCRYTWDTRANTNKEIPFKCRFRFDRVYLRRAGVDGVPLLEPRSMALI
GLEKLRCGMFTSDHWGIYATFSVTHT
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggagggagagaagaagagcccaggctgcagagaggagcagctgtcgctgatcagctgg
aacatcgacggtctggatggagacgagcagccagagagagccaggagcctctgctcctac
ctcacagaatactcggctgacgtggtgcttctgcaggaaatggtgcagccctacatgcgc
ttcatgcaccgacgtctgggagacgaatacgccttcatagaaggtggacaggacggttac
ttcaccatgatgctgctgaagaagtcccgcctcaggctgctggatcaccacattgtaaac
ttcccaaagtctcgcatgatgagaaacctgctggttgctcaggtggagttcggaggccag
aagctgagtctgatgacgtcccacttcgagagctgcaaggccaactctgcagagaggatg
aggcagctgaggcagctgatgaagatgatgagccgggctccggatgaccagacggttctg
tttggaggggacaccaacctgagggaccacgaggtagccgccgtggggcttcccgggaac
atcgtggacctgtgggaggagctgggagaaccggagaagtgccgttacacctgggacacc
cgggcaaacaccaacaaagaaataccgttcaagtgccggttccggttcgaccgggtgtac
ctccggcgggcgggtgtggacggcgtccccctgctggagccccgcagcatggcgctgatc
ggcctggagaagctccggtgtggcatgttcaccagcgaccactgggggatctacgccacc
ttctctgtgacgcacacataa
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