Xiphophorus hellerii (green swordtail): 116717201
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Entry
116717201 CDS
T07363
Name
(RefSeq) syndecan-2-B-like
KO
K16336
syndecan 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04514
Cell adhesion molecules
xhe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116717201
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116717201
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
xhe04090
]
116717201
00535 Proteoglycans [BR:
xhe00535
]
116717201
CD molecules [BR:
xhe04090
]
Proteins
116717201
Proteoglycans [BR:
xhe00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
116717201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
BAMBI_C
MbhD
Motif
Other DBs
NCBI-GeneID:
116717201
NCBI-ProteinID:
XP_032414293
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Position
3:complement(20956148..20973794)
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AA seq
258 aa
AA seq
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MNNLWLFFLVALSTGFIGDKLLVLSHSTTSQADDLYIEEPGSGDVPIDDEDGEDDGSGSG
SGSGDHGFSILSDQDEVFRFLNITESILYKEVLPLPAQPTVSSISDPQTKSADKQDPEPD
DTDETPDSTSNFVDEDLSTSASPVDATTDFSPPVNEEILVDTKVLIKVESDNFPEGGRNN
RRNELNSPQEVTSENLWERTEVLAAVIACGVVGFLCAISLLLLLAYRMKKKDEGSYDLGD
TKMSATAYHKAPTKEFYA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaataatctgtggcttttcttcctcgtcgcgctgtcgactgggtttatcggcgacaag
ctccttgtcctgtcccattcaactacttcccaagcagatgatctttacatagaggaacca
ggatcaggtgacgtccccatagatgatgaagacggtgaagatgatggatctggctctggg
tcagggtctggagaccatggtttcagtatcctgtcagatcaagacgaagtattcaggttc
ctgaacatcactgagagcatcctttacaaagaggtgctgccacttccagcacagccgact
gtgagctccatttccgacccacaaaccaaatcagcagacaagcaggatccagaaccagat
gacactgatgagactccagactccacatccaactttgtcgatgaagacctgagtaccagt
gccagtcctgtcgatgcaactactgactttagccctcctgtgaatgaagagatcctagtg
gacaccaaagtcctgatcaaagttgaaagtgacaattttcctgaaggcggacgaaacaac
cggcggaacgagctcaactctccacaggaagtcacctctgagaacctgtgggagaggaca
gaggttcttgcagctgtcattgcctgtggagtggtcggattcctttgtgccatttccctc
ctcctcctcctcgcctaccgcatgaagaagaaggatgaaggaagttatgatttgggcgac
accaaaatgtctgcaacagcttatcacaaagcgcccaccaaggagttctatgcctga
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