Xiphophorus hellerii (green swordtail): 116716811
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Entry
116716811 CDS
T07363
Name
(RefSeq) sialic acid-binding Ig-like lectin 5
KO
K06549
sialic acid binding Ig-like lectin 5
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
xhe04090
]
116716811
04091 Lectins [BR:
xhe04091
]
116716811
CD molecules [BR:
xhe04090
]
Proteins
116716811
Lectins [BR:
xhe04091
]
I-type lectins (Siglecs)
116716811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
V-set
Ig_2
ig
C2-set_2
V-set_CD47
LapA_dom
PRIMA1
Ig_5
Motif
Other DBs
NCBI-GeneID:
116716811
NCBI-ProteinID:
XP_032413567
LinkDB
All DBs
Position
3:complement(11066049..11071932)
Genome browser
AA seq
636 aa
AA seq
DB search
MFTVFWTTLFFFLWVSTTYTVESALGRPSCYNGFCITLNEEMITAKAGLCVVIPCSFTTP
DGFTSKSIVWFKCEPQKRRCSDSDIIFHINRYKVPSEFLGRVLLLDPDVSQGNCSIMIND
LTTSDSGSYQLRVNGFYHGMADGVTFLLRTILSVKDLNQRPSLMIPPLTEGQQATLTCTA
PGLCSPSPPIITWMWRGKGEMEANITGNTTASFKTENLTAVTQRHSSILTFNSSAKHHDT
NLTCKVSFTSDITTEETVTLKVNYKRQPQITGKTTVKEGDDLNLTCNIESFPQSVVVWTK
HSGSGIYFQNNTASATFVILNVTAEDSGRYVCTATHLNETVSVYADVKVTWFSKILKSSG
CVLQSALLTCVCITEGFPLPTITWPLLKDHTEYSVITTVSNHTVNNTVTLSLKSLHYVSV
ECYSSHENEEAKENLTVQEDFTEKEAIQTKTTLEKVFSLEVIVAFLIGVLLSAIICCLAV
KCNRKTLKKSENEDGTLEMISLDDPLIDDGQDVQNDKSLVQEETENVPTAGEKSASEISK
DPKDVQYASIDFSIMKRRSATGAAKERASTLTEYAEIKTGPKEQRKDGSKEGSETLEDEE
EDLITKHDEETEHCVSEEQIEVEAVYSTVKDVLDEI
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtttactgtcttctggacgacattgtttttctttttgtgggtttccaccacatataca
gttgaatcagcccttggaagaccgtcctgttacaatggattctgcatcactctcaatgag
gaaatgataacagccaaagctggactgtgtgttgtgataccatgttccttcaccactcct
gatggatttacatcaaaaagtattgtctggtttaaatgtgaaccacagaaaaggagatgt
agtgactctgacataatatttcacataaatcgttacaaggttccatcagaatttctagga
cgggttttactgttggatcctgatgtgagtcaggggaactgcagcatcatgatcaatgac
ctcacaacatctgattctggatcatatcagctcagagttaatggtttttaccatggaatg
gcagatggagttacgttccttttaagaacaattctctctgtcaaagatctaaaccagagg
ccctcactgatgattcctccactgactgagggacagcaggccactctgacctgcactgct
cctggtctctgctctccgtctcctcctatcatcacttggatgtggagaggaaaaggcgaa
atggaagctaatattacaggaaacacaactgcttctttcaaaactgagaatctgactgct
gtcacacagagacacagttcgattctgacctttaactcttcagctaagcatcatgatact
aatctaacctgtaaggtcagcttcacaagtgacataaccacagaagagactgtgaccctg
aaagtaaactataaaagacaacctcagatcactggaaagactactgtgaaggagggagat
gatctgaacctgacctgcaacattgaaagttttcctcaatcagttgttgtgtggactaaa
cattcaggaagtgggatttactttcaaaataacactgcatcggcaacatttgtcatcttg
aatgtgacagctgaggattctgggcgatatgtgtgcacagcgactcacctaaatgaaaca
gtgtctgtatatgctgatgtaaaagtgacttggttttcaaaaatactgaaaagttctgga
tgtgtgcttcagtcagcactcctgacctgtgtgtgtatcactgaggggtttcctctaccc
actataacatggcctctgctgaaagaccacacagagtactcggtcattacgaccgtgtca
aaccacactgttaacaacactgtcaccttatcccttaaaagtctccattatgtcagtgtt
gaatgttacagcagccatgaaaatgaagaagccaaagaaaacctcacagtccaagaagac
ttcacagaaaaagaagccattcagaccaaaactactttagaaaaggttttcagcctggaa
gtcattgttgcctttctgattggagttctgctttcagctatcatttgttgtttggctgta
aaatgcaacaggaagacactgaagaagtctgagaatgaagatggaactctggaaatgatc
tctctagatgatccactgatcgacgacggtcaggatgttcaaaatgacaaatcccttgtg
caagaggaaactgagaacgtacctacggcaggagagaagtcggcttcagaaattagcaaa
gatccaaaagatgtgcagtatgccagcattgatttctcaatcatgaagagaaggagtgca
acaggggcagcaaaggaacgagcgagcactttgactgagtatgcagagattaaaactgga
ccaaaagagcaaaggaaagacggcagtaaagagggaagtgagacactggaggacgaagag
gaggatttgataacaaaacatgatgaggagacggaacattgtgtctcagaggagcagatt
gaagtggaggcagtttactccaccgtcaaagatgttttagatgagatctaa
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