Xiphophorus hellerii (green swordtail): 116716615
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Entry
116716615 CDS
T07363
Symbol
stag3
Name
(RefSeq) cohesin subunit SA-3
KO
K06671
cohesin complex subunit SA-1/2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116716615 (stag3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116716615 (stag3)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
116716615 (stag3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
YqaH
Motif
Other DBs
NCBI-GeneID:
116716615
NCBI-ProteinID:
XP_032413329
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All DBs
Position
Unknown
AA seq
1213 aa
AA seq
DB search
METGSSAFESFEELDLSSESGSIYESQTKARKRSKQSLPAPQPPKRPRRNAALRVTSSTS
SSPIPDPPDPSQQPSPSQGTSRKLSSRRVTSEDSQGISAKDIYDAVCSGKSAMVTVVEEW
LCSYKQSREEGLLVLINFIVQSCGCKGVVSREMYESMENAEIISTLTKEFNEDSVNYPLI
TSGSQFKRFKAGLSEFVRVLVHSCRNSLVYDEFLFPSLLALLTGLSDSQVRAFRHTSTLL
AMKLMTGLVDVAVAVSVQLQTTQRRCDIENSKSPCDRDSGRLEELKTAIRELQENREELS
FMMNSIFRGVFVHRYRDRLADIRATCIEELGLWLKTDPDNFLNDRCLKYLGWTLYDKQSP
VRLQCVRALQGLYQEKEFIGRLELFTNRFKERILSMVLDKDPDVAVEVVNLLLMIQHSTE
DDLMEEESGHIYPLVYALHRGLASAAGAFLCHKLKRVITTQSQDDNDKSNNAAFFQILIS
FYIQSEFHEHGAYLVDSLWTVAGSELRDWDTMTALLLQDSGLMYEEEGALLEIMICAIRQ
AAEATPPAGRSQGKKILSMKLRKIQEQDRTRITTHFIPVLPQLLSKYSADAEKTSLLLRA
PLYFDLDMYSNTQWLEKHLDLLLSQICTIIKKHTDAAVLQACALLVSTLCSESHTFSSRA
HLVFGQLMDELTECFNSYLSDLLQGAADEDGVYNAASALKRIAALCSAKDPTRWELLDSC
MELLKNRIESLDFDTELLVAALKCAAFHLMWAKLNAVNLNPAEGDLKHLRKEVRLFCRIC
QTCLSLDQTEIRDQAFELLCDLLLLYGAVSVRGEPVLRALVHLPSDSLRAELASFLLDYV
FNGSENIELDDEDLEKKVALLHKKRNQLGGYCKLVLYGVLDLSAATNVFKHYSKYFKNFG
DIIKETVSKSKLINPIQSAKIVCLSLQQLFSEMLTESHDQQDFAEIRELARKLAMSFGVD
LHRSRKQLVALHLDGIRFAFRVPQEGEECPNLAFLEVLSEFSFKLLPQDCAQLAQFLKSE
CPSAALSWPSVELYRRSLASRTSKYKDPAEGGKADSSLDTPVTKRKRITAQGSASSTARG
SLLESSSIQSHLHTPALTSTVLKQRTKRALDSGSILTELESEDEFSCGSNMRKVKPTKRG
KASSVQTSTQQEDLDSHLNLLSLIEDDISKRAGSDISGEEEPEIEDYESDKGSEFTLPST
HHTSASFLDELFD
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atggaaactggaagctcggctttcgaaagttttgaagagttggatctgtcctcagaatct
ggtagtatctatgaatctcagacaaaagccagaaagcgaagtaaacagtcacttccggca
ccccagccaccaaagagacccaggcgtaatgcggcattgagagtgacatccagtaccagt
agcagccccatcccggaccctcctgacccctcccagcagccatcaccatcccaagggaca
tccagaaagctgtcctctagacgtgtgacgagcgaggacagccaggggatcagcgcgaag
gatatctatgatgctgtgtgctctggaaagagtgccatggtgacggtggtggaggagtgg
ttgtgcagctacaaacagagccgagaggaaggcttgctggtgctcatcaacttcattgtt
cagtcctgcggatgcaaaggtgtggtgagcagagagatgtatgaaagtatggaaaatgct
gaaattatcagcacactaacaaaggagttcaatgaggattctgtgaactacccactgatc
acctctggttctcagtttaagcgtttcaaagccggtctgtccgagtttgttcgggtcctg
gtccactcgtgtcgcaatagtctcgtttacgacgaatttctcttcccttccctgctggct
ctgctcaccggtttgtctgactcccaggtcagagccttcagacacaccagtaccttacta
gccatgaagctgatgacggggttggtggacgtggccgtggctgtatcggttcagctgcag
accacacagcggcgatgcgacatcgagaacagcaagagtccatgtgaccgagactcaggc
cgactggaggaactgaagaccgccatcagagagctgcaggagaaccgagaagaactctca
ttcatgatgaactccatcttccgtggcgtctttgtgcaccgctaccgcgaccgactggca
gacattcgtgcgacgtgtattgaggagttgggactttggctgaaaacggatcctgataac
ttcctcaatgacagatgcttgaaatatttaggatggactttgtatgacaagcaaagtcca
gtgcgtctgcagtgtgtgcgtgccctgcagggtctgtaccaggagaaggagttcattggc
cgcctggagcttttcaccaacagatttaaagaaaggattctcagcatggtgctggacaaa
gacccagacgtggcagtggaagtggtcaatctgttgctgatgatccaacacagcacagaa
gacgacttgatggaggaggagtccggccacatctaccccctggtttacgctttgcaccga
ggcctggcgtctgcagccggagccttcctctgccacaagctgaaacgtgtgattactact
caaagccaggatgacaatgataaaagcaacaatgcagcgttttttcaaatactcatctct
ttctacatccagagtgagttccatgagcatggtgcgtacctggtggacagtctgtggact
gtggccggctctgagcttagagactgggacaccatgacggctttactgctgcaggattct
ggtctgatgtatgaggaggagggggcgctcctggagatcatgatatgtgccatcagacag
gcagctgaggcaacgccaccagctgggagaagtcagggcaaaaagatcctgagcatgaag
ttgaggaagattcaggaacaagacaggactcgcattaccacacatttcatccctgtactc
ccacagctgctttccaagtactcagctgatgcagagaagacgagccttctcctcagagct
cctctttactttgatctggacatgtacagcaacactcagtggcttgaaaagcatctggac
ctgctgctgtcccagatttgcaccatcattaagaagcatacagacgctgctgtgctgcag
gcctgcgccctgctggtcagcaccctctgctcagagagccacacattctcctcccgtgca
cacctggttttcggtcagctgatggacgagctgaccgagtgcttcaactcctacctgagc
gacttactgcagggtgcagcagatgaggatggagtatacaatgcagcttcagccttgaaa
aggattgctgccttgtgcagtgccaaggacccgactagatgggagctgcttgattcctgc
atggagttgctgaaaaacaggatagaatccttggattttgacactgagctcttggtcgcg
gctctgaagtgtgcagcttttcacctcatgtgggcaaaattgaatgcagtcaacctgaat
ccagctgagggtgacttaaagcatcttaggaaagaggtgcgtttgttttgcagaatctgc
cagacttgtttgtctctggaccagactgagataagggatcaggcatttgagctgctgtgt
gacctgctgctgctgtatggagcagtttctgtccgcggtgagcctgtcctccgcgctctg
gttcacctgccgtccgactctctgcgcgctgagttggcatcttttctcctggactacgtc
ttcaacggcagtgaaaatatcgaactcgatgatgaagatttggaaaagaaggtggctctt
cttcacaagaaacgcaaccagctaggtggctactgtaagctggtcctctacggcgtcctg
gacctgtctgctgccaccaatgtcttcaagcactacagcaagtattttaaaaactttggt
gacatcataaaggagacggtgagcaagagcaagctcatcaaccccatacagagcgccaag
atcgtgtgcctcagcctgcagcagctgttctctgagatgcttacggagagccacgaccag
caggatttcgccgagattagagagttggctcgaaagctggccatgagctttggcgtcgat
ctgcatcgttcccgcaaacaactggtggccctgcacctggacgggatccgctttgcattt
cgtgtgccgcaggaaggagaggagtgcccaaacctggcgttcctagaagtcctcagcgag
ttcagcttcaagttgcttccacaggactgcgcccagctagcccagtttctgaaatctgag
tgtcccagtgctgccctctcctggccgtcagttgaactgtatcgccgttctttggcgtct
cgcacctccaagtacaaagatccagctgagggaggcaaagccgactcctcccttgacaca
cctgtgaccaaacgcaaaaggataacagctcagggttcagcgtctagcactgccagaggt
tcactgttggagagcagcagcatccagagccaccttcacactcctgccctcacttcgacc
gtcctgaaacagagaaccaagcgggcgttggacagtgggagcatcctgactgagctggaa
tcggaggacgagttctcctgcgggtccaacatgcgaaaggtaaagccaaccaaacgtgga
aaagcttcttctgtgcagacgtctacacagcaagaagatctggattctcacctcaatttg
ctttcactgattgaggatgacatttcaaaaagggctgggagcgacatttcaggagaagag
gagcctgagatagaagattacgaaagtgacaaaggatctgaatttacactgccatcaaca
catcacacctcggccagcttccttgatgagctctttgactga
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