Xiphophorus hellerii (green swordtail): 116716802
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Entry
116716802 CDS
T07363
Name
(RefSeq) B-cell receptor CD22-like isoform X1
KO
K06467
CD22 antigen
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116716802
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116716802
04090 CD molecules [BR:
xhe04090
]
116716802
04091 Lectins [BR:
xhe04091
]
116716802
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
SIGLEC family
116716802
CD molecules [BR:
xhe04090
]
Proteins
116716802
Lectins [BR:
xhe04091
]
I-type lectins (Siglecs)
116716802
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
I-set
ig
Ig_CD22
V-set
Ig_VEGFR-1-like_5th
Ig_6
C2-set_2
Ig_C17orf99
Ig_5
Ig_4
VEGFR1-3_N_Ig-like
PKD_3
DUF7649
C1-set
Motif
Other DBs
NCBI-GeneID:
116716802
NCBI-ProteinID:
XP_032413542
LinkDB
All DBs
Position
3:complement(11032650..11040986)
Genome browser
AA seq
1042 aa
AA seq
DB search
MNTFFVKWVIFVTLINSDFHYCQEIKFHLMSDAQNATEGSCIEIKCTPETVAPISTDAFW
FWMKDAIWIEKDFVGTNIFSSNETEYPVSPEFKNRVKYLSSPTSGKRDSSQVCNILICDL
KKTDSGQYKFRYIWTDSGQYTGWAFKWSTENFNLTVEENPCLITFSQPPAVMTNNTVTLT
CSTSISCNSDPQINTLEQGPSPKWLRFHSIANESETTKSTNLSFTASWEDDGRVFSCQTS
ENKDKYLNRSVTLTVEYSPNNVLANMSNKPVKEGDSVTLTCSSNGRPSVTFSWFKTDNHF
ESANLIKKGKQIQEDQLHFTSINESDSGSYFCQAQNNHGTKQSNKLQIEVLYPPSVHIQV
KYLKTRYYADITEGDKIKLVCYVKRSNPQPTEFTWYKDNYVWSGKEYVFSSIKPEDSGTY
ECIAQNSVGSGRSNPFHLNVQYKPQSKVFTRATDKVKVNSLLKFTCDTKANPEPWFSWYR
YKQSDPTNWTPLNIKKDLTLERVQRTDEGCYICNASNRVGRGESSQPKCIQVLFPPTNMY
LSMVSKVKEGQSVTITCNAESFPLSTFELKKSLPDLSSSECFFSQPANDQNSFTHTFNVT
STHAGLYTCIASNSEGSNSSNQRKLEVEYAPKDVRVEPKPGENVKENESFSLTCTAHSNP
LITQFKWIRRNNSKKDITVSTEKTFTVLSSKPSDSGLYICEVQNVIGSGKSQVKINIKYA
PKWTTIIKGEEQQHLGGRRSVTLSCSSYSYPPATYIWYNKTDNTQISRKQNLTVYSHQAG
EYYCTAKNEIGQIKSDSVSLFDDTFMKIMKVVGWLCLILLIIGLILLYRHRMNKANRQRT
TNRWSCCHFLLIIQGFCSLCKRPGRRNARNENILTNTSRSRDDLLPQQNCRPKAQHQQPR
PDVTSTSHHVNVVYSTVNVPYGKQAPSAQRPGGSQKKCTEDDSLNYASLHFQKKKKEEVE
SVYSQVSNPCKQQAQEKLEDYENINMVSPIKVPYNFDDDSETSDEEEVNYTQVDIIPKPP
GQTDSTDSSTSEDETQYSDVKL
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgaacactttttttgtaaagtgggtgatatttgtgaccctgataaattcagattttcat
tattgccaagaaattaaattccatttgatgagcgatgctcaaaatgctacagaggggtcc
tgcattgaaattaaatgtacgccagagacagttgctcccataagtacagatgctttctgg
ttctggatgaaggatgcaatttggatagagaaggattttgttgggaccaacattttcagc
tcgaatgaaacagaatatcccgtcagcccagagtttaaaaacagagtcaagtatctcagc
tcaccgacaagtggaaagagagattcatcacaagtgtgcaacatattgatctgcgatctg
aagaaaacagacagcggacaatataagttcagatatatttggacagacagcggacaatat
actgggtgggccttcaaatggagtacagagaattttaatctaactgtcgaggaaaaccca
tgccttatcacttttagccaaccaccagctgtgatgacaaataatacagtgacactcaca
tgctctacatccatttcatgtaattctgaccctcaaattaacactctggagcaggggcct
tcaccaaaatggttacgttttcacagcattgcgaatgaaagtgaaacaaccaaaagcacc
aaccttagctttactgccagctgggaggatgatgggagagtgttttcatgccaaacgtca
gaaaacaaggacaaatatttgaaccggagtgtgaccctgactgtagaatattctcctaac
aatgtacttgctaatatgagcaacaaacccgtaaaggaaggagacagtgtgactctcacg
tgctcttctaatggaagacccagtgtcactttctcttggtttaaaactgacaatcatttt
gaatcagctaatctcattaaaaaaggcaaacagattcaagaagatcaacttcattttaca
tcaattaatgaatcagatagtggatcttacttctgccaagctcagaacaaccatgggact
aaacagtctaacaaattacaaattgaagtgctctatccaccttcagttcatatccaagta
aaatatctgaaaacaagatactacgccgacataacagaaggggacaagattaaacttgtt
tgttatgtgaaaagaagcaatccacaaccaactgaatttacttggtataaagataattat
gtttggagtgggaaagaatatgttttctccagtatcaaaccagaagacagcggcacttac
gaatgtatagcccaaaacagtgttggttcaggaagatcaaacccttttcatcttaacgtt
caatacaagccacaaagcaaggtttttaccagagccacagataaagtgaaagtgaacagc
ttacttaaatttacctgtgacaccaaggcaaacccagagccctggttctcctggtaccgt
tataaacagtccgaccccaccaactggacaccactgaatattaaaaaggatctaacttta
gagagagttcaaagaacagacgaaggctgttacatatgcaatgcaagcaacagagttggt
agaggggaatccagtcaacccaagtgcattcaagtactttttcctcccaccaacatgtat
ctgtctatggtttctaaagttaaagaaggccagtctgtaacaatcacctgtaatgctgaa
agcttccctttgtcaacatttgagttgaaaaaatctttacctgacctttcatcctcagag
tgttttttttctcagcctgctaatgatcaaaactctttcacccacacatttaatgtaact
tcaacccacgcagggttgtacacctgcattgcatcaaacagcgaaggaagcaacagcagc
aaccagaggaaactggaggttgaatatgctcccaaagatgtgagagtagaacctaaacct
ggagaaaatgtgaaagaaaatgagtcattctcattaacctgcactgcccattccaatcca
ctgataactcagttcaagtggataagaaggaataatagtaaaaaggacattactgtaagc
acagagaagaccttcactgtactttcttctaagccctctgacagtgggctttacatctgt
gaagtccaaaatgtcattggaagtgggaaatcacaagtgaagattaatataaagtatgca
ccaaaatggacgacaatcattaaaggagaagagcaacagcacctagggggacgacgttct
gtgacacttagctgcagcagttactcctatcctcctgctacttatatctggtacaataag
acagataatacacagatttctcgcaagcagaacttaacggtgtactcccatcaagcaggg
gagtactactgcactgccaaaaatgagatcggtcagatcaagtcggattcagtcagcctg
tttgatgacacatttatgaagattatgaaggttgttggctggctttgcttgatcttgctc
atcataggcctaattttgttgtacaggcacaggatgaataaagcaaatcgacaaaggaca
acaaatagatggtcctgctgtcattttttgctgataattcagggtttctgtagcttgtgc
aaaaggcctggaaggagaaatgcaagaaatgagaatatcttaaccaatacctctagaagc
agagatgacttattgccacagcaaaactgccgtccaaaggctcagcatcagcagcctcgt
ccagacgtcacgtctacttcacatcatgttaacgttgtttattctacagtcaatgtgcca
tatggaaaacaagctccatctgcacaaaggcctggaggaagccagaaaaaatgtacagag
gatgactctctcaattacgcttctctacactttcagaaaaagaagaaagaagaagtagag
tctgtctattcacaagtgtcaaacccatgcaaacagcaagcacaggaaaaactggaagac
tatgagaacatcaacatggtatcaccaatcaaagttccatataattttgacgatgactca
gagaccagtgatgaagaggaggtcaactatactcaggtggacattattccaaaacctccc
ggccagacagactcaacagactccagcacctctgaggatgagactcagtactctgacgtc
aaactgtga
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