Xiphophorus hellerii (green swordtail): 116716247
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Entry
116716247 CDS
T07363
Name
(RefSeq) aryl hydrocarbon receptor-like
KO
K09093
aryl hydrocarbon receptor
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116716247
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
116716247
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GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
PAS_9
bHLH_HIF1A
bHLH_NPAS4
PAS_4
Motif
Other DBs
NCBI-GeneID:
116716247
NCBI-ProteinID:
XP_032413055
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Position
24:15904400..15924412
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AA seq
849 aa
AA seq
DB search
MNANMYAGRKRRKPAQRGVKPVSTEGTKTNPSKRHRDRLNSELDRLARLLPFPEEVISSL
DKLSILRLSVSYLRTKSFFSEALKHQPPNGISKSSDGNGGGTTPGAAEGAISEGELLLQA
LNGFVLVVTSEGNIFFCSHTIQDYLGFHQTDVMHQSVFELIHTEDQQEFKKNLHWALNPP
VSLEPPTDPAGEDLTSSCPVSYNPDQLPPENSSFLERAFVCRFRCLLDNSSGFLPLSIQG
RLKFLHGQSRQSGSIPPQLALFAVATPLQPPAILEIRTKNMIFRTKHKLDFTPMACDAKG
KIVLGYTEAELRVRGSGYQFIHAADMMYCAENHIRMIKTGESGLTVFRLLTKDNRWKWVQ
ANARLVYKNGKQDYIIATQRPLAEEEGGEHLRKRSMHLPFTFATGEALLYQTSHPLHGFP
DSSHGKARGSKSKKGKVDKSSSDELKPNSLLGALMSQDESVYVCQPDAESRKLYPGSRPA
ESDNLLSSTSWNIVSNREMGTCNGDGFDPLLSTLDSLSLDGGETCSNSELFSALESLGLN
ADDLELLLLDERMMQVELDPNRVPTLTDLLTNNEILTYVHDTLQSELENGVPSSDPDSAP
QQPCLMPEASLDPPTFRQPIVQLSQQMQQHIQAASHPAGLSDSLWVDHHLQTPLTGPQLD
AEHLHPHLESPWQLQINTESTASSSFQNGSYIPNQNTTFPLNLNTSVPGYSLDVRTTLLN
GEATLDVHQHLDGMTTAATPAHLGQQKQNPASCVSHGAAHLGQQKQNPASCLSHGAAHLE
QQRLSLPNLSCSVFDPAADGKVENGCLLSAPSVGYVRTCLIPGRNAVEAVTGPDEVSDLQ
DPQKSGFFL
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaaacatgtacgctgggaggaagcgcagaaaaccggcgcaaagaggggttaaa
cccgtttccactgagggaaccaaaaccaacccatccaaacggcaccgggaccggctgaac
tcagaactggaccggctggccagactgctgcccttcccagaggaggtcatctccagcctg
gacaagctgtccatcctgaggctcagcgtcagctacctgcgcaccaagagcttcttctca
gaggcgctgaagcaccagcctcccaacggcatcagcaagagcagcgatggaaacggcggc
ggcacgacgccgggagccgctgagggcgccatatcagagggcgagcttctgcttcaggct
ctgaacggcttcgtgttggtggtcacgtctgaaggaaacatcttcttctgctctcacacc
atccaggattacctgggcttccatcagactgatgtgatgcaccagagtgtgtttgagctg
atccacactgaagaccagcaggagttcaagaagaacctgcactgggccctgaacccgcct
gtcagcctggagccccccaccgacccagcaggtgaagatctgacgtcttcctgcccggtg
agctacaaccctgaccagcttccaccggaaaactcctccttcctggagcgagcgttcgtc
tgccgcttccgctgcctgctggacaactcctccggcttcctgccgctgagcatccagggc
agactgaagttcctccacggtcagagtcggcagagtggaagcatccctcctcagctcgcc
ctgttcgccgtggcaacgccgctgcagcctccggccatcctggagatccggaccaagaac
atgatcttcagaaccaaacacaaactcgactttacgccgatggcctgcgacgcaaaaggg
aaaatcgttctgggttacaccgaggctgagctgagagtgcgaggatccggctaccagttc
atccacgccgctgacatgatgtactgcgctgaaaaccacattagaatgataaagacgggt
gagagcgggctgaccgtcttcaggctgctcaccaaagacaaccgatggaagtgggtccag
gccaacgcccgacttgtctacaagaacgggaagcaggactacatcatcgccacccagagg
cctttggcggaggaggaaggaggagaacacctgaggaagcgatctatgcaccttcccttc
acctttgccaccggagaggctctcctgtaccaaaccagccacccgctgcacggattccct
gattcctcccacggcaaagccagaggcagcaagtccaagaagggcaaagtggacaagagt
tcctcggatgaactgaagcccaactcactgctgggggcgctgatgagtcaggatgagtct
gtgtacgtctgccagccggatgcagagtctcgaaagttgtaccccggcagcaggcctgct
gagtccgataacttgttgagcagcacctcctggaatattgtctccaaccgggagatgggg
acatgcaacggagacggctttgaccctcttctgtcaacgctggactctttgtcactggat
ggaggggaaacttgctctaacagtgagctgttcagtgctctggagagtctgggcctaaac
gcagacgacctggagctgctcctgctggatgagcggatgatgcaggtggagctggatccc
aaccgcgttcccactctgaccgaccttctcaccaataacgagatcctcacttacgtccac
gacactctgcagagtgagctggagaacggagtcccgtcttcagaccctgactccgccccc
cagcagccatgtttgatgcctgaagcctctttggacccccccaccttcaggcagcccatc
gtccagctgtcgcagcagatgcagcagcacatccaggctgcctcgcatcctgctggttta
tctgacagtctctgggtggaccaccatcttcagactccactaactggtccacagctggac
gctgagcatctacacccacatctagagtcaccatggcaactgcagataaacactgagagc
acagcctcatcaagcttccagaacggatcttacattccaaaccagaacacgactttcccc
ttgaacctgaacactagcgtcccaggttactctttagatgtacgcaccactctgctgaac
ggcgaggcaacgctggatgttcatcagcatctggatgggatgaccacagcggccacgccc
gcacatctgggccagcagaaacagaacccagcttcctgtgtgtcccacggagcggcacat
ctgggtcagcagaaacagaacccagcttcctgtttgtcccacggagcggcacatctggag
cagcagcggctcagcctgccaaacctgagctgcagcgtgttcgaccccgcagcagacggg
aaggtggagaacggctgcctcctcagcgcccccagtgtagggtacgtccggacgtgtcta
attcctggaagaaacgcagtggaggctgtgacgggccctgacgaagtctccgacttacag
gacccccagaagtctggattcttcctctga
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