KEGG   Xiphophorus hellerii (green swordtail): 116717067
Entry
116717067         CDS       T07363                                 
Symbol
atg5
Name
(RefSeq) autophagy protein 5
  KO
K08339  autophagy-related protein 5
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe04136  Autophagy - other
xhe04140  Autophagy - animal
xhe04216  Ferroptosis
xhe04621  NOD-like receptor signaling pathway
xhe04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    116717067 (atg5)
   04136 Autophagy - other
    116717067 (atg5)
  09143 Cell growth and death
   04216 Ferroptosis
    116717067 (atg5)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    116717067 (atg5)
   04622 RIG-I-like receptor signaling pathway
    116717067 (atg5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xhe04131]
    116717067 (atg5)
   03029 Mitochondrial biogenesis [BR:xhe03029]
    116717067 (atg5)
Membrane trafficking [BR:xhe04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    116717067 (atg5)
Mitochondrial biogenesis [BR:xhe03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    116717067 (atg5)
SSDB
Motif
Pfam: ATG5_UblA ATG5_UblB ATG5_HBR DUF8018
Other DBs
NCBI-GeneID: 116717067
NCBI-ProteinID: XP_032414031
LinkDB
Position
3:4359554..4393893
AA seq 275 aa
MADDKDVLRDVWFGRIPTCFTLNPDEVTEREAEAYYLLLPRVSYLPVVTDKVKKHFLKVM
RAEDVEEMWFEYEGTPLKWHYPIGVLFDLHASNTVLPWNITVHFKNFPDQDLLHCLSNSI
VEAHFMSSIKEADALKHKSQVVNDMQKKDHKQLWMGLQNDKFDQFWAMNRKLMEYPTEDG
GFRYIPFRIYQTLSDRPFIQKLFRPVSPDCNAHTLGDLLKEMYPDALTNDGEQKRYQVLI
HGIEPLLETPLQWLSEHLSHPDNFLHICVVPVPTD
NT seq 828 nt   +upstreamnt  +downstreamnt
atggcagatgacaaggacgtattgagagatgtttggttcggccggatacccacatgcttc
actctgaacccggatgaagtgactgagagagaggcagaagcatactatctgctgctaccc
agggtgagctacctgcctgttgtcacagacaaagtgaagaaacactttctcaaagtgatg
agggcagaggatgtggaggagatgtggttcgaatatgaaggaacgccgctcaaatggcac
tatcctattggagttctgtttgaccttcatgcctctaatacagtcttaccctggaacatc
actgtgcactttaagaattttccagaccaggatctgctgcactgcctgtcaaattccata
gttgaggctcacttcatgtccagcatcaaggaggcggacgccctcaagcacaagagccaa
gtagtcaatgacatgcagaagaaagaccacaaacagctgtggatggggctgcagaacgat
aagtttgaccagttttgggcgatgaacaggaagctgatggaatatcccacagaagatgga
ggctttaggtacatccccttcaggatataccagacgctgagcgacaggccattcatccag
aaactgtttcgccctgtttcgcccgactgcaatgcacacacacttggcgacctgctgaag
gagatgtatccagatgctttgacaaatgatggtgagcagaagcgctatcaagtcctgatc
cacgggatcgagccgctactggaaactcctctgcagtggctcagcgaacacctgagccat
cctgacaacttcctgcacatctgtgtcgtccctgtgcccactgattga

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