Xiphophorus hellerii (green swordtail): 116716449
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Entry
116716449 CDS
T07363
Name
(RefSeq) contactin-associated protein-like 4
KO
K24337
contactin associated protein-like 3/4
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
116716449
Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
116716449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
EGF
F5_F8_type_C_2
Motif
Other DBs
NCBI-GeneID:
116716449
NCBI-ProteinID:
XP_032413175
LinkDB
All DBs
Position
Unknown
AA seq
1271 aa
AA seq
DB search
MSPRSQILAGIIAFVASALLGSRGTHGEEVCDNPLVSNLPPSSFRSSSQLSASHGPGFAK
VNRREGAGGWSPLWSDKYQWLEVDLQRRTQITAVATQGRYGSSDWLMSYLLMFSDTGHNW
RQHRQEDSLGAFPGNSNADSVVQYKLDQPVIARYLRLIPLDWNPTGRIGLRLEIYGCRYT
SEVAHFDGRSNLVYRLSARTSWTARESISLKFKTLKNSGTLLHANGQRDHSLNLALERGK
LLLHHQQDVSSGSGGKLLVSLGSLLDDQHWHHVKLERLGSHLNLTVDKNMQQVQVPAELS
HWHIHTLSVAAVQSHGLQTPILPNRNFHGCLENLLYNDLNLIKLAKQNSPQVAALGNMTF
SCSEPVFVAVTFTDSHSFLQLPVLTSWLSGVVSIALQFRTWNKAGLLLTFDLQQQEGSVF
VYVSEARLRLQISKEGNILLELSTGAGLNDGQWHSVELNSMENRLSITVDRDEGATAHTS
IPLLPTADSQLFFGGCPAQRGGLSCRNPIQGFQGCMRLLKLDGQTVDLIKVQERRLGNYG
DLKIDMCGIIDRCLPSHCEHGGRCSQSWSNFHCNCSDSGYGGATCHSSKYEQSCEVYKHK
GDSSGHFHIDVDGSGPIKPQLVYCNMTEDQTWIIIQHNNTELTPVQTSADTNQHFVSFLY
PSEEKQLSAIISQSEHCEQELSYHCRKSRLSNSLDGTPFSWWVGGPASGQIQNFWGRALP
GSQQCACGLQDNCLDSSFYCNCDADYDLWTEDSDLLTHKESLPVRSLVLGDIHRPGSEAA
YRVGALRCHGDKNFWNAAFFDKETSYLHFPTFHGELNADISYLFKTTSSSGLFLENLGIK
DFIRIELRSSTEVVFSLDVGNGPLEVKVRSDLPLNDNRWHSVRAERNVKEALLRVDDLPA
AVREAPADGFIHLQLNSQLFIGGTASRQKGFLGCIRSLQLNGVTLDLEERARITPGVRPG
CPGHCSSYAALCQNQGRCVERASGFSCDCSHSAYTGAFCHKEVSGSFEPTTSITYIVKEP
YEASKNSSSLHSSIYSDITLRGEDVSLSFRTSQSPAPLLYVSSFYRQYLILLINKHDELE
VRYKLHSNRDEEVLSSRVMNLADGRLHTVTIRRQADTVAMQIDQNAREEFNVTADREFNV
KSIILGRVPEILPLGPRSGDQEGGPGPNPDPATVRPSIFFQPRPTGVRRARNPIQQNQRG
NRQTWTVLTRAARAKTRAGTTATPEDQILLVLVQKADGPQYHQHLTLQFSSGRIFELQLD
GVWMRERLIDQ
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgaggagtcaaatactcgctgggattatcgcgtttgtcgcctcagcgctgctt
ggatcacgcgggacacatggagaagaagtttgtgacaaccctctggtgtccaatctgccg
ccgtcgtccttcaggagctcctctcagctgtcagccagtcacggaccgggcttcgccaaa
gtcaacagaagagaaggagctggaggctggtctcctctctggtcagataagtaccagtgg
ttggaggtggatctgcagagacgaacccagatcaccgccgtggccacgcagggccgctac
ggcagctctgattggctgatgtcctacctgctgatgttcagcgacacgggacacaactgg
aggcaacaccggcaggaagacagcttgggggcgtttccaggtaacagcaacgcagactct
gtggtccagtacaaacttgatcagccagtgatcgcccgctaccttcgcctgatcccactg
gactggaaccccaccgggcggatcggactccgcctggaaatatacggctgcagatacacc
tctgaggtggcacattttgatgggagaagcaaccttgtctacagactgagtgccagaacg
agctggacagcgagggagagcatctctctgaagtttaaaaccttgaagaactcaggaacg
ctgcttcatgcaaatggacagagggatcacagcctcaacctggcgctggagagaggaaag
ctgctgctccaccaccagcaagatgtgagttcaggttctgggggcaaacttctggtttct
cttgggagtctgctggacgaccaacactggcatcacgtgaagctggagcggctcggctct
cacctcaacctgacggtggataaaaacatgcagcaggttcaagtcccagccgagctcagc
cactggcacattcacacgcttagtgtggcagctgtccagagccacggactccaaactcca
atcctgcccaacaggaacttccatggatgcctggaaaaccttttatacaacgaccttaat
ttgatcaaactggccaaacagaacagcccacaggtcgctgcactgggcaacatgaccttt
tcttgcagcgagccggtttttgtcgccgtgacgttcactgactctcacagcttcctccag
ctgcctgtgctgacatcatggctgtcaggggtcgtttccatagcgctacagttcaggacg
tggaacaaggcagggctgctgctgacctttgacctccagcagcaggaaggctcagtcttc
gtgtatgtcagtgaagccaggcttcgccttcagatcagtaaagagggaaatattctcctg
gagctcagcaccggtgcgggtctgaatgacggccagtggcattctgtggagctgaactcg
atggaaaaccgtctgagcatcacggtggacagagacgaaggggccacggctcacaccagc
atccctcttcttcccacggcagacagtcagctcttctttggcggctgtcctgctcagaga
ggcgggctgagctgcagaaacccgattcaggggtttcagggatgcatgcgtctcttgaag
ttggacggccaaacggtcgatttgataaaagtgcaggaaagacggctgggaaactacggc
gacctgaagattgatatgtgtggcatcattgacaggtgcttgccgagtcactgcgaacac
ggaggaagatgctctcagtcctggagtaacttccactgcaactgctccgacagcggctac
ggaggagccacctgccacagctcaaaatacgaacagtcgtgtgaggtctacaaacacaaa
ggcgactcatcaggtcactttcacatcgacgtggacggcagcggaccaatcaaaccccag
ctcgtttactgcaacatgacagaggaccagacgtggattataatccagcataataacaca
gagctgactccagtccagacctccgctgacactaaccaacacttcgtcagcttcctgtat
ccgtctgaagagaagcagctttccgccatcatcagccaatcagagcactgcgagcaggag
ctttcctatcactgcaggaagtcccgcctctccaacagcctggatgggactcctttcagc
tggtgggtcggcggcccggcttcgggtcagatccagaacttttggggcagagctttgccc
ggcagccagcagtgcgcatgtggtctgcaggacaactgcctcgactcgagcttctactgc
aactgtgatgctgactatgacctatggactgaggactctgaccttctgacccataaggag
agcctcccagtccggtcgctggtgctgggagacatccaccgtccgggttcagaggctgcc
tacagggtgggggctctccgttgccatggagacaaaaacttctggaatgctgcgtttttt
gacaaggagacgtcgtaccttcacttccccacctttcatggagagctgaacgcagacatc
tcctatctgtttaagaccacgtcttcctctgggcttttccttgaaaacctcggcatcaag
gacttcattcgaatagagctcaggtcttccacagaggtcgtcttctctttggatgtgggg
aacggacctctggaggtcaaagtgcgctccgacctcccgctaaatgacaaccggtggcac
agcgtgagagctgagcgaaacgtgaaggaggctttgctgcgcgtcgacgacctgcctgct
gccgtacgagaagctccagctgatgggtttattcatctgcagctcaacagccagctattt
ataggaggcaccgcgtcacggcagaaaggctttctgggctgcatccgctctctgcagctg
aacggcgtaacactggacctggaggagagggcaaggatcacacctggcgtccgacccggc
tgccccgggcactgcagcagctacgcagcgctctgccagaaccagggccgatgtgtggaa
agggccagcgggttctcctgtgactgcagccactctgcctacactggagccttctgtcac
aaagaagtttcaggcagctttgagccgacaacatccatcacatatatcgtaaaggagcca
tatgaggcgagcaagaacagcagctctctgcactcatccatctactcggatatcacactg
agaggagaagacgtctccctgagctttaggaccagtcaaagccccgcgccgctgctctat
gtcagctctttttacaggcaatacttgatcctgctcatcaataaacatgacgagttggaa
gtgaggtacaagttgcacagcaacagagacgaggaagtgttgagcagccgagtcatgaac
ttagctgatggccgtctgcacactgtgaccatcaggcggcaggcagacactgtggcaatg
cagatcgatcagaatgccagagaggaattcaacgtgacggctgaccgggagtttaacgtt
aaatcgatcattctggggagagttccagaaatccttcctctgggcccgcgctccggagac
caggaaggaggtccaggtcctaacccggaccccgctaccgtccgtccatccattttcttc
cagcctcgtcctactggggtcagaagggcaagaaacccaattcagcagaaccagagaggg
aaccgccagacatggacggttctgacccgagcagcacgagccaaaacccgagctgggacc
acagcaacacctgaggaccagatcctgctggttctggtccagaaagcagatggacctcag
taccatcagcatctgactctccagttcagttctggacgaatctttgagctgcagcttgat
ggagtctggatgagggagagactgattgatcagtga
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integrated database retrieval system
