Xiphophorus hellerii (green swordtail): 116717128
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Entry
116717128 CDS
T07363
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like isoform X1
KO
K09097
aryl hydrocarbon receptor nuclear translocator
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116717128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116717128
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
116717128
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_3
PAS_11
HLH
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_NCOA
PAS_2
Motif
Other DBs
NCBI-GeneID:
116717128
NCBI-ProteinID:
XP_032414147
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All DBs
Position
3:complement(14779537..14796958)
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AA seq
773 aa
AA seq
DB search
MLFNADMSSSNPDLADHSLGMGASGTQNGGAGGPKGTNKRRAAQDFDDDDGSKMIRFDDE
TGGSNNEKERFARENHSEIERRRRNKMSAYIGELSDMVPSCSALARKPDKLTILRMAVSH
MKSLRGNANTNADGSYKPSFLSDQELKHLILEAADGFLFVVSCETGRVVYVSDSVTPVLN
QSQSEWLGSSLYDQLHPDDTEKLREQLSTSENNNTGRMLDLKTGTVKKESQQSSARMTMG
ARRSFICRMRCGTCPVEPMSMNRLSFLRSRNRNGLGTPKEGEPQYVVVHCTGYVKSWPPA
GVSLTDDEADNNQGSRYCLVAIGRLQVTCCPGDTDLNSISVPVEFISRHNCQGMFTFVDH
RCLTSIGYQPQELLGKNILDFSHPEDQGLLRDSFDQVVKLKGQVLSVMFRFRAKTRDWML
MRTSSFTFQNPFSEEIEYIICTNVNVKNSTQDPLTLISSPGAPMPLAQSSPNGHPVVLSP
GPMATRQLQQQQQQADLEGGATRDGMYEAGPINIQQQMPVQPVVAVGPDHGKTIEKQEIY
PPIFPGSDQTKGMPTNSTPSTQIYTNNFSAGRSNDSYRPVAMPPQMTQPAHSAPQMLPHM
SRQNGAPQSVTPSSTNSPLHGPSGGWPAPGPAARPQFSNQQVAPQAAKTMSQQFPPIGGF
GGGSSNTFGQMPTGAAPTPTNGTNYPQMNPRTSLNTNGYDTSQSGGQFPPRVTEGVWPQW
PGQQQHPQNNREQHPHAQGNQQDIFPDVLSMLDQPAAFNSDDFEIAIYPPYNE
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcaacgcggatatgtcctcttcaaatccagacctagcagaccatagtctgggt
atgggagcaagtgggacccagaacggcggtgctggtggaccgaaggggaccaacaaaaga
cgggcagcgcaggactttgatgacgatgacggaagcaagatgataagatttgatgatgaa
acaggaggctccaacaatgaaaaagagcgctttgccagggagaatcacagtgagattgag
aggcggaggcggaacaagatgtctgcctacatcggagaactgtcggacatggttccctcg
tgcagcgcgttggcacggaaaccagacaagctgaccatcctgcgaatggcagtctctcac
atgaagtctctcagaggaaacgccaatactaatgccgacgggtcatacaaaccttctttt
ctcagcgatcaggaacttaagcacctcattttggaagcagcggacggcttcctgttcgtg
gtatcatgcgagacgggccgtgttgtttacgtctcggactcggtcacacctgtacttaac
cagtcgcagtctgaatggctgggatcttctctttatgatcagctccacccagacgacaca
gaaaagctcagggagcagctctccacttcggagaacaacaacacggggaggatgttggac
ctgaagacaggaactgtgaaaaaggagagtcagcagtcatcagctagaatgacaatgggg
gcgcgccgatcattcatctgcagaatgaggtgtggaacatgcccagtggaaccaatgtct
atgaacaggctcagctttctcaggagtaggaacaggaatggtttaggaacacccaaggaa
ggggaaccccagtacgttgtggtccactgtacaggatacgttaaatcctggccccccgcg
ggtgtatcattaacagatgatgaagcagacaacaatcaggggagtcgctactgtctagtt
gccattgggagattacaggtcacctgttgccctggtgacacagacctaaacagcatcagc
gttcctgtagagttcatctcccgccacaactgccagggcatgttcaccttcgtagatcat
cgctgcttgacctcgatcggctaccagccccaggaattactggggaagaatattctagat
ttttcacaccctgaagaccagggtttgctgagagacagttttgaccaggtggttaagctg
aaaggccaggttctgtcggtcatgtttcggttccgggccaaaacgagagactggatgctg
atgagaacgagctccttcaccttccagaaccccttttcagaggagatcgagtacatcatc
tgtaccaatgtcaatgtcaaaaactcaacccaggaccctctcactctcatctcctccccc
ggggctccaatgcccctggctcagagcagcccaaacggccatcctgttgtgctcagccca
ggcccgatggccaccagacagctacaacagcagcagcagcaggccgatctggagggaggg
gcaacaagagatgggatgtatgaggcgggaccaatcaatatccagcaacagatgccagtg
cagccagtggtagcggtggggccggaccacggcaaaaccatagagaagcaggagatctat
ccgcccatcttcccagggtcagatcagaccaagggcatgccgactaactcgacgccttcc
actcagatttacaccaacaacttttctgctggtcgctccaatgactcatacagaccagtc
gctatgccgccacagatgacacagccggcgcactcggcaccgcagatgctgcctcacatg
tctcgccaaaatggtgccccgcagtctgttaccccatcaagcactaacagccccctccat
ggaccgtcaggaggatggcctgcacccggacctgcagccaggccgcagttcagtaaccag
caggttgctccgcaggcagcaaagacgatgtctcagcagtttcctccaatcggaggattc
ggaggcggctcttctaacaccttcggccagatgcccaccggtgccgctcccacccccacc
aacggcacaaactaccctcagatgaatccccgcaccagcctcaacaccaacggctacgac
acttcccagtctggaggccagtttccacctcgagtgacggagggggtgtggcctcagtgg
ccgggccagcagcagcatcctcagaacaacagagagcagcatcctcacgctcagggaaac
cagcaggacatatttcctgatgtgttgtctatgctagaccagcctgccgcctttaacagt
gacgactttgagatcgccatctacccgccgtacaacgagtga
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