Xiphophorus hellerii (green swordtail): 116717260
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Entry
116717260 CDS
T07363
Name
(RefSeq) caprin-2-like isoform X1
KO
K18744
caprin-2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116717260
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
116717260
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Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
116717260
NCBI-ProteinID:
XP_032414388
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Position
1:28644883..28662575
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AA seq
910 aa
AA seq
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MVQLSPSHTLPVTQDSADGEDRHGDQLDTISSPKVEDLPEGLNSPQVSLEVSTAYHGYET
YIEDGLICLKHKVRNLEKKKLKLKDYQKRLSQGEVLNKDQMVAVEKYDEVLHNLEFAREL
HKTLDGLTQNLLKAQKKVVKKEQIAKMETERRRLALVLQFQHLLGGLQQEHIRKDIMAGR
NHAPYIPAHQLHSLNQLAAVMGVKRDGRMSLAEQMDQAALVYIDLLDGRDKPVAGSTYKL
LKDELIRLLKYNFFSCLPPPPKASELSLTSANPSALKSMPKENSKELFNRLYLTDLETLN
SQNWKEDFQAVREQEPPDSWDSEFPDGPLSPQIAVNKPWKGAATFIPKVVQVPSKKHSTE
SKQRKEKKTKGQQNAKLPNQMNLLVEVFSSPSALPKDPVLRKQHLEDLMTKIHGSFSFMQ
DSLLDGETSETNRTPRLNRRSSGALSPLAQGCLRSPSDILAKTMHSTPLPPRLMDRKASV
TVVDSNVETGALEPSSNNHSQVSIKLVDRKGYSSPPLFHGEATIADQEENCTPGTESGKQ
SPCNGLRSNTSTPPQADSFSTPPMRRALTTSQFHSVFKVATSSPQNGELHYKSHTAVCSG
SKYSTASTQTPPEFAPPDDEPQMVYQSEYSAVNGGQMFLSPGQTGGGLNRSSQSYSRGSV
RGMARGGKGLAQNCRSSGWHRGGSYIPPSHLRESVPLLYAARDSGYQHVYRRGGVKHGSA
AWSDSSQVSSPDRDRAFTVVDSGHGDSLSVSTVEVPLTPHSHPPTALLPMPLYPLSQPLR
VAFTASRTANFAPGNLDQPIVFDQLHSNLGEMYDTHIGRFTCPVNGTYVFIFHILKLAIS
VPLYVNLMRNEEVMVSAYANDGAPDHETASNHAILPLFQGDQVWLRLHRGAIYGSTWKYS
TFSGFLLYQD
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctgtctccgtctcataccctgcctgtgacacaggactcagctgatggggag
gacaggcatggggatcagctagatactattagtagcccgaaggtggaggacctgccagag
gggctgaacagccctcaggtcagtctggaggtgtccacagcctaccatggctatgaaaca
tatatagaagatggcctcatctgcctgaagcacaaagtccgtaacttggagaaaaagaag
ctgaagctgaaggactaccagaagaggctgagccagggggaggtgctcaacaaagatcag
atggttgctgtagagaagtatgacgaggtgctccataacctggagtttgcacgggagctg
cacaaaaccttggatggtcttacccagaatttgctgaaggcacagaagaaggtggttaaa
aaggaacaaattgcaaagatggagactgagaggaggcgtctggccctggtgcttcagttt
caacaccttcttggtggcctacaacaggagcacataaggaaagacatcatggcaggacgc
aatcatgcaccctacatcccagctcaccagctgcacagcctgaaccagcttgctgctgtg
atgggggtcaaaagggatggcagaatgagcttggcggagcagatggaccaagctgccctc
gtctacatagaccttctggatgggagggacaaacctgtggctggatccacatataagctg
ttgaaagatgagctcatcagactgttaaagtacaatttcttcagttgtctcccgcctcca
cccaaggcttcagagttgtctctgacctcagccaacccgagtgccttaaaatcgatgcct
aaagaaaattcaaaggagcttttcaacaggctctacctgactgatttggaaactttgaac
agtcagaactggaaggaggactttcaggctgtgagagagcaggagcctccagatagctgg
gattcagaattcccagatggacctctgtcacctcaaattgcagttaacaaaccatggaaa
ggggctgccactttcatacccaaggttgtccaagtcccctctaaaaaacactctactgaa
agcaaacagagaaaagagaagaaaaccaaaggacagcaaaatgccaagttgcccaaccaa
atgaatttacttgtggaagttttcagctccccctctgccttacccaaagaccccgtactg
cggaagcagcaccttgaggacctcatgactaagatccatggctccttcagttttatgcag
gactccctcctagatggtgagacctctgagaccaaccgtactcccaggctaaataggcgc
tcatctggagcactctctcctctagcccagggatgcctgagaagcccttctgatatcctg
gccaaaacaatgcattctaccccattacctcccaggctgatggatcgcaaagccagtgtg
acagttgttgattcaaacgtggagactggagccctggagccatcctcaaacaaccactcc
caagtgtcaataaagctggttgacagaaaagggtattcctcaccaccacttttccacggg
gaggctaccattgcagaccaggaagagaactgtactccaggaaccgagtcagggaagcag
tctccctgtaacggactgagatccaacacctccactccacctcaggcagactctttctct
acacctcccatgaggcgagctctcactacatctcagtttcactctgtcttcaaggtggcc
acatcttcaccccaaaatggagaactgcactacaaatcccacactgcagtttgttccggg
tccaagtacagcaccgccagcacccaaacacccccagagtttgcgcccccagatgatgag
cctcagatggtgtatcagtcagaatactcggctgttaatggtggacagatgttcctgtcc
cctggccagacaggtggaggtttgaatcgaagcagtcagtcctacagtagaggatctgtc
agaggtatggcacgtggtggcaagggactggctcagaactgtcggtcctctgggtggcac
agaggaggatcctacatccctccctctcacctcagggagtctgttcctcttctctatgca
gctagagactcaggatatcaacacgtatacaggcgaggaggagtaaagcatggctctgca
gcctggagtgactcttcccaggtgagcagtccagaccgggacagagcctttactgttgtg
gactctggtcatggggattccttatctgtatcgacagtggaggtcccacttactccacac
agccatccgcctacagccttactccccatgccgctttacccgctctcacagccactgcgt
gtggccttcactgcctctcgcaccgccaactttgcacccggcaaccttgaccagcccatt
gtgttcgaccaactgcatagcaacctgggggagatgtacgacactcacattggtcggttc
acctgtcctgtgaacggaacgtacgttttcatttttcacatcctgaagctggccatcagc
gtccccctctatgttaacctcatgcgcaacgaggaggtgatggtatctgcgtatgccaat
gatggagcccctgatcatgagaccgccagcaatcatgccattttgcctctttttcaagga
gaccaggtgtggctcaggctgcaccgtggtgccatctatggcagcacgtggaagtacagc
acgttttcaggcttcttactttatcaggactga
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