Xiphophorus hellerii (green swordtail): 116717146
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Entry
116717146 CDS
T07363
Symbol
grik5
Name
(RefSeq) glutamate receptor ionotropic, kainate 5 isoform X1
KO
K05205
glutamate receptor, ionotropic kainate 5
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04080
Neuroactive ligand-receptor interaction
xhe04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116717146 (grik5)
04082 Neuroactive ligand signaling
116717146 (grik5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116717146 (grik5)
Ion channels [BR:
xhe04040
]
Ligand-gated channels
Glutamate (ionotropic)
116717146 (grik5)
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Ortholog
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
116717146
NCBI-ProteinID:
XP_032414177
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All DBs
Position
3:complement(11751068..11899164)
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AA seq
1071 aa
AA seq
DB search
MPALPALLLSIRFLSFLLATMPPLSLSQAPLLSSVRIAAILDDQSVCGRGERLALALARE
NINSVIEGSVQARVEVDIYELQRDSQYDTTDTMCQILPKGVVSVIGPASSPASGSTVSHI
CGEKEIPHVKIGPEETPRLPYLRFASVTLYPSNEDLSLAIGSILRSFSYPSASLVCAKAE
CLLRLEELVRRFLISRETLSVRMLDDNLDPTPLLKEIRDDKVATIIIDANASVSYLILKK
ASELGMTSAFYKYILTTMDFPLLRLDDIVDEQSNIVGFSMFNTTHPFYLEFIRSLNLSWR
EGCDLTYPGPALSSALMFDAVHVVVGAVRELNRSQEIGVKPLSCTSPQIWQHGTSLMNYL
RMVEYDGLTGRVEFNSKGQRTNYTLRILEKHRGGHKEIGIWYSNNTLAMNSTSLDINVSE
TLANKTLIVTTILENPYVMRKDNYQDFEGNEQYEGFCVDMLRELAGILKFSFKIKLVDDG
LYGAPEPNGSWTGMVGELINRKADLAVAGFTITSEREKVIDFSKPFMTLGISILYRVQLG
RKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRERRDMLENQY
TLGNSLWFPIGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEV
PIESPDDLADQTNIEYGTIHGGSTMTFFMNSRYQTYQRMWNYMNSKLPSVFVKSTEEGIA
RVLNSKYAFLMESTMNEYHRGLNCNLTQIGGLLDTKGYGIGMPLGSPFREEITQAILQLH
ENNRLEILKRGWWDGGQCPKEEDHRAKGLGMENIGGIFVVLICGLIIAVFVAIMEFVWST
RRSAETDEVCPHTCPRRPHRHTPVSVCQEMITEFRNAVSCKKSSRMRRRRPLGSSAALRH
PTRIALGAPRPLRLVREMRLSNGKLYSGAGPLTGGAGGTGLPDLGPGPQRILDDPLGANT
TPPPPAPTPVMLPARSCSHVRICQECRRIQSLRSGSCLGSASTRIPPSSAPLPRLPPPPP
PSSSNTDSEGGGGTSPRRQQRHSPPPPSPRRIPAPPQSSNNTDLLGDQEGV
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccggctctgccagcactgctgctgtcaatacgcttcctctccttcctgctagccacg
atgccaccactctccctcagtcaggcccctctgctctcctctgtccgcatagctgccatt
ctggatgaccagtctgtgtgtgggcgcggggagcggctggcgctggccctggccagggag
aacatcaacagcgtgatagagggttcagtgcaagcccgagtggaggtggacatatacgag
ctgcaaagagactcccagtatgacaccactgacaccatgtgccagattctacccaaaggc
gtcgtctctgtgatcggtccagcctccagccccgcctccggctctactgtcagtcacata
tgtggggagaaagagatccctcatgtaaaaattggtccagaggaaacgccccgcctgcct
tacctgcgctttgcctcagttactctgtaccccagcaacgaggatctgagcctggccata
ggctccatcttacgctcgttcagctacccgtctgccagcttggtctgtgccaaggctgaa
tgcctgctgaggttggaggaactcgttcgtcgctttctcatctcgcgggagacgctgtcc
gtcaggatgctggacgacaacctggaccccacgcccctcctaaaggagatccgtgacgac
aaagtagccaccatcatcattgacgccaatgcttctgtctcttatctcatcctcaagaag
gcgtcagagctgggaatgacatcagcattttataagtacatcctcaccaccatggacttt
cccctcctgagactggatgacattgtggatgagcagtccaacatcgtgggtttctccatg
ttcaacaccacacatccgttctatttggagttcatcaggagcctgaacctttcatggagg
gagggctgcgatttgacgtatcccggccctgcgctctcttcagcgctgatgtttgatgcc
gttcatgtggttgtgggggcggtcagggaattgaaccgcagtcaggaaattggagtaaag
cccctgagctgcacctcgcctcagatctggcaacacgggaccagcctcatgaattatctt
cgcatggtggagtacgatggcctgacggggcgagtggagttcaacagcaaaggtcagagg
accaactacaccctgcggatcctggagaaacacagaggaggccacaaagagattgggatt
tggtactccaacaacactttggcaatgaactccaccagtttggatattaatgtttcagag
acgctggcgaacaagaccctgattgtcaccaccatcttggagaacccatatgtgatgcgc
aaggacaattaccaggatttcgagggaaacgagcagtatgagggtttctgtgttgacatg
ctgagggagctggcaggcatcttaaaattctccttcaagatcaagctggtggatgacggg
ctgtatggggccccggagcccaacggctcttggaccggcatggtaggagagctgatcaac
aggaaagcggacctggccgtggcaggcttcaccatcacatcagagagagagaaagttatc
gacttctctaagcctttcatgaccctggggatcagcatcttgtaccgagttcaattgggt
cggaagccaggctacttctccttcctggatcctttctctccagctgtctggctcttcatg
ttactcgcctacctggctgtcagctgtgtgctcttcctggcagcaaggttgagcccatac
gagtggtacaaccctcacccgtgtctgcgggagcgcagggacatgctggagaaccagtac
acactgggaaacagcctgtggttccccatcggcggcttcatgcagcagggatcagagata
atgcccagagccttgtccaccagatgtgtcagcggtgtgtggtgggcgttcacgctgatc
atcatctcctcttacacggccaacttggcagccttcctgaccgttcagaggatggaggtt
cccatcgagtctccagatgatttggctgaccagaccaacattgagtacggcaccattcat
ggaggaagcaccatgactttcttcatgaactcgcggtaccagacgtaccagcggatgtgg
aactacatgaactccaaactgcccagcgtttttgtgaaaagcacagaggagggaatcgcc
cgtgttctcaactccaagtatgccttcctgatggagagcaccatgaacgagtatcaccgc
ggcctcaactgtaacctcacacagataggaggactgctggacaccaagggctacggcatc
ggcatgccgctaggatctccattcagagaagagatcacacaggccatcctccagctgcat
gagaataataggctggagatcctgaagagggggtggtgggacggaggccagtgtcccaaa
gaggaggaccaccgtgccaagggtctgggcatggaaaacattgggggcatcttcgtggtg
ctgatctgcggcctcatcatcgccgtgtttgtggctattatggagtttgtgtggtcgacg
cgccgctcggcagagactgatgaggtatgcccccatacctgccctcgccggccccacaga
cacaccccagtgtctgtttgtcaagagatgatcaccgagttcagaaacgccgtctcttgt
aagaagagctcccgcatgcgccgcagacgacccctgggcagctcggcggccctgcgtcac
ccgacccgcatcgcgctcggagccccccggccgctgcgcctggtccgggagatgcggctc
agcaacgggaagctgtacagcggcgccggccccctgaccggtggggcgggagggacagga
ctgcccgatctgggccccgggccccaaaggatcctagatgatcctctcggagcaaacacc
accccgcctccgccggctcccacgcctgtgatgctgcccgcccgcagctgcagccacgtg
aggatctgccaggagtgcagaaggatccagagcctgaggtccggtagctgtttggggtca
gcgtccacaagaataccgccctcctctgccccgctgccgaggctacctccacccccacct
ccgtcctcatccaacacagacagtgagggtggaggcgggaccagtccgaggcggcagcag
cgccacagccctccgcctccgtcacctcgccgcatccccgctcccccacagagcagcaac
aacacggacctgctgggagaccaagagggagtgtag
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