Xiphophorus hellerii (green swordtail): 116717249
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Entry
116717249 CDS
T07363
Name
(RefSeq) tumor necrosis factor receptor superfamily member 16-like
KO
K02583
tumor necrosis factor receptor superfamily member 16
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
xhe04010
MAPK signaling pathway
xhe04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
116717249
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116717249
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
116717249
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
xhe04050
]
116717249
04090 CD molecules [BR:
xhe04090
]
116717249
Cytokine receptors [BR:
xhe04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
116717249
CD molecules [BR:
xhe04090
]
Proteins
116717249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
TNFR_16_TM
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
116717249
NCBI-ProteinID:
XP_032414368
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Position
3:complement(17604170..17620178)
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AA seq
399 aa
AA seq
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MRLIVISAVLLLKVTLGKGCASEKYTESGHCCNLCPAGYGLEETCGKENTKCLPCLPGTF
SPSEGLGSCLPCSTCPSGVPILASCSATQDTQCECDVGFYFLRDFGLCAPCSRCRPGHGV
VRECRPQGDTLCQKCGPGTFSEEDLNIKPCQACSQCSDEEVEIQSCMHNFDTLCMDKKLH
IGPAGADGALNIPNGAVMEENEEEDGSPAPGPSKFTPQDEGGSNNILVYVSVLAAVVLGL
LVYVAYKCWRSCKQKKALSKARVAELAASPEGEKLQSDSGVFLDSYSLQDNQPSKGTKRD
SKLDNRLYVNLPPHKQEEVERLLQEASGRGWRHLGAALGYEPEQLDLFGRGEAPAHTLLS
NWAQREGSTLGLLSSALNRIERPDVVTALNSTQQGVSVV
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgagattgattgtcatctctgcggttctgctgttgaaagttactcttggaaagggttgt
gctagtgagaagtacaccgagtcgggacattgttgcaatttgtgtccagctggttatgga
ttggaggaaacgtgtggaaaggaaaataccaaatgtctaccatgtctgccaggaacattt
tcaccatccgaaggcctcggctcttgccttccatgtagcacctgtccgtctggtgtgccc
atactggcgtcctgttcggcaacccaggacacgcaatgcgagtgtgacgttggcttctac
tttctgagagactttggtctatgcgcaccctgttccaggtgcaggccaggtcacggggtt
gtccgggagtgcaggcctcaaggagacacgctttgccagaagtgtggcccgggaaccttc
tcagaggaggatttaaacatcaaaccctgccaggcttgcagtcagtgctctgatgaagaa
gtggagatccaatcctgtatgcacaactttgacacactctgcatggataagaagctgcac
attggccctgctggtgccgatggggccttgaatattcctaatggggcggtgatggaggaa
aatgaggaggaagacggcagccccgcaccaggaccgtccaagtttacaccgcaggatgag
ggtggcagcaacaacattctcgtctacgtgtctgttctggctgctgtggtgctgggcttg
ttggtttatgtggcttataaatgttggaggtcgtgcaaacagaagaaggccctctccaag
gcacgtgtggcagagctggcagcatctccagaaggagaaaagctccaaagtgacagcggt
gtttttctggactcttacagcctgcaggacaaccagcccagtaaaggtaccaagagagac
agcaagcttgacaaccgtctgtacgtcaacttgccgccgcacaaacaggaggaggtggag
cgcctcctgcaagaggcaagcggccgtggatggaggcaccttggtgcagcgctgggctac
gaaccggaacagctggacctgttcggacgcggcgaggccccggcgcacacgctcctgtct
aactgggcccagagagagggctccactctgggactgctgagctcggcgctgaaccgcatc
gagagacccgatgtggtgaccgcccttaacagcacacagcagggtgtttctgtggtgtga
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