Xiphophorus hellerii (green swordtail): 116717132
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Entry
116717132 CDS
T07363
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xhe03009
]
116717132 (nop2)
Enzymes [BR:
xhe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
116717132 (nop2)
Ribosome biogenesis [BR:
xhe03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
116717132 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
Methyltransf_31
PCMT
DUF383
Motif
Other DBs
NCBI-GeneID:
116717132
NCBI-ProteinID:
XP_032414155
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Position
3:complement(13311288..13317798)
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AA seq
753 aa
AA seq
DB search
MGRKLDPTNKVKRGPGKKAKKQQGAEVELANFIDTEEDAGPKRLSSRARKRAAKRVENLK
KPENVAEKQPKKGYSDDNSKWLKPTKRKRKMDEPESEDDSEEMWEDEEEEEQVLLPKKGG
KEQEKKSADLELKNLEDDDDEEEMVDDYGAEDDGSGQEEEEDEEENSDGDDLLPIERAAK
KEKKLKESMGLSSDDDNEEDDDDSDEKHKSDSDMDEEETIQTNADDFDTFRLPSAEESEK
EGALSLDLKGVHQRIKDNIDVLCNFSAKREEGKARVDYLSLLRKDLCTYYSYNEFLVEKL
MDLFPLSELVDFLEANEIQRPVTIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVI
YDSSVPIGATPEYLAGHYMLQGASSFLPVMALSPQEGELVLDMSSAPGGKTSYMAQLMRN
TGVIVANDANAERLKSVVGNLHRLGVTNSVVSNYDGRQFPKVMGGFDRVLLDAPCSGTGV
IAKDPAVKTSKDEPDILRSAHLQKELLLSAIDSVNATSSTGGYLVYCTCSIMVEENEWVV
DYALKKRNVKLVPTGLDFGKEGFTSFKKFRFHPSLQLTRRFYPHSHNMDGFFVAKFKKFS
NVTPSASVGKEDETTEASEATEATDSPKDKPSKSKAANETALAKTDALKQNAKANGAAAK
KPANIKIKGQQGSQTGPKKAKIAKMDGETVKGAQAKNPAKKTPVQTTVPKTVKKDGSRFE
KKQPKKGKSPLKMKNKMGKNKFKKMKHKFQKNK
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggaagcttgatcccaccaacaaggtgaagagggggccgggtaagaaagccaaa
aagcagcagggagcagaggttgagttggccaacttcatagatacagaagaagatgcagga
ccaaaacgtttgtcaagtagagccagaaaaagagctgctaagagagttgagaacctgaaa
aagccagaaaatgttgctgagaaacaaccaaaaaaaggatacagtgatgacaacagtaaa
tggttgaaacctacaaagaggaagcgcaaaatggatgagcctgaaagtgaggatgacagc
gaggagatgtgggaagatgaggaagaggaagagcaggtgcttctgccgaagaagggagga
aaagaacaagaaaaaaaaagtgcagatttggaattaaaaaacctggaagatgatgatgat
gaagaagaaatggttgacgactatggtgcagaagatgatggcagtggacaggaagaggag
gaagacgaagaggagaacagtgatggagatgatcttcttccaatcgaacgtgctgccaaa
aaagagaaaaaactgaaggaatccatgggtctaagcagtgacgatgataatgaagaggat
gatgacgatagtgatgaaaagcataaatcagattctgacatggatgaggaggaaacaatc
caaactaacgcggatgattttgataccttccgacttccctcagctgaggagagtgagaag
gagggtgccctgtctctggacctgaagggagtccatcagagaataaaggacaacattgat
gtcctctgtaatttctcagcaaaaagggaagaggggaaagccagagtggattacctctct
cttctgaggaaagacctttgtacttattatagctacaacgaattcctcgttgagaaatta
atggacctcttccctctctcagagcttgttgacttcctggaagccaatgaaattcagaga
ccagtcacaattcgaaccaacacgctgaaaacaaggaggcgggaccttgcacaggctctg
atcaacagaggagttaacctggacccactggggaaatggtccaaagtgggtttggtaatc
tatgactcctcagtacctatcggtgcgaccccggagtatctggccggtcattacatgctg
cagggagcctccagctttcttcctgttatggcactctctccacaggaaggggagctggtg
ctggacatgagctcggcccctggaggaaagacctcctatatggctcagctgatgagaaac
acaggagtgatcgtagctaatgatgctaatgctgaaagactgaagagcgtggtgggaaac
cttcaccgcctcggggtcactaactccgtggtcagcaattacgatggcaggcagttccca
aaggtaatgggagggtttgacagagtgctgcttgatgcaccatgctctggcacaggagtt
attgcaaaagatccagctgtaaagaccagtaaggatgagccggatattctgcgctctgct
catttgcaaaaagaactgcttctatcagctatcgactccgtgaatgcaacgtcttctact
ggaggatacctggtctactgcacatgctcaataatggtggaggagaatgagtgggtggtg
gactacgctttgaagaaaaggaatgttaaactagtcccaaccggacttgattttgggaag
gaaggcttcaccagtttcaagaaatttagattccatccttcccttcaactcacccgccgt
ttttacccacattcccacaacatggatggattttttgtggccaaatttaagaagttctct
aatgtaaccccatcagcttcagttgggaaagaagatgagacaacagaagcttctgaggca
acagaagctacagattctccgaaagataaaccgtccaaaagcaaagcagctaatgaaact
gcgctagcaaagacggatgccctaaagcaaaatgccaaagctaatggagcagcagctaaa
aaaccagcaaacatcaagataaaaggacaacagggctctcagactggaccaaagaaggca
aagattgccaaaatggatggagagactgtgaaaggagcccaggcaaagaaccctgcaaag
aagactcctgtccagacaaccgtaccaaagactgtcaaaaaagatggaagtagatttgag
aaaaagcaacccaaaaaggggaaatcacccttgaagatgaagaacaagatgggaaagaat
aaattcaaaaagatgaagcacaagtttcaaaaaaacaaataa
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