Xiphophorus hellerii (green swordtail): 116717221
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Entry
116717221 CDS
T07363
Name
(RefSeq) protein argonaute-3 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116717221
03036 Chromosome and associated proteins [BR:
xhe03036
]
116717221
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
116717221
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
116717221
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
116717221
microRNA pathway
RISC loading complex
116717221
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoMid
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
116717221
NCBI-ProteinID:
XP_032414333
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Position
3:10437484..10473210
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AA seq
867 aa
AA seq
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MEIGTTGAVGPQALFSMPRRPGYGTMGKPIKLLANCFQVEIPKMDVYLYEVDIKPDKCPR
RVNREVVDSMVQHFKVTIFGDRRPVYDGKKSLYTANPLPVAPTGVDLDVTLPGEGGKDRP
FKVSIKFVSLVSWHMLHEVLTGRSMPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGR
SFFSAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLD
IHNIDEQPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVCNVTRRPASHQTFPLQLE
NGQTVERTVAQYFREKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDN
QTSTMIKATARSAPDRQEEISRLVRSANYEADPFVQEFQFKVRDEMAHVTGRVLPAPMLQ
YGGRVSTEHFMNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQRQCREEILKGFTD
QLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYAGLQLIIVILPGKTPVYAEV
KRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRPSVFQQPVI
FLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQRPRQEVIQDLASMVRELLIQ
FYKSTRYKPTRIIFYRDGVSEGQFRQVLYYELLAIREACISLEKEYQPGITYIVVQKRHH
TRLFCADRNERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGTSRPSHYHVLWDDN
CFTADEFQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHVSG
QSNGRDPQALAKAVQIHHDTLRTMYFA
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcggaactacaggagccgttgggccccaggccctgttctccatgcctcggcgg
cctggctatggcaccatggggaagccaatcaagctgctggccaattgcttccaggtggaa
atcccaaagatggatgtctacctctacgaggtcgacatcaagcctgacaagtgcccacgt
cgagtgaacagggaggtggtcgactccatggtgcagcacttcaaggtcacaatttttgga
gatcggaggccggtctatgatggaaagaagagcttgtacacagccaacccactgcctgtg
gcaccgacaggggtggaccttgatgtcacccttccaggcgagggaggcaaagaccgtccc
tttaaagtttccatcaagttcgtgtctctggtcagttggcacatgctgcatgaggtgctg
acgggccgcagcatgcctgaaccgcttgagctggacaagcccatcagcaccaaccctgtg
catgccgtggatgtagtcctgcgacacctgccctccatgaagtacactccagttggccga
tctttcttctcagccccagagggctatgaccatcctctgggaggaggaagggaagtttgg
tttggctttcaccagtctgtgcgccctgccatgtggaagatgatgctaaacattgatgtc
tctgccaccgccttttacaaagcccagccagttatccagttcatgtgtgaagtgctggat
atccacaacatagatgagcagcctcgccccctgacagactctcacagggtcaaattcacc
aaagaaatcaaaggtttaaaggtggaagtgacacactgtggaacgatgcggaggaagtac
cgtgtttgcaacgtgacccgtcggcctgccagccatcaaacgttccctctgcagttggag
aacggtcagacagtagaacgcacagtagcccagtacttcagggagaagtacaacctgcag
ctcaagtatccgcatctgccctgtctacaggtgggccaggagcaaaagcacacctacctg
cccctggaggtgtgtaacattgtagcgggtcagcggtgcatcaagaagctgacagataat
cagacctccactatgattaaagccacagctcgctctgcgcccgacaggcaggaggagatc
agcagactggtgcgaagtgccaactacgaggcggacccatttgtgcaggagttccagttc
aaagtgcgcgacgagatggctcatgtgacggggcgagtgctacccgcccccatgctgcag
tacggcggcagggtgagcactgagcactttatgaaccgcacggtagccacgcccagccat
ggggtttgggacatgagggggaagcagttccacactggagtggagataaagatgtgggcc
attgcctgcttcgccacacaaagacagtgccgggaagaaattctcaagggtttcacggac
cagctacgtaaaatctcaaaggatgctgggatgcctatccaaggccagccgtgcttctgt
aagtacgcccagggggccgacagcgtggagccgatgttcagacacctgaagaacacctac
gctggactgcagctcatcattgtcatcctgcctggaaagactccggtctatgctgaagtg
aagcgagtgggagacaccctcctgggcatggcgactcagtgcgttcaggtgaagaatgta
gtgaagacgtcgcctcagactctctccaacctctgcctgaagatcaacgtgaagctggga
ggaataaacaacatcctggttcctcaccaaaggccatcagtgtttcagcagccagttatc
ttcttgggggcagacgttacacatccgccagctggtgatgggaagaagccttcgattgca
gcggtggttggtagtatggacgcccaccccagcaggtactgtgccacagtgcgtgtccag
agaccccggcaggaggtcatccaggatctggcctccatggtgcgggagctgctcatccag
ttctacaagtcgacccgctacaagcctaccaggatcattttctacagggacggggtttca
gaaggccagttcagacaggtgctgtactatgagctgctggccatccgggaggcctgcatc
agcctggagaaggagtaccagccaggcatcacctacattgttgtgcaaaaacgccaccat
actcgcctcttctgtgccgaccgcaatgagagagttggacgcagtggaaacattcctgct
ggtactactgtggatacagacatcacacatccctacgagtttgatttttacctctgcagt
cacgctggaatacagggcaccagccgaccctcccactaccatgtattgtgggatgacaat
tgttttactgctgacgagttccagctgctcacctaccagttgtgccacacctacgtgcgc
tgtacccgttctgtctccatccctgcacctgcctattacgcccacctggtggccttccgc
gcccgctaccatttggtggacaaagagcatgacagtgccgaaggcagccatgtatcgggt
cagagtaacggtcgcgacccccaggcgctggccaaagctgttcagatccatcacgatacc
ctgaggaccatgtacttcgcctga
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