Xiphophorus hellerii (green swordtail): 116717063
Help
Entry
116717063 CDS
T07363
Name
(RefSeq) nuclear receptor ROR-alpha B-like isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116717063
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xhe03310
]
116717063
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116717063
Nuclear receptors [BR:
xhe03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
116717063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF3135
Motif
Other DBs
NCBI-GeneID:
116717063
NCBI-ProteinID:
XP_032414025
LinkDB
All DBs
Position
3:complement(16022015..16048786)
Genome browser
AA seq
525 aa
AA seq
DB search
MPAPARALEQPTEVSERARRPIQRCDRSGMEYEESDFLPADTPRKKGGAVSKKTHLTQIE
VIPCKICGDKSSGVHYGVITCEGCKGFFRRSQLPTVSYSCSRQSNCQIDRASRNRCQHCR
LQKCLAQGMSRDAVKFGRMSKRQRDSLIAEVERHRQQQQQQQLQDDTQVELSYPPKNRQD
HSPQLLQPIATPYPYVGDAYGAEVHPYLVYSPSDSQGYRGSGVSPTSRFQGRGDSGGHHD
IRGFDSRQQHQDLMTLHSYSPLDDLYNHYPHSLRNIDELCASVVRSHRETSQYRLEELQA
LRWKVFSREEIQVYQSKTVDEMWQHCAVRLTDAVQYVVEFAKHIPGFRMLSQNDQIALLK
TGSMEVVLVRMCRFFNTENNTVFFDGKFAGTEVFKSLACGDLIAAVFDFAHGMCALKLTE
QQLALFSALVLINADRPSLEDRVRVQRVHRSVEVGLTHILHRDNHDSLLHKLYQRMAVLR
SLCSLHMEKLRWFSQRYPLTAHSLFPPLYKELFASEAELLPGATH
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgccggcccgggcgctagagcagccaacagaggtgagtgaaagagcgcgtagg
cccatccagcgctgtgacaggagcggcatggaatatgaggagtcagactttctacctgca
gacacccccaggaaaaaaggaggcgccgtgtccaagaagactcatttgacccagattgaa
gttatcccatgcaagatttgtggcgataagtcttctggagttcattatggagtcatcaca
tgtgaaggctgcaagggctttttccggcgcagccagcttcccaccgtatcctactcctgc
tccaggcagagtaactgtcagatcgaccgggccagccggaaccgctgccagcactgccgc
ttgcagaagtgcttggctcagggcatgagcagagatgctgtgaagtttggccgcatgtcc
aaacgtcagagggactctcttattgctgaagtggagcgacacaggcagcagcagcaacag
cagcagcttcaagacgacacgcaggtggagctgtcctacccacccaaaaaccgccaggac
cactccccacagctccttcagcccatcgccacaccgtacccctacgtcggtgacgcctac
ggcgcagaggtccacccctatctggtttactccccgagcgactcgcaggggtaccggggc
tccggtgtctcccctacatccagattccaggggcggggggacagcggtggacaccatgat
atcagaggatttgactccagacagcaacatcaggatctcatgactcttcattcctacagt
cctctcgatgacctctacaaccactatcctcactctctgcgaaacatagatgagctgtgt
gccagcgttgtgcgttcccacagagaaaccagccagtacagactggaggagctgcaggct
ctcagatggaaagtgttcagcagagaggagatccaagtctaccagagcaagacagtggat
gagatgtggcagcactgtgccgtccgactgactgatgctgttcagtatgtggtggagttt
gcaaaacacatcccaggtttccggatgctcagccagaacgaccagatcgcactactcaaa
actggctccatggaggtggttctggtccgaatgtgccgcttcttcaacacagaaaacaac
actgttttctttgatggaaaatttgctggaactgaagtcttcaagtctctggcgtgcggt
gatttaatcgcagcggtgttcgacttcgctcatggtatgtgtgctctgaaactcacagag
cagcagctcgccctcttcagtgctctggtcctaattaacgctgaccgtccctctctagag
gacagagtgagagtccaacgagtacacagaagtgtggaggtgggactcactcacattctt
caccgagacaaccacgatagtctgttgcataagctctaccagaggatggcagtgttgcgt
tcgctgtgcagcctgcacatggagaagctgcgctggttcagccaacgatacccgctcact
gctcactctctgttccccccgctctacaaggagctgtttgcgtccgaggccgagctgctg
ccgggggccactcactga
DBGET
integrated database retrieval system
