Xiphophorus hellerii (green swordtail): 116717139
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Entry
116717139 CDS
T07363
Symbol
clstn3
Name
(RefSeq) calsyntenin-3
KO
K22661
calsyntenin 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116717139 (clstn3)
Cell adhesion molecules [BR:
xhe04515
]
Cadherins
Cadherin related
116717139 (clstn3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
DUF5570
Motif
Other DBs
NCBI-GeneID:
116717139
NCBI-ProteinID:
XP_032414165
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Position
3:complement(12891503..12928299)
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AA seq
957 aa
AA seq
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MDRMNFLSFLLLCLTSVANCNKANKHKPWIETEYQGIVMENDNTVLLNPPLFALDKDAPL
HYAGEICGFRVHNGPSGSGSVQFEAVVLDRSTGEGLVRSKEPLDCESQREHSFTIQAYDC
GEGPDGVNSKKSHKATVHVRVNDVNEFSPVFVERRYEASVPEGRLFDRIVRVEALDADCS
PQYSQICFYDIITPNVPFAIDNDGNIKNTEPLDSKRQRVHTFWVTAFDCGKNRAQADAQV
VVTVKPSCKPGWIGWTKRVEYTPGSGSIPLFPSLHLETCEETVWNIQATVELQTGHIGKG
CDRDSYSDRSVRRLCGAVRGEVDLLPPPSPAANWTSALPTLPSSDSSLVFSFNGSNHVAV
VPDSVVSALSGDHFTLQLWMRRGGANIQPSATQSRGNRKEEETIVCSTVKNDDSYSHYSL
SVHGCRLSLFYWPDVSAARPVKFLWKLEQVCDSEWHHLSLSVQFPSVTLYVDGVTFDPAL
IHDNGAIPNPAPRQRMLIGACWEPEEKQKEILNNTIPEGKDSVKFVGGYHGLLSGVTVRP
GSVEPHSVVECLYACREGLDFGDLETLGSGMKVHVNPSQSVLVLEGDDIESFNRAVQQVT
YRNSLRFATPGVRPLKLTTSLRCFNEESCLSLKQLEGYLVVLQPDAPQISLSGVGPHLAR
PAPEFEGPRGVPLFPELRIVCSLSHAVNTAAQGMEGGALMSDAVAHTLDGCEVQPLGEEL
NPEREELLVDMDVVRERGLDIINTTAYIAITGAESISVYEDVLRSVRYRLARGSGRFERR
FRLSCSEMNGRYTSNELTLEVNFLHSLESLYHPSHLLASQQQFLHPSHHSGELSGHTLPN
PHRNSVVPGAATVIIMVCVGFLVVMVILGVFRIRSIHRRGEGSRGGAKEGSNQWDDSALT
IIVNPMESYESRMGISADTEGDGEEEEEEAAESPDDASDDQRIIIKKEGRDGNARRY
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggacagaatgaattttctctccttcctcctcctttgcttgacttcggttgccaattgc
aacaaagccaataagcacaagccatggatcgagacagagtaccaggggattgtcatggag
aacgacaacaccgtgctgctcaatccccctctcttcgccctggacaaagacgctccgctt
cactacgctggtgaaatctgtggcttccgggttcacaatggtccctcgggctccggttcc
gtccagtttgaagctgtggttctggaccgctccaccggcgagggtctggtccggtccaaa
gagccgctggactgtgagagccagcgggagcacagcttcaccatccaggcctacgactgc
ggagagggacccgatggcgtcaacagcaagaaatcccacaaggccacggttcatgttcgt
gtgaacgatgtcaacgagttttccccagtgtttgtggagcgtcgctacgaggcttcggtc
ccggagggccgtctgtttgacaggatcgtgcgggtcgaggctctggatgccgactgctcc
ccgcagtacagccagatctgcttctatgacatcatcactcccaacgtgcccttcgccatc
gacaacgacggtaacattaagaacacggagcctttggattcgaagcggcagcgtgttcac
accttctgggtgaccgccttcgactgtgggaagaatcgtgctcaggctgatgcccaggtt
gtcgtcacagtcaagccgtcctgcaaacccggctggatcggatggacgaaacgtgtggag
tacacacctgggtcaggcagcattcccctgttccccagcctgcatctggagacctgtgaa
gaaacggtgtggaacatccaggccaccgtagagcttcaaaccggccatattgggaagggc
tgtgacagagacagctactctgaccgttctgttcggcgactgtgtggtgccgtcaggggc
gaagtcgatcttctcccacctccatctccagcagccaactggacctcggctctccccact
cttccttcttccgattcttctctggtcttctccttcaacgggtcgaatcatgtggcggtg
gttcccgactcggttgtgtccgctctgtcgggcgaccacttcaccctgcagctgtggatg
cgtcggggcggcgccaacatccagccttcagccactcagtctagaggaaatcgcaaagag
gaggagactattgtgtgcagcaccgtaaagaacgatgactcctactcccattattcgctc
tccgtccacggctgccgcctctccctcttctactggcccgatgtctcggccgcacggccc
gtcaagttcctctggaagctggagcaggtgtgtgacagcgaatggcatcatctgtccctc
agtgtccagttcccatcagtgacgctgtatgtggacggcgtcacctttgaccctgccctc
atccatgacaacggcgccatcccgaatcctgcgccccgtcagaggatgctcattggtgcc
tgctgggaacccgaagagaaacagaaggagatactaaacaacacaatcccagaggggaaa
gactcagtgaagtttgtgggtggttaccacggcctgctgtcaggggtgacggtgcgtcct
ggcagcgtggagccgcacagcgtggtggagtgcttgtacgcctgcagggaggggctggac
ttcggagacctggagactctgggttctgggatgaaggtccatgtgaaccccagtcaatcg
gtcctggtgctggagggagacgacatcgagagcttcaaccgagccgttcagcaggtcacc
tacagaaactcgcttcgcttcgccacccctggagtccgacctctcaagctcaccacttcc
ctcaggtgtttcaatgaggaaagctgcctgtcactgaaacagctggagggatacctggtg
gtactccagcctgatgcccctcagatctctctgtccggggttggcccacatctggcccgt
ccggcgcctgagtttgaaggaccccgcggcgtccccctcttcccagagctgcggatcgtc
tgctcactgtcacatgctgtcaacacagctgcacagggcatggagggcggagctctgatg
tcggacgccgtggctcacactttggacggatgtgaggtgcagccgctgggagaggagctg
aatccagagcgggaggagcttctggtagacatggacgttgtgcgagagcgaggactggat
atcatcaataccaccgcttacatcgcaattacaggtgctgaatccatctctgtgtacgag
gacgtcctccgctcagtccggtaccgcctggccagaggctctggccgctttgagaggcgg
ttccgcctgtcgtgctccgagatgaatggcagatacacaagcaatgagttgactctggag
gtgaacttcctccactctttggaaagcctataccacccttcccacctgctggcctcacag
cagcagttcctccatccatctcatcattccggagagctgagtgggcacaccttgccgaac
ccacatcgcaactcagtggttccaggagcagccaccgtcatcattatggtctgtgtgggc
ttcctggttgtcatggtgatcctcggtgtcttccgaattcgctcgatccatcgtcgaggt
gaaggctccaggggcggggctaaagagggcagcaaccaatgggacgactcggcgctcacc
atcatcgtcaacccaatggagtcctacgaatcccgtatgggcatttctgccgacacggag
ggcgatggagaggaggaggaagaagaggcagcggagtcacctgacgacgcaagcgacgac
cagcggatcatcatcaagaaggagggcagagacggaaacgcccgccgctactga
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