Xiphophorus hellerii (green swordtail): 116717067
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Entry
116717067 CDS
T07363
Symbol
atg5
Name
(RefSeq) autophagy protein 5
KO
K08339
autophagy-related protein 5
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04136
Autophagy - other
xhe04140
Autophagy - animal
xhe04216
Ferroptosis
xhe04621
NOD-like receptor signaling pathway
xhe04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116717067 (atg5)
04136 Autophagy - other
116717067 (atg5)
09143 Cell growth and death
04216 Ferroptosis
116717067 (atg5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
116717067 (atg5)
04622 RIG-I-like receptor signaling pathway
116717067 (atg5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116717067 (atg5)
03029 Mitochondrial biogenesis [BR:
xhe03029
]
116717067 (atg5)
Membrane trafficking [BR:
xhe04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
116717067 (atg5)
Mitochondrial biogenesis [BR:
xhe03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
116717067 (atg5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_UblB
ATG5_HBR
DUF8018
Motif
Other DBs
NCBI-GeneID:
116717067
NCBI-ProteinID:
XP_032414031
LinkDB
All DBs
Position
3:4359554..4393893
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AA seq
275 aa
AA seq
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MADDKDVLRDVWFGRIPTCFTLNPDEVTEREAEAYYLLLPRVSYLPVVTDKVKKHFLKVM
RAEDVEEMWFEYEGTPLKWHYPIGVLFDLHASNTVLPWNITVHFKNFPDQDLLHCLSNSI
VEAHFMSSIKEADALKHKSQVVNDMQKKDHKQLWMGLQNDKFDQFWAMNRKLMEYPTEDG
GFRYIPFRIYQTLSDRPFIQKLFRPVSPDCNAHTLGDLLKEMYPDALTNDGEQKRYQVLI
HGIEPLLETPLQWLSEHLSHPDNFLHICVVPVPTD
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgacaaggacgtattgagagatgtttggttcggccggatacccacatgcttc
actctgaacccggatgaagtgactgagagagaggcagaagcatactatctgctgctaccc
agggtgagctacctgcctgttgtcacagacaaagtgaagaaacactttctcaaagtgatg
agggcagaggatgtggaggagatgtggttcgaatatgaaggaacgccgctcaaatggcac
tatcctattggagttctgtttgaccttcatgcctctaatacagtcttaccctggaacatc
actgtgcactttaagaattttccagaccaggatctgctgcactgcctgtcaaattccata
gttgaggctcacttcatgtccagcatcaaggaggcggacgccctcaagcacaagagccaa
gtagtcaatgacatgcagaagaaagaccacaaacagctgtggatggggctgcagaacgat
aagtttgaccagttttgggcgatgaacaggaagctgatggaatatcccacagaagatgga
ggctttaggtacatccccttcaggatataccagacgctgagcgacaggccattcatccag
aaactgtttcgccctgtttcgcccgactgcaatgcacacacacttggcgacctgctgaag
gagatgtatccagatgctttgacaaatgatggtgagcagaagcgctatcaagtcctgatc
cacgggatcgagccgctactggaaactcctctgcagtggctcagcgaacacctgagccat
cctgacaacttcctgcacatctgtgtcgtccctgtgcccactgattga
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