Xiphophorus hellerii (green swordtail): 116717023
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Entry
116717023 CDS
T07363
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116717023 (ascc3)
Enzymes [BR:
xhe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
116717023 (ascc3)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
116717023 (ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
116717023
NCBI-ProteinID:
XP_032413978
LinkDB
All DBs
Position
3:complement(32533234..32768404)
Genome browser
AA seq
2200 aa
AA seq
DB search
MSPPRLTGALRSFSNVSKREDPTEQLYDLKAKRVKRQELFAREGLTWQKIVHFCSEHQDK
AKQQAASQELKSLIQAAKQIVGTEHGQEAIECAAVFLFETFQNKDHVGTEETCAIKQMFG
PFPSSAAEASCACVARLVAPLDDSKVEDFIKTQRSRYHHQRGSAFGCNVNFSYDFYTLDP
LEDLQGSDLGDERVDVDFVNFLNNQQSGYKSASEDDVPHSGTTLSSGDGSILRREVEKYL
EGGNMISSNPEELCTSLFEMLTSHRSDDELQNELFELLGPEGLEMISTLLQSRTAIVDSF
LSIPNEKTGYLPDVSRKVSGEMTKPAYGCQVIIQSEKEKQMMKIYRREEKKEKKRAKGSD
DGDFSEAVMTFDPKEMRAQREHVLLNARYEPLLTRERVYERIRYPNVYDSYAEATKAPAF
VGGARLLLPEGIHRENNKIYEEVEIPYNEPMPVGFEERPVYISELDEVGQLVFKGMKRLN
RIQSLVFETAYNTNENLLICAPTGAGKTNIAMLTVLHEIRQHIQPGGIIKKDEFKIVYVA
PMKALAAEMTNYFSKRLEPLGIIVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRKSVG
DVALSQIVRLLILDEVHLLHEDRGPVLESLVARTIRQVESTQSMIRILGLSATLPNYLDV
AAFLHVNPYIGLFFFDSRFRPVPLGQTFVAIKTTNKIQQIHDMEEVCYNKVLQQIKGGHQ
VMVFVHARNATVRTAFGLIEMAKNRGEICFFQPDQGPDYGQCEKQIQHSRNKQMKEMFPE
GFGIHHAGMLRSDRSLMENSFSKGHLKVLVCTATLAWGVNLPAHAVIIKGTQIYDAKRGA
FVDLGILDVMQIFGRAGRPQFDKYGEGTIITTHDKLSHYLTLLTQQNPIESQFLGSLADN
LNAEIALGTVTNVEEAVKWLSYTYLYVRMRANPLVYGINHKAFQMDPALELHRKELVVES
GRKLDKARMIRFDERTCYFASTDLGRTASHFYIRYNTIETFNELFNSQKTEADILSIVSK
AEEFDQLKVRDEELEELDQLLQNHCILSAAGGVENGYGKVNILLQTYIGRGEVDSFSLIS
DLSYVAQNAARIVRALFEIALRKRWPAMTYRLLNLCKVIDRRLWGFSHPLRQFPNLSHVI
LNRLEEKRLTVDKLKEMKKDEIGHMLHHVNIGLTVKQCVHQIPAFTMEASVQPITRTVLR
VRLIITPDFRWNDQVHGSVGEPWWLWVEDPINDHIYHSEYFLLQKKQVVTKESQHIVFTI
PIFEPLPSQYYIKAVSDRWLGAEAVCIINFQNLILPERHPPHTELLDLQPLPVTALGNQE
FESLYKFTHFNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAELAMFRVFSKYPSSKVVY
IAPLKALVRERIEDWKIRIEEKLGKKVVELTGDVTPDMRAIAQADLIVTTPEKWDGVSRS
WQNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTAKGVRVVGLSTALANAR
DLADWLGIQQVGLFNFRPSVRPVPLEVHIHGFPGQHYCPRMASMNKPTFQAIRSHSPAKP
VLIFVSSRRQTRLTALDLIAYLATEDNPKQWLHQDERMIEDVIATVRDSNLKLTLAFGIG
MHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVVVKGTEYYDGKSRRYVD
YPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLSVLSDHLNA
EIAAGTISSKQDAMDYITWTYFFRRLVMNPSYYNLEDIGHESINKYLSNLVERSLLDLEC
SYCIDIKEDDQTVEPLTYGRIASYYYLKHPTIRMFKERLRAELPLHDLLSVLTDAEEYAE
LPVRHNEDQLNSQLAQQLPLQVNPRSFDSAHTKTHLLLQAHFSHTQLLCSDYTTDTKTVL
DNAIRICQAMLDVAANEGWLGTVLSICNLIQMIVQGRWLHDSSLLTLPHVQRHHLYLFRK
WAGIKGKSDAEGFCGPVEGLPELIAACGGKESVLSAIVNQEFQPNQILQAWSFLSHLPVL
EVQMSVKGWWEESQEQMECPLPRRGTNLREESRWLDVHADQEYVLQVSLHRLNLGQHRRK
QESKAQAPRFPKAKDEGWFLIMGEVDRKELLAVKRVGYIRNHTAVSVAFYTPEKTGKCIY
TLYVMSDSYLGLDQQYDIHLNVTPTSIAAQVNTEVVDSLS
NT seq
6603 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctccgcgtcttacaggtgctcttcgttctttctctaatgtcagcaagagggag
gatcccacggagcagctgtatgacctgaaggccaagcgtgtgaagagacaagagctgttt
gccagagaaggcttgacatggcagaagattgtccatttttgttctgagcatcaggataaa
gctaagcagcaagctgccagtcaggaactgaagagcctgattcaggcagccaaacagatt
gttggaactgaacatggtcaagaggccatagaatgtgctgctgtctttctgtttgagacc
tttcaaaacaaagaccatgttggaacagaggagacctgtgccattaagcaaatgtttgga
ccatttccatcgtctgcagctgaagcttcctgtgcttgtgtggctcggctggtggcccca
cttgatgactccaaagtcgaagatttcatcaaaacccagcgttcccgttaccaccaccag
cgaggctctgcctttggatgcaacgttaatttctcttatgacttctacacacttgaccca
ctggaagacctccaaggttctgatcttggtgatgagagagtggatgtagactttgtcaac
tttctcaataatcagcaaagtggatataagtctgccagtgaagatgatgtgccccatagt
ggaacaactttaagctctggggatggatccatccttagaagagaagtggaaaaatacctg
gaaggaggaaatatgatttcatctaacccagaggagctgtgcacctccttgtttgagatg
ctaacctcccacaggagtgatgatgagctgcagaatgagctgtttgaactgctgggacca
gagggcctagagatgatatccaccctcctgcagagcagaacagctattgttgactccttt
ctctccatcccaaatgaaaagacaggatacctaccagatgtcagccgaaaggtcagtggt
gaaatgaccaagcctgcctatggttgccaggtgatcattcagtcagagaaggagaaacaa
atgatgaaaatctaccggcgagaagaaaagaaagagaaaaagagagccaaaggaagtgat
gatggtgacttctcagaggctgtcatgacctttgaccccaaagagatgagagctcagcga
gagcatgtcctgctgaacgcacgttatgaacctcttctaaccagggaaagagtttatgaa
agaatccgttatccaaatgtatatgacagctatgctgaagcaacaaaagcacctgcattt
gttggaggagccaggctgctgttgcccgagggtatccacagagaaaacaacaagatatat
gaagaggtggagatcccatacaatgaacccatgcctgttggttttgaggagagaccagtc
tacatctctgaactggatgaggtcggacagttggtgttcaagggaatgaagcgtctgaac
aggatccagtctctagtgtttgagactgcctacaacaccaatgaaaaccttctgatctgc
gctccgactggcgctggcaagaccaacatcgccatgctgacagtcctgcatgagatccgt
cagcacatacagcctggtggcattatcaaaaaggatgaatttaagatagtatatgtggct
ccaatgaaggccttggcagctgagatgaccaattacttcagtaagcgattggaacctctg
ggcatcattgttaaagaactcactggagacatgcagttaaccaaaggagagatccttcga
acacagatgttggtgacaactccagagaagtgggatgttgtgacaaggaaaagtgttgga
gacgtggctctctctcaaattgtgcgtctcctgatcctcgatgaagttcatcttctacat
gaagatcgtggaccagtactagagagcctggtggcaagaactatcagacaggtggagtct
acccagagtatgatcaggatcctgggactgtctgccaccctgccaaactacctggatgtg
gcagccttcctgcacgtcaacccctatatcggcttgttcttctttgacagccgcttcaga
cctgtgcctcttggacaaacctttgttgccatcaaaaccaccaacaagatccaacagatt
catgacatggaagaagtgtgctacaacaaggttctgcagcagattaaaggtggacatcag
gtcatggtttttgttcatgctcgaaatgccacagtgaggacagcttttgggttgatagag
atggcaaaaaaccgaggagaaatctgtttctttcagccagaccagggccctgactatggc
cagtgtgagaaacagatccaacactccagaaacaagcagatgaaggaaatgttcccagaa
ggctttgggatccaccatgctggcatgctgcggtctgaccgtagcctcatggagaactcg
ttctctaaaggccacctgaaagttttggtctgcactgccactttagcctggggagtgaac
ctgccggcccatgcagttatcattaagggaactcaaatctacgatgcaaagcgtggtgcc
tttgtggacctgggaattttagatgtcatgcagatttttggcagagcgggtcgacctcag
tttgacaagtacggagagggcaccatcatcaccacccatgacaagctgagtcattacctc
accctgctcacccagcaaaatcccatcgagagtcagttcctgggcagcctcgctgacaac
ctgaatgcagagatcgctctgggaactgtgaccaatgtggaggaggctgtgaagtggctc
agttacacatatctgtatgtccgaatgagggccaacccactggtgtatggcatcaaccac
aaagcctttcagatggatccagctttggagctgcacaggaaggagcttgtggtggagtct
ggccggaagttggacaaggccaggatgatccgctttgatgaacgcacctgctactttgcc
tctacagacctgggcaggacagccagccacttctatatcagatataataccattgagaca
ttcaacgaactttttaactcacagaagactgaagcagacatcctcagtattgtgtccaag
gcagaagagtttgatcagttgaaggtccgtgatgaggagctggaggagctggatcagttg
ctgcaaaaccattgcatcctctctgcagcgggcggcgtggagaacggttatggcaaagtt
aacattttgctgcagacttacatcggacggggagaagttgatagcttctcactcatctca
gacctgtcatatgtggcacagaacgctgctcggattgtcagagctttgtttgagattgct
ctgaggaagcgctggcctgccatgacctaccgactgctcaacctctgcaaggtgatcgac
aggcggctgtggggcttttcccaccctcttcgccagttccctaacctgagccatgtcata
ctcaaccgcttagaggagaagaggcttacagtggacaaacttaaggaaatgaagaaggat
gaaattggtcacatgctgcaccatgtcaacattggattaactgtcaagcagtgcgtccac
cagattcctgccttcacaatggaggcgagcgtccagccaataacacgcacagttttacgt
gtgcgactcatcatcactcctgacttccgctggaatgaccaggtccacgggtctgtgggt
gagccatggtggttgtgggtggaagaccccatcaatgatcacatctaccactctgagtac
ttcctcttgcagaagaaacaggtggtaaccaaagagtctcagcacatagtattcaccatt
cccatctttgagccgttaccctcccagtactacattaaggcagtgtctgaccgctggctt
ggagccgaggctgtgtgcatcatcaacttccagaacctcattctacctgagcgacatccc
ccacacactgaacttctggacctgcagccattgcctgtgacagctctggggaaccaagag
tttgagagcttgtacaagttcactcactttaatcccatccagacacagatcttccacaca
ctgtaccacactgacaccaacgtcctgctgggggcaccaacaggctctgggaaaaccatt
gcagccgagcttgccatgttccgggtcttcagcaagtatccctcctctaaggttgtctat
attgcccctttaaaagctttggtgagagagaggattgaggactggaagatcaggattgaa
gaaaaactggggaaaaaagtggtagagctaactggtgacgttactccagatatgagagct
atcgcacaagctgacctcattgtcaccacaccagagaagtgggatggagtgagcagaagt
tggcagaaccggagctatgttcagaaagtggccattctcatcatagatgagatccacctg
ctgggggaggacagaggccctgtgttggaggtaattgtgtccaggactaacttcatctcc
tctcacactgcaaaaggagtgagagtggttggtctgtccacggctctggccaatgctcgg
gaccttgctgactggctgggaattcaacaggtggggttgtttaacttccgtccatctgtg
cgtcctgtcccactggaagttcacattcatggtttcccaggacaacactactgtccccga
atggccagcatgaacaaacccactttccaagcgatacgcagtcattcacctgccaagcca
gtgctgatttttgtgtcatcaagaagacaaacccgcctgactgccctggacctgatcgcc
tatctggccacagaggacaaccccaagcagtggctgcaccaagatgagagaatgatagag
gacgtcattgccacagtgagagattccaacttgaagctgaccttagcctttgggattggc
atgcaccatgcaggtcttcatgaacgggacagaaagactgtggaggagctgtttgtcaac
tgcaagatccaggttctgatcgccaccagtactttggcatggggagtaaactttcctgct
cacctggtggttgtcaagggaacagaatactacgatggaaaatccaggcgctatgtggac
tatcccattacagatgtcctgcagatgatgggacgagctggtcgtccacagtttgatgac
cagggcaaagcagttattctggtccatgacatcaagaaggatttctacaagaagtttctc
tatgaaccgttccctgttgagtccagcctcctcagtgtgctgtcagaccatctgaatgct
gaaattgcagccggaaccatctcgtccaagcaggacgcaatggattacatcacatggaca
tacttcttcagacggctggtgatgaatcccagctactacaacctagaagacatcggccat
gagtccatcaacaaatacctgtccaacttggtggaaagaagcttgctggacctggaatgc
tcttactgcatagacattaaagaggatgatcagacagttgagccactgacatatggtcgc
attgcctcttattactacctgaagcatccaaccatccggatgtttaaggaacgactgaga
gccgagctgcctctgcatgacctactctctgtcctcacagacgcagaggaatacgctgag
ctaccggtgagacacaacgaggaccagctcaacagccagctagctcagcagctccctctg
caggtcaacccccgctcctttgacagtgcacacaccaagactcatcttttgctgcaagcc
cacttcagccacactcaactcctatgtagtgactacacaactgatacaaaaacagttttg
gacaacgccattcgaatctgtcaggcaatgctagatgtagctgccaatgaaggctggctt
ggtacagtgctcagtatctgcaacctgatccagatgatcgtccagggccgctggctgcac
gactcttcattactgactcttccacatgtccaacgacaccacctctacctgttcaggaaa
tgggcaggtataaaaggaaagagtgatgctgaaggcttctgtgggcctgttgagggactc
ccagaacttattgctgcctgtggtggaaaagaaagtgttttatctgctattgttaaccag
gagtttcagccaaatcaaatactgcaggcatggtccttcctgagccacctcccagtgctg
gaggtccagatgagtgtgaagggatggtgggaggagagccaggagcagatggagtgccct
ctccctagaaggggcactaacctgagagaggagagcagatggctggatgtccatgctgac
caggagtacgttctacaggtgtcactgcatcggctcaatctgggtcagcacaggaggaag
caggaaagtaaggcccaggctcccaggttcccaaaagcaaaggacgaaggatggttcctc
atcatgggggaagtagatcgcaaagagctgctggctgtcaaacgggtcggatacatccgg
aaccataccgctgtgtctgtggccttctacaccccagagaagacaggaaagtgcatctac
acgctgtatgtgatgagtgacagctacctgggcctggaccagcagtatgacatccacctg
aatgtaacccccaccagcatcgcagcgcaggtcaacacagaagtagtggattccctcagt
taa
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integrated database retrieval system
