Xiphophorus hellerii (green swordtail): 116716845
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Entry
116716845 CDS
T07363
Symbol
cthrc1
Name
(RefSeq) collagen triple helix repeat-containing protein 1 isoform X1
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xhe03037
]
116716845 (cthrc1)
Cilium and associated proteins [BR:
xhe03037
]
Other cilia and associated proteins
Stereociliary proteins
116716845 (cthrc1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
116716845
NCBI-ProteinID:
XP_032413662
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Position
3:28392617..28399868
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AA seq
256 aa
AA seq
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MSPLASRLLVLLCLALPLYGVEKVKSRGYRKEPDVDKCTGNDADKPNCTRHSSDEGRPPC
RSSMYGSCLQGPAGTPGRDGNPGANGIPGTPGIPGRDGLKGEKGECVSEIFEEPWRPNYK
QCAWNALNYGIDLGKVADCTFTKLRSDSALRVLFSGSLRLKCKNACCQRWYFTFNGAECT
GPLPVESIIYLDQGSPELNSTINIHRTSSVEGLCEGVKAGLVDVAVWVGTCADYPRGDAS
TGWNSVSRIIIEELPK
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctctggcgagccgcctgctcgtcctcctctgcctggcgttgcctctttacggc
gtggaaaaggtgaaaagcagaggataccgaaaggaacccgacgttgacaagtgcacagga
aacgatgcagacaaacccaactgcactagacactcctcggacgagggaagacctccttgt
cggagcagcatgtatggcagctgcctgcaaggcccagcaggaacccctggaagagacggc
aaccccggagccaacggcattccaggcacgccgggcatcccgggccgtgacgggctcaaa
ggtgaaaaaggggaatgcgtgagcgagatctttgaggaaccctggaggcccaactacaag
cagtgcgcctggaacgcactgaattatgggatcgacctgggtaaagtggcggactgcacg
ttcaccaagctgcgctcggacagcgctctcagagtcctcttcagcggttccctgcgactc
aagtgcaagaacgcctgctgccagcggtggtacttcaccttcaacggggccgagtgcacg
ggacccctgccggtggagtcaatcatctacttggaccaggggagtccggagctcaactcc
actatcaacatccacagaacatcctcagtcgaggggctgtgcgagggcgtcaaggcaggg
ttggtggacgtggcggtgtgggtggggacctgcgccgattatccccggggagacgcttcc
acggggtggaattctgtgtccaggatcatcatagaggagctgcctaaatga
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