Xiphophorus hellerii (green swordtail): 116716677
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Entry
116716677 CDS
T07363
Symbol
syde1
Name
(RefSeq) rho GTPase-activating protein SYDE1 isoform X1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116716677 (syde1)
Membrane trafficking [BR:
xhe04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
116716677 (syde1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
Motif
Other DBs
NCBI-GeneID:
116716677
NCBI-ProteinID:
XP_032413385
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MAEPLLRRTFSRLRGKERRRRKTEPKLSEPPVSSAAIQTSPSSPSLNIISSTVTAARPDS
SSPPRNHITVAKKQQWARQEASCPNSTHMTSDQWSSWISHHESGLTWSNKAHAEAVPLRD
AVISTHQEDSQASGGATEIPTPGVSAKLSGQRAYLQSLERSSRAWVLSSGKSQAPDDEFG
PLEENSSSNIWYNPIPEEEDGGAPPTEEEVWKRRDEEQEVADLRGHGCSCECPQEGANPS
VSHQVHDITEEISDCPASDSSPASLNKGGGAGSVMDRLRSPGTVRKLSLKMKKLPELRRK
LSLRSSSRTNRQTGGGGGDEPTNNNAASSPVLANQNVISRYHLDSSAPPARPRRRSSRQR
SAGKGGYLSDGDSPELLPRQQAADLTASQEAWCDVSSFQLYVGSDPPRCSQRVTGLLTVH
LLGLEEMKSSRSEDSKEIFLAIQVDGVTRARTALLTLRGHTRPLNHTFHLDLERARQLRI
VVLTPAPSAVGGAKPDQSNSAGGPNRNRVCCLGGVSIPPLFKGSRSQQLCLKLEPRGLLY
VKLTLQEKWDTQHGRDPSAPANVFGVELHHLVEKEGSAAPVPLLIQKTVAEIERRGLKVV
GLYRLCGSAAIKKELRDGFEKNSSAVCLSEDRYPDVNVITGVLKDYLRELPSPLITRTLY
QVVLEAMTLRPPLETPDPEAAQCTVRLLSCLPEPEKATLSVLLDHLSLVASFSSFNRMTH
QNLAVCFGPVLLTPTQEARRAAGRGSRGKTLGPGEEMANAVDFKRHIEALHYLLQLWPVP
INRVPVDEPSPPRSPSIPRHLQVEPRPQHCPPWLPGADGVVSRRGRGGPARLESPPPVNR
YAGDWTVCGPDLPAEDEADYDEVAGSESEGGSREEEEEEEQKEAWPPGATGGGHFVDDFM
DFDAPFNCRLSLKDFDTLIHDLDRELAKQINICL
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggccgagccgctgctgaggagaaccttctccaggctgaggggcaaagagaggaggcgc
aggaagacggagcccaaactgagcgagcctccagtcagctctgccgccattcagacgtct
ccatcatcaccatcactgaacatcatatccagcactgtaaccgccgcccgccctgactcc
agctctcctcctcgaaatcacatcacggttgctaagaaacagcaatgggcgcggcaggaa
gcttcttgtcctaactccacccacatgacctctgaccagtggtcgtcatggatatcccac
catgaatctgggctgacctggagcaacaaggcgcatgctgaagccgtgccgcttagggac
gcagtcatcagtacgcaccaggaagactcccaagcttcagggggcgccactgagattccc
accccaggagtcagcgccaagctgtctggccagcgggcgtacctgcagagcctggagcgg
agcagccgagcatgggttctgtcttcaggaaagtcccaggctccggatgatgagttcggg
cctctggaggagaacagcagcagcaacatctggtacaaccccatcccagaggaggaggac
ggaggagccccaccgacagaagaggaggtatggaagaggagggatgaagagcaggaggtc
gctgatctcagaggacacggttgtagctgtgagtgcccacaggagggcgccaatccaagc
gtcagtcatcaggttcatgacattactgaagaaatctcagactgccctgcctcagactca
agccccgcctccctaaacaaagggggcggagctgggagtgtgatggacaggctgaggtct
cctggtactgttcggaaactctctttaaaaatgaagaaacttcctgaactccggcgaaaa
ctcagtctacgttcatcttcccgtactaaccgccagaccggcggaggaggtggggacgag
ccaaccaataacaacgcagcatcatccccggtgctggccaatcagaacgtcatcagcagg
taccatctggacagctccgcccccccagcgcgtcctcgccgtcgatcatcgagacaacgc
tccgccggcaaaggagggtacctcagtgacggagactcccctgagctgttgccccggcaa
caggctgctgacctcacagcatcccaggaagcttggtgtgacgtcagttcgtttcagctg
tacgtgggctcagatccgccgcgatgcagccagcgggtgacggggttactgacagtgcac
ctgctgggcctggaggagatgaagagcagcagatcagaggacagcaaagaaatcttcttg
gccatccaagtcgatggggtgacaagagccaggaccgccctcttgaccctcagaggccac
acccggcccctgaaccacacctttcacctcgacttggagagggcccggcagcttcgcatc
gtggtgctgacaccagctccgtcagcggtgggcggagccaaaccagaccagagtaattct
gctggaggtccaaacaggaaccgggtgtgctgcctgggtggcgtctccatcccgccgctc
tttaaaggaagtcgcagtcagcagctctgcctgaagctggagcccagaggactgctgtac
gtcaaactgactctgcaggaaaaatgggacacccagcacggcagggatccatcagcgccg
gctaatgtgtttggggttgaactgcaccacctggtggagaaagaaggaagcgcagctcca
gttcccctgctgatccagaagacggtggcagaaatagagagacgaggcctgaaggtggtg
ggtctgtaccggttgtgtggttccgctgccatcaagaaggagctgagagacgggtttgag
aagaacagttcagccgtgtgtctgtccgaggaccggtaccccgacgtcaacgtcatcaca
ggtgttctgaaggactacctccgtgagctgccatcaccgctcatcaccaggactctgtac
caggtggtcctggaagccatgacccttcgaccaccactggagacccccgacccagaagcg
gcccagtgcaccgttagactcctgtcctgtctgccggaaccagagaaggccacgctgtcc
gtgttgctggatcacctcagcctggtcgcatccttcagctccttcaaccggatgacgcac
cagaatctggcggtctgctttgggccggttctcctcaccccaacccaggaggcccgccgg
gcggctggcagggggagccggggcaagaccctcggtccgggggaggagatggccaatgca
gtggacttcaagcggcacatcgaggccttgcactacctgctgcagctctggccagtgccg
atcaaccgagtgccagtagacgaaccctctcctccacgctctccttccattccccgacac
ctccaggtcgaaccacgcccgcagcactgcccaccgtggcttcccggcgccgacggcgtg
gtgtcccgtcgggggcgtggcggaccagcccggttggagagcccgccccccgtcaaccgg
tatgccggggattggaccgtctgcgggccagacctgccggcagaggatgaagccgactac
gacgaggtggcgggaagtgagagcgaaggaggcagcagagaggaagaggaggaggaggag
cagaaggaggcttggccgcccggagccacaggaggaggccacttcgtagacgacttcatg
gactttgatgctccgttcaactgtcgcctcagcctgaaggactttgacaccctgatccac
gacctggaccgggagctggccaagcagatcaacatctgcctgtag
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