Xiphophorus hellerii (green swordtail): 116716778
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Entry
116716778 CDS
T07363
Symbol
cldn12
Name
(RefSeq) claudin-12
KO
K06087
claudin
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03272
Virion - Hepatitis viruses
xhe04382
Cornified envelope formation
xhe04514
Cell adhesion molecule (CAM) interaction
xhe04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
116716778 (cldn12)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116716778 (cldn12)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116716778 (cldn12)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116716778 (cldn12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xhe03037
]
116716778 (cldn12)
04147 Exosome [BR:
xhe04147
]
116716778 (cldn12)
Cilium and associated proteins [BR:
xhe03037
]
Other cilia and associated proteins
Stereociliary proteins
116716778 (cldn12)
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
116716778 (cldn12)
Exosomal proteins of colorectal cancer cells
116716778 (cldn12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Clc-like
Motif
Other DBs
NCBI-GeneID:
116716778
NCBI-ProteinID:
XP_032413508
LinkDB
All DBs
Position
3:16133165..16137765
Genome browser
AA seq
343 aa
AA seq
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MSCRDIHATNAFAFIIAFVSVGGIAVAALIPQWRITRLVTFNRNAKNVTVYDGLWAKCVR
QDGYSGCYYYDSEWYSKVDQLDLRLLQFCLPTGLALASLALLLSMSGMCKTCCCSDKPEP
DIKTTRFLVNSAGCHLVAGTFLFLGGAIAIAPSVWFLFRTKQMNSKYANIFSDGFAVYIS
IGCSGGLMLAALLTFMWYCMCKKLPSPFWLPLNPVTSSPSTQPLTANGFPPSPVYGPQPF
PPQALPPTVIDTQPFVPPQGYIQNVMAPAPAQVYMSQVSPADGYGSEVGGSQAYSYAPSQ
SYAPSQSYAPSQSYASSYAGHRYSTRSRMSAIEIDIPVLTQPE
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgccgggacatccacgctaccaatgccttcgccttcatcatcgcctttgtgtct
gtgggtgggattgccgtggcagcgttgatcccacagtggcgcatcaccagactcgtcacc
tttaatcgcaacgccaagaatgtgacggtgtatgacgggctgtgggctaaatgtgtgaga
caggatggatattctggatgttactactatgactcagagtggtactccaaagttgaccag
ctggatctgcggctcctgcagttctgccttcctacaggcctggcgctggcctctctagcc
ttgcttctgtccatgtctgggatgtgtaaaacctgctgctgctcagacaagcctgagccg
gacattaagaccaccagattccttgtcaacagtgccggctgccatctggtggctgggacc
ttcctgttcctcgggggagcgatcgccatcgcgccgtcagtttggttcctgttccgcact
aaacagatgaacagtaaatatgccaacatcttctccgacgggttcgctgtctatatatcc
ataggctgctctggaggattgatgctagctgcgctacttacattcatgtggtattgcatg
tgtaagaagctgccttcgcccttctggctgcccctgaaccctgtgacttcctctccgtcc
acccagcctctcactgccaacggattccctccttctccggtttatgggccgcagccattc
ccaccacaggcgcttccccccacagtcatcgacacgcagccgtttgtgcctccgcagggc
tacatacaaaatgtgatggcgcccgctcctgctcaggtgtacatgtcccaggtttctcct
gcagatgggtacggatcagaggtgggaggctcccaggcctatagctacgccccgtcacag
agctatgcaccatctcagagttatgccccgtcccagagttacgcctccagctacgccggc
caccgttattccacccgctcgcgtatgtcggccatagagatcgacattcctgttctgacc
cagccagagtga
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