Xiphophorus hellerii (green swordtail): 116716627
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Entry
116716627 CDS
T07363
Symbol
bod1l1
Name
(RefSeq) biorientation of chromosomes in cell division protein 1-like 1
KO
K27262
biorientation of chromosomes in cell division protein 1-like 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116716627 (bod1l1)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
116716627 (bod1l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COMPASS-Shg1
Motif
Other DBs
NCBI-GeneID:
116716627
NCBI-ProteinID:
XP_032413340
LinkDB
All DBs
Position
Unknown
AA seq
1745 aa
AA seq
DB search
MAGLPPGDPQLVSMIVSHLKTQGLFDQFRRDCLADVDTKPAYLNLKQRVDNFVSNHLSNH
TWSPHLNKNQLRNNIRQLVLQSGMLEQGVDRIVAQVVDPKVNHIFRPQVERVVREFLSPG
SCSEEPPLPLTPAEIKTDSSVPEQPSSSASTPGSNAMSILDTITSLNQEANVRTSSAAER
GGKIQVLDEPMELVEENEQDMEVVEESDDSQEGRSLEEAVIGEIQTAEVKTESLEEQMEV
EKEQVKEEVKTEEEEAGALVQAEEKKEKPTSKVSGKVSDDKSDDEAVKSTSQAKQKARER
IKEEYSLEDSDLEGLSDITVSSVHTSDLSSFEEESDVEEQLSDSSEEGQLPPDDDDEKAE
RKHTSEEAEGEDRERKPRRKAYVHKPFLYSRYYSDSDDEVTVEERRRSAAKDKEERLLKR
QQNRERMEEKRKQKAVQAEEQDSKKAKWSDAAGVESPKAKEARKEKKVLEKKMALNRKRK
LDSRKEGDVSSKKKGEAGEISRKVEVKPLASKTPQAKLVRHLSESASSDDRLGRTSGGVS
EDSCDTKKLPDKSQTHSFILDLEQGSQEALKHRSFGKFDRLPRKERKEKERSQSDERSKL
KQKHEKKSEHLVDETLQKDSSAKVSSEEKVEKKLKVKTEKKTSGSTREGKVIEDSTDEGG
AKDARKIKGGSVEKEKIREKERSKEKEKAKLDKSAFKSDLKQLLRPDSAGSSEDRSDKEP
GSDVKKREKHSKEGLKRSKSHSEDRPGDRPKSKLDSEKERSKAESQKTQKPNTEADKDPK
KAKPAEKEKSTEKPKAKPKEEGKSSLLVKTEKKSQSPDIRSAGGSAVCKPEAAKEKKKDG
NTKEQKKVSEDAPLEKPELKISKKKLEKKDKVPEKKGESPEDKPQKDDELETSDQSAKSS
AVEMEDPPKKQHPLQDTNTESDPVAATVAASFSDDTCDALSDITPEPSEGETESRLREML
GVPAEADALLALMDVCTSAEARLPTADLKEEVTPEMELQDADMKMKEAALTLLSMDPDST
VSSTLIVQDMREESPRRSPDPQQIETTATEEEKQLTPVELNQASQQSAAAEEDALFSPEE
ASLQTEPETAASQQAASGEEEMQLSPVEVAPQVQLHPTETLLTASQQTATSEEENSPNAA
SGNETIATAFPQDPAAEEENQLSPGQTEPEVELTVTEAVAAASPQTEEVEQPSPVEAEPP
TEPVATEDSVDAPQQAVAHEEESQMSPEETASLTEFTTSEATPDATQQTAAAEEEQQLSP
VEAAPLTEHTETESLPAASHLAVDENQFSPVQTAPEAERPATETASAASQQAEKEKLVSQ
VQTASQVEMSPTEPSSSGSQLTAAEHSESKMDTIESDMSETAPPLEDESTSDKSPAHFED
EVMEAAEISADRIIIAAPADKDEALLPVVEPETGEITSSKGESLVSDCTQQISQIPSETE
QEEQSAAVLEASNEAVKGEGEENQTKDDQSETEGQTVEEDSENNQRRTDNRESESKTPEE
GDGEKMEVDISDKTESGETNSEAKLVKQISNVSSTDSQEDGRSSDVSQKEEKTERRRGRK
RKLPVKSVDGTKDEKDEQRSVEESDQEVKTPRRGRSSRNAEQLEKEQQKEAERSEKTPGR
RGRRPGAVAKEATDDNQGKTEAKAEDNSGQTASLEEAEKEESPEHKCEAQKSNESESEVS
LPSPAADEREVTGKSDSQESGDTRKQGVKRKRSEETEESGEEAEAQQGLAEDEQEQSEEQ
DDKNE
NT seq
5236 nt
NT seq
+upstream
nt +downstream
nt
atggctggtttgcctccgggggacccgcagctggtctcaatgatcgtcagtcatttaaaa
acacagggactcttcgaccagttcaggagggactgtctagcagacgttgatacaaagcca
gcttacctgaacctgaaacaaagagtggacaactttgtctccaatcacctctctaatcac
acatggagccctcatctgaacaaaaaccagttgagaaacaacatccggcagctcgtcctg
caatctggaatgctggagcagggggtggacaggattgtggcccaggtggttgatcccaaa
gttaatcacatcttcaggccgcaggtggagagggtggtccgtgaatttctgtctccgggc
agctgctccgaggagccgccacttcctctgacaccagcagagatcaagacggacagcagc
gttcctgaacaaccttcatcatcagcttcaactcccggcagcaacgccatgtccatcctg
gataccataacttctcttaatcaggaggcaaacgtcaggaccagctcagcagccgaaaga
ggcggtaaaatccaagttctggatgaacccatggagctggtggaggagaacgagcaagac
atggaggttgttgaagaaagtgacgatagccaggaaggaaggtcactggaggaggcagtg
ataggagaaatccaaacagcagaagtgaagacggaaagcttagaagagcagatggaagtg
gaaaaagaacaagtaaaagaggaggttaaaactgaagaggaggaagcaggagctttggtg
caagcagaggaaaagaaagaaaaacctacaagcaaagtgagtgggaaggtctcagatgac
aagtctgatgatgaggcagtgaaatctactagtcaagccaagcagaaagccagagagcgg
ataaaagaggaatactctttggaggactcagacctcgaaggcctgagtgacatcacggtg
agctccgtccacaccagcgacctttcctctttcgaggaggaaagtgacgtggaggagcag
ctctccgattcttccgaagagggccagcttccgccagatgatgacgatgagaaagcggag
aggaaacacaccagtgaggaagcggaaggcgaagacagggagcgtaaaccccgccgtaaa
gcatatgtccacaaacccttcctctactctcgttactatagcgactcggatgatgaggtt
actgtggaggagcgtcgcagatctgctgcaaaagacaaagaagaaaggctgctgaagagg
cagcagaacagagagcggatggaggagaagcgcaaacagaaagctgtgcaggctgaagag
caagacagcaaaaaagcaaagtggtctgacgctgctggcgtggagagccccaaggcaaaa
gaagcccgcaaagagaagaaggtcctggagaaaaaaatggcgctcaacaggaagaggaaa
ctagactcaagaaaagagggagatgtttcgagcaagaaaaaaggagaagcaggagaaata
tccaggaaagtggaagtgaaacccttagcctcaaagaccccacaagctaaactagtgaga
catctgtccgagtctgcatcgtctgacgaccggcttgggcggacgagtggcggtgtctcc
gaagattcctgcgacacaaagaagcttcctgacaaaagccagactcactccttcatcctg
gatctggaacaaggctcccaagaggcactcaagcatcgctcgtttgggaaatttgaccgt
ctgcctcgcaaagaacgcaaggagaaggagcgcagccagtctgatgaacgttccaagctc
aaacagaaacacgagaagaaatctgagcatctggtggatgaaactctgcagaaggacagc
agtgctaaagtttcctccgaagaaaaagtcgaaaagaagcttaaggtcaaaactgagaaa
aaaacttctggaagtactcgagaaggaaaggtgatagaagacagcactgatgaaggaggg
gctaaagatgccaggaagataaaaggagggtctgtggagaaggagaaaataagagaaaaa
gagaggagcaaagaaaaggaaaaagctaaattggacaaatctgcctttaaaagtgatctg
aagcagctgcttcgcccagattctgcaggatcctctgaggatcgctctgacaaggagcct
ggctctgacgtcaagaagagagagaaacactccaaggaagggttgaaaaggtcaaagagt
cactctgaggacagaccaggagacagacccaaatctaagctggacagtgagaaagaacgg
agtaaggcagagagccagaagacacagaaaccaaacactgaagctgacaaagatcctaaa
aaagctaagcctgcagaaaaagagaagagtacagaaaaaccaaaggcaaaacccaaagaa
gagggaaagtcttccctcttagtgaaaacagaaaagaaatctcaaagtcctgacatcaga
agcgctggaggatctgctgtctgtaaacctgaagcagcaaaagagaagaaaaaagatgga
aacactaaagagcagaaaaaagtgtctgaagacgccccgcttgagaaaccagagcttaaa
atttctaagaagaagctggagaagaaagacaaagttccagaaaagaagggcgagagtcca
gaagataaaccacagaaagacgacgaactggaaacctcggatcaatccgccaagtcttca
gctgtcgagatggaagatccaccgaagaaacaacatcctttacaagacacgaacactgag
tctgatcctgtcgctgccacggtcgccgcatccttctcagacgacacctgcgacgcttta
agtgacatcacccccgagccgtccgagggagagacggagtcacggctccgcgagatgctg
ggggtaccggccgaggccgacgccctgctggcgctcatggacgtctgtacgtcagccgag
gccaggcttccaactgcagacctgaaagaggaagtgactcctgagatggagctgcaggac
gccgacatgaagatgaaggaggccgctctgacgctgctctccatggatcctgacagcacg
gtttcatccaccttaattgtccaagacatgagggaggagtcgccgcggcgttcgccggat
ccacaacagattgaaacgactgcaactgaggaggagaagcagctcactccagtggagctc
aatcaagcaagtcagcaatcagccgccgcagaagaagacgctcttttctctccagaggaa
gcgtctcttcaaactgagcctgaaactgctgcatctcaacaagctgcatcaggcgaagaa
gagatgcagctctctccagtggaggtagcaccgcaggttcagcttcatcccactgaaact
ttgctaaccgcatctcaacagactgcgacaagcgaggaggagaattcaccaaatgcagca
agtggcaatgaaaccatagcaacagcatttccacaagatcctgcggctgaagaggagaat
cagctttctcccggtcaaacagaaccagaagttgagctcacagtaactgaagccgtggcc
gccgcgtctccacaaacagaagaggtggagcagccctctccagtggaggcagaacctcca
actgagcctgttgcaactgaagactcagtggatgcacctcaacaagctgttgcacatgaa
gaggaaagtcaaatgtctccagaggaaactgcatctttaactgagtttactacctctgaa
gcgacaccagatgcaactcaacaaactgctgcagcagaagaggagcagcagctctctcca
gtggaggcagcacctctaactgagcacactgaaactgaaagtttaccagctgcatcacac
ctagctgtggacgagaaccagttctctccagttcagacggcaccagaagccgagcgtcct
gcaacagagacggcatcggctgcctctcagcaagctgagaaagagaagctggtctctcaa
gtccaaacagcatctcaggttgagatgagtcccactgaaccttcatcatctggatctcaa
cttactgctgcagaacactcagaatccaagatggacacaattgagtcggacatgtcggag
acggctccaccgctggaggatgaatccacttcagacaaaagtccagctcattttgaggat
gaagtaatggaagctgctgagatttcagcagacagaattataatagcagcaccagcagac
aaagatgaggcattgttgcctgttgttgagccagaaacgggagaaatcaccagcagcaaa
ggagagagcctggtttctgactgcactcagcaaatctcccagatccccagtgaaactgaa
caagaagaacaaagtgctgcagtcctagaagccagcaacgaggctgtgaagggagaaggg
gaggaaaaccagacaaaagatgatcagtctgaaactgagggtcaaacggtggaggaggac
agtgaaaataaccagagaaggactgataatcgtgaatctgagagtaagacaccagaggaa
ggtgatggggagaagatggaagttgacatatctgacaaaactgagtctggagaaacaaac
tcggaggccaaattagtcaaacaaatcagtaatgtctcgagcacagacagtcaggaagat
gggaggagctcagatgtgtcacaaaaggaagagaagactgaaagaagaagaggacgtaaa
agaaagcttccagttaaaagtgtagatggcactaaggatgaaaaggatgaacagcggtct
gttgaggaaagtgaccaggaggtaaaaacacctcgcagagggcgatcttccagaaacgcc
gagcagctggagaaggagcaacaaaaagaagcggagagatcagagaagacgccgggtcgt
agaggaagacgtccaggagccgtagctaaagaggcaacagatgataatcaggggaaaact
gaagcaaaagccgaggacaattctggtcaaacagcatcactcgaagaagcggaaaaagaa
gagagccctgaacataaatgtgaagcacagaaaagtaatgaaagcgaaagtgaagtcagc
ctgccttctcctgctgcagacgaacgtgaagttactggaaagtcagactcccaggagagc
ggggacacgcgtaaacaaggagtgaagaggaagagatcagaggaaacagaggagtctgga
gaggaagctgaggctcagcaggggctggcagaggatgaacaagaacaaagtgaggaacaa
gatgacaaaaatgaag
DBGET
integrated database retrieval system
