Xiphophorus hellerii (green swordtail): 116716849
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Entry
116716849 CDS
T07363
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116716849
04121 Ubiquitin system [BR:
xhe04121
]
116716849
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
116716849
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
116716849
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
hAT-like_RNase-H
HP1454-like_C
Motif
Other DBs
NCBI-GeneID:
116716849
NCBI-ProteinID:
XP_032413667
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Position
3:complement(32808321..32810289)
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AA seq
496 aa
AA seq
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MIVKDTQPFTIVDDVGFRTFVSKLDPNYVLPTRQALKAMVEAKYESAKEHAKAKVEKVAA
VSLTSDMWTSINMDAYLAVTCHFVEENEKLSSVLLGVQAFPQSHTAENIACVKASLMEEW
GISGKVTCMVTDGAPNMVACVRELKLRHHICVAHTLNLVVKRALDQHPVLSGLRAKARKL
VGYFRSSTTAKEKLTQVQLQLGMQATKLMQEVETRWNSTYLMLQRLVELREPVGAALAGL
HTDIPFFTASEFDIVVACLSLLSPFYDATTELSAEEHVSASKVIPLLKMVEKALQEEDTK
SAPAVAVEIGEQLIRQLREKLHMLQSMSILSLATLLDPRFKLIAFFSNTKAAEAVKRLTS
ECATVIRRNTEENTHEIPQASTSQEFTGGSRLWQRLDTSVMEAKRTQNVSADATIEVQRY
LSEANISRLENPLEYWANHRSLYPNLYKLALIYLCTPASSVPCERVFSKAGEVVSKKRNR
LKPKTVEKLLFLNKNA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgaaggatacccagcctttcactattgtggatgacgttggattcaggacattt
gtgtctaagctggatcccaattatgttctccctacaaggcaggctctgaaggccatggtg
gaggccaaatatgagtctgctaaggagcacgctaaggctaaagtagagaaggtggctgct
gttagccttacatcagatatgtggacatccatcaacatggatgcctacctggcagtgaca
tgccactttgtggaggagaacgaaaagctgagctcagtgttgttgggagtgcaggcattc
ccccagtctcacactgctgaaaatattgcttgtgtgaaagcctccctgatggaggaatgg
ggaatctcaggcaaggtgacatgcatggtcaccgatggtgctcctaatatggtggcatgc
gtgagagagctgaagcttcgccatcacatttgtgttgctcacaccctcaatcttgttgtg
aagagggcgcttgaccagcaccctgtgctctctggcctccgggccaaagcaaggaagctg
gttggctactttagaagcagcaccactgctaaggagaagcttacacaagtgcagcttcag
ctgggtatgcaagcaaccaagctgatgcaggaggtggaaacaagatggaacagcacctac
ttgatgctgcaacgtctggtggagttgagggagccagtaggagcggcattggctggatta
cacactgacattccctttttcactgccagtgagtttgacattgttgtagcgtgcctttct
ttactctctcctttctatgatgccaccacggagctctctgcagaagaacacgtgtcggca
tcaaaagttatccccctcctgaagatggtagagaaagcccttcaggaggaagacaccaag
tcggcacctgcagtagcagtggaaataggagagcagctcatcagacagctcagggagaag
ctgcacatgctccagtcaatgagcatcttgtcgctggctacactcctggacccacgattt
aaacttatagcatttttcagcaacacaaaagctgctgaagcagtgaagcgcttgacttca
gagtgtgccaccgtcatccgacggaacacagaagagaacactcacgagattccccaggct
tccacctctcaagaattcactggaggtagcagactttggcaaagattggacactagtgtc
atggaggcaaagaggactcaaaatgtgtcagcagatgccaccatagaggtccagcgctac
ctgtcagaggcaaacataagcaggctggagaaccccctggagtactgggctaatcatcgg
tcactgtaccccaatctgtacaaacttgcacttatttatttatgcaccccggcatcatct
gtgccatgtgagcgtgtcttttcaaaggctggagaagtagtgtcaaaaaagagaaatcgt
ttgaaaccaaaaactgtggagaaattgttgtttcttaataaaaatgcatga
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