Xiphophorus hellerii (green swordtail): 116716954
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Entry
116716954 CDS
T07363
Name
(RefSeq) high affinity nerve growth factor receptor-like
KO
K03176
neurotrophic tyrosine kinase receptor type 1 [EC:
2.7.10.1
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04010
MAPK signaling pathway
xhe04020
Calcium signaling pathway
xhe04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116716954
04020 Calcium signaling pathway
116716954
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
116716954
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xhe01001
]
116716954
Enzymes [BR:
xhe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
116716954
Protein kinases [BR:
xhe01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
116716954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
LRRCT_2
LRR_8
ig
Ig_2
LRR_5
C2-set_2
TrkA_TMD
C2-set_3
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
116716954
NCBI-ProteinID:
XP_032413863
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All DBs
Position
3:2666754..2708441
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AA seq
802 aa
AA seq
DB search
MDVAPRALALLLPLVLVLLSLSPALTLGGCPSACRCSSAMLQCLEPNGISSIPPLALQES
ENVTEIYIENQAGLENITEVNLANYRELKNLTVTSCKLRFISANAFQNNLKLQYVNLASN
FLEHISWRVFHFLPLLNLILRDNPLVCSCDLFWLQQWQNEDRGDIDSQMLFCLSNDEELS
LSSLEIDNCSLPEVTIYASQLKTREGGNLMFECRVTGSPTPKVMWQTKELASNFTVQEKM
TGSTLSLVLHLTNVSFKDNMHNLTCEAENQAGPNEGMVQLDIEFPAKIIFFKDAVKHHHW
CFPFAVDGNPDTYISWFFNGEPYRKSKFIFIHFIADSNDGSVKHGCLTLNKPTHMNNGNY
TLVAVNELGGENATAVGMFMENPFDNGDPEGIMIVSNGDPSPSNKPVVDVTENSESRVFV
VSVAVGLAVFTCIFLLITVLIINKCGHQTKFGIHRSSVLGKEDDLAVSLRFMNFGTSPPS
SDEDSGLSSFVENPQYFCGIIKDKDMCVQHIKRQDIVLKWELGEGAFGKVYLAECANLSP
DSDKMLVAIKTLKDANESTRQDFQREAELLTVLQHQHIVRFYGVCTDGEPLAMVFEYMRH
GDLNRFLRAHGPDARILEESKLPPLGQLTLPQMLQIAAQIASGMVYLASLHFVHRDLATR
NCLVGEGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIMYRKFTTESDIWSFG
VVLWEIFTYGKQPWYQLSNSEAIECITQGRELERPRTCPKEVYLLMHGCWQREPQQRMVI
KDIHSRLLELVKNPPVYLDILG
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggctcccagggccctggcgctcctcttgcctctggtgctcgtcctgctcagc
ctgtcgcctgcgctcaccttgggaggatgcccgtctgcttgccggtgctcttctgccatg
ctgcagtgcctggagcccaatgggataagcagtatcccgccactggcgcttcaagagagt
gagaacgtgacggaaatctacattgaaaaccaagcaggtctggagaacataacagaggtc
aaccttgccaactacagagagctgaaaaatctaaccgtcacatcatgtaaactgaggttc
atttctgcaaatgctttccaaaacaacctgaagctgcagtacgtgaacctggcgtcgaac
tttctggagcacatcagctggagagtgtttcattttctgcctctgctcaacctgatttta
agggacaaccctctcgtctgctcatgtgacctcttctggctgcagcagtggcagaacgag
gatcgtggcgacatcgacagccagatgctgttttgcttgtccaacgatgaggaattatcc
ctcagttctttggagatcgataattgcagtttgcctgaggtgaccatttacgcatcacaa
ttgaagaccagagagggaggaaacctcatgtttgaatgccgggtgacagggagtcccacc
cccaaagtgatgtggcaaacgaaagaacttgcatctaactttactgtccaggagaaaatg
acgggctccacgttaagtctggtgcttcatctcaccaacgtctccttcaaggacaacatg
cacaacctgacgtgtgaggcagagaaccaagctgggcccaacgaggggatggtgcaattg
gacattgagtttccagccaaaatcatcttcttcaaggacgccgtgaaacaccaccactgg
tgcttcccgttcgctgtggacgggaatcctgacacgtacatctcctggttcttcaatgga
gaaccgtacagaaaaagcaagttcatcttcatacacttcatcgcggactcgaacgacggg
tcagtgaagcacggctgcctaaccttaaacaagccgacccacatgaacaacggaaactac
actctggttgcggtgaacgagctcggaggggaaaatgccacggctgtcgggatgtttatg
gaaaatccttttgataatggtgatcctgaggggatcatgatagtctctaatggggatcca
agtccatcaaacaaaccggtcgtggacgttacagagaattcagagagtcgggtgtttgtg
gtctctgttgctgtgggcctcgctgtgttcacctgcatctttctgctcatcacagttttg
atcattaacaagtgtggtcaccaaaccaagtttggtattcaccgctcatcagttctcggt
aaggaggatgacctggccgtctcactccgcttcatgaattttgggaccagcccgccttcc
tccgacgaagactctggtttatcaagttttgtggagaacccgcagtacttctgtggcatc
atcaaggacaaagacatgtgtgtgcagcacattaagcggcaggacattgtgttgaagtgg
gagctaggtgaaggagcgttcggcaaagtctacctggcagagtgtgcgaacctcagcccc
gacagcgacaagatgctggttgccattaagactctgaaggatgccaacgagtcgacgcgg
caggacttccagcgggaggccgagctgctgacggtcctccagcatcaacacatcgtgcgt
ttctacggcgtgtgcacagacggcgagccgctggccatggtgttcgagtacatgagacac
ggagacctcaaccgcttccttcgagctcacggcccagacgctcgtatcctggaggagtcc
aagttgcccccgttgggccagctgactctgccccagatgctgcagatcgccgcccagatc
gcctcaggcatggtttacctggcatcgctgcactttgtccaccgcgacctggccacacgc
aactgtctggtgggagaaggcctggtggtgaaaattggagacttcggtatgtccagagac
atctacagcacagactactaccgggttggtggacgtacgatgcttccgatccgctggatg
ccgccggagagcatcatgtacaggaagtttacaacagagagcgacatctggagcttcgga
gtcgttctttgggaaatcttcacctacggcaaacaaccctggtaccagctgtccaacagt
gaggccattgaatgcatcacgcaggggcgggagctggagcggccccggacctgccccaag
gaggtgtacctgctgatgcacggctgctggcagagggagccccagcagaggatggtcatc
aaggacatccacagccgcctgctggagctggtcaagaacccgcccgtttacctggacatc
ctgggctga
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