Xiphophorus hellerii (green swordtail): 116717253
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Entry
116717253 CDS
T07363
Name
(RefSeq) B-cell receptor CD22-like
KO
K06771
myelin associated glycoprotein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116717253
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116717253
04091 Lectins [BR:
xhe04091
]
116717253
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
SIGLEC family
116717253
Lectins [BR:
xhe04091
]
I-type lectins (Siglecs)
116717253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
V-set
C2-set_2
ig
Ig_7
Ig_CD22
Rv1476
Motif
Other DBs
NCBI-GeneID:
116717253
NCBI-ProteinID:
XP_032414376
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Position
3:complement(10839066..10873725)
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AA seq
586 aa
AA seq
DB search
MVGPLIFLLIGSVLQGCNSFQVNLAQTVHVMTGSCVTIPCSFDVMKEHQKNLNNQCVAKW
FSSKPKAQQLIDRDPVTGNLTKKDCTTTFNKMQTNDTETYYFRLECNNSLKYSFKNSKVK
IEVTDNFPSPTLTPSTLKIKEGESVSLMCSAPAPCLPHPPTLTWTPTLGEIQETLQENRN
KTKFKTSVLNFTASLLHNKQNISCTAVYKKQDGSSDAAFTTGLMTDVLYSPKNLTVSASP
SGSVLENSNVVLTCNSNANPAEQNYTWYRADEGQENVLGTGKILNIKVSTDKKIFFCKAV
NEIGEGHSELRHIDVWFPSQILFSSNCTKTANQLNCSCETVGNPTPMTHWFLNGQPVSPS
SQVVVTNEFLDASHLRSIITVNEPQNKDLSTLLCFSSNSLGSASKQFFVSGLETSKENPG
QITLAGFIATVVAFVLVVFALLVLIWFQKTHSKPRGIGGDIDTNAYLMTEESQVPNMIED
AIYANTAELSQAEICQPSNGTDNEISESSGKKSEDLVYARVNWSRKMKAKKPENDANMKL
TGNSFSEEEKFERGDMLFVSSALEMGSLYAEVKTRNVKVNMLSLNS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggttggacctttgatatttcttctcattggctctgtactccaaggctgtaacagcttt
caggtgaatctggcgcagactgtacatgttatgacaggatcatgtgtgaccattccctgc
tcctttgatgtaatgaaggaacatcaaaagaacttaaataaccaatgtgtagctaaatgg
ttttcatctaaacccaaagctcaacaactaattgatagagatccagtaacaggaaaccta
acaaagaaagactgcaccacaaccttcaacaaaatgcagactaatgacaccgagacttac
tacttcagactggagtgcaacaatagtctaaaatacagtttcaaaaactcaaaagtaaaa
attgaggtcacagataatttcccctcaccaactctgactccgtccacactgaagataaag
gagggagagtcagtgagtctgatgtgctctgctccagctccatgtctgcctcatcctccg
acactgacttggaccccaacactgggcgagattcaggaaacactgcaggagaatcggaac
aaaaccaaattcaagacctctgttctgaacttcactgcttctctcctccacaataaacag
aacatttcctgcactgctgtgtacaagaaacaagatggaagctctgatgcagcttttacc
acaggattaatgacagatgttttatattcccctaaaaatctcacagtttcagccagtccg
tctggttcggttctagagaacagcaatgtggttctgacatgtaacagtaatgccaaccca
gcagagcagaattacacctggtatagagctgatgaaggacaggaaaatgtccttggaact
ggaaagattttgaacattaaagtttcaacagacaagaagatttttttctgcaaagctgta
aatgagattggagaaggacattccgaactcaggcatatagatgtttggttcccttcacag
atcctgttctcatcaaactgcaccaaaactgcaaatcagctcaactgctcctgtgaaacg
gtgggaaatccgactccaatgactcattggttcttgaatgggcaacctgttagtccatct
agccaggtggtggttacaaatgagtttctagatgcctcacatttgaggagcatcatcact
gtgaatgaacctcagaacaaagatctgtccaccttgctgtgcttcagctccaactccttg
ggatcagccagtaaacagttttttgtcagcggccttgagacctctaaagaaaacccaggt
caaatcacactggctggtttcattgccacagttgttgcttttgtactggtagtatttgcc
ctcctggttttaatctggtttcaaaagacacactccaaacctagagggattggaggtgat
attgacacaaatgcatatctaatgacggaggaaagtcaggtaccaaacatgattgaagat
gcaatttatgcaaacactgctgaacttagtcaagcagaaatttgccaaccttcaaatgga
actgacaacgaaatcagtgaaagttcaggaaagaaaagtgaagatctggtttatgcccgt
gtgaattggtcaagaaagatgaaagcaaagaagccggagaatgatgcaaacatgaaactc
actggcaactccttttcagaggaggagaaatttgagaggggagacatgctttttgtgagc
tctgcactggaaatgggaagtctgtatgcagaagttaagaccagaaatgtaaaagtgaat
atgctcagcttaaattcatga
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