Xiphophorus hellerii (green swordtail): 116717265
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Entry
116717265 CDS
T07363
Symbol
washc5
Name
(RefSeq) WASH complex subunit 5
KO
K18464
WASH complex subunit strumpellin
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116717265 (washc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116717265 (washc5)
Membrane trafficking [BR:
xhe04131
]
Protein recycling
Others
WASH complex
116717265 (washc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
RSF
DUF3106
Motif
Other DBs
NCBI-GeneID:
116717265
NCBI-ProteinID:
XP_032414392
LinkDB
All DBs
Position
3:24131417..24146124
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AA seq
1159 aa
AA seq
DB search
MVDFLADNNLCGQAILRIVSRGNAIIAELLRLSDFIPAVFRMKDKSDQQKYGDIICDFSY
FKGPEYYEGKLEAKPDLQDLDEEFRENNIEILSRFYLAFESVHKYIVDLNRYLDDLHEGI
YIQQTLETVLLNEDGKQLLCEALYLYGVMLLVIDQKIEGDVRERMLVSYYRYSAARSSAD
SNLDDICKLLRSTCYSAQPGAKRPANYPESYFQRVPISSTFISMVIGRLRSDDIYNQVSA
YPLPEHRSTALANQAAMLYVCLFFSPSILHTQQAKMREIVDKYFPDNWVISIYMGITVNL
VEAWEPYKAAKTALNYTLDSANVKEQGSRYAASMESLRPQVQQLLKEGFLREELILDNIP
KLLNCLRDCNVAIRWLMLHSAESAYDLNNKRLRQIKDQVLNDSKYNPRILFQLLLDTAQF
EFTLKEMFKQMLSEKQIKWESYKKEGSERMTELAEVFSGVKPLTRVEKNENLQAWFREIS
KQIESLNYEDSTAAGRKTVQLIQALVEVQEFHQLESNLQVCQFLADTRKFLHQMIRTINI
KEEVLITMQIVGDLSYAWQIIDSFTSIMQESIRVNPSMVTKLRATFLKLASALDLPLLRI
NQANSADLLSVSQFYSGELVAYVRKVLQIIPESMFTSLAKIIKLQIHNIMEVPTRLDKDK
LKDYSQLGARYEVAKLTHDISIFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVKRVAY
ALHKGLTFSPKAKPSELMPKLKDMAATMDGFYRSFEYIQDYVSIYGLKIWQEEVSRIINY
NVEQECNSFLRTKIQDWQSVYQSTHIPIPKFPSVDESATFIGRLCREILRITDPKVTCYI
DQLNTWYDLKSHQEVTNNRLFSEIQSTLGTFGLNGLDRLLCFMIVRELQNFLTMLQKTIL
KDKAVVDVFKTVLAAVNPVQGIVANASKLYASAVAKSQKIWGAYLESIMKVGQMQILRQQ
IANELNYSCKFDSKHLAAALENLNKSLLADIEAHYQDPTLPYPKEDNTLLYEITAYLEAA
GIHNPLNKIYITTKRLPYFPIINFLFVVAQLPKLQYNKNQGMSCRKATDPVDWPPLVLGM
LTLLKQFHSRYTQQFLALIGQFIRSIMEQCTSQKIPDMPSDVVGALMFLEDYVKYTKLSR
KVVEAHVPSFIFDEFRTVL
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggtggacttcctagcagacaataacctgtgtggccaggcaattctccggatagtctcc
agaggaaacgccattattgcagagctcctgcgtctttctgacttcatccccgcagtgttt
aggatgaaagacaaaagtgatcagcaaaaatatggagacattatctgtgacttcagctac
ttcaagggacctgagtattatgaggggaagctggaggccaaaccggacctacaggaccta
gatgaagagttcagagagaataatatcgagattctgtcgaggttctatttggcttttgag
agtgtccacaaatacatagtggatctcaacagatacttggatgacctccatgagggcatt
tacatccagcagactttggaaactgtgctcctaaatgaggatgggaaacagctcctttgc
gaggctctctacctgtacggagtcatgttgctggttatcgaccagaaaattgaaggagat
gtccgggagaggatgctcgtctcctattacagatacagtgccgcccgctcctctgccgac
tccaacttggacgacatctgcaagctcctgcgcagcacctgctattccgcccagcctgga
gccaaacggccggccaactacccggagagctacttccagagggttcccatcagcagcact
ttcattagcatggttattggaaggctgcgctcagatgacatctacaaccaagtgtccgcc
taccctctaccggagcatcgcagcacggcgctggccaaccaggccgccatgctttacgtc
tgcctgttcttcagcccctccatactgcacacccagcaggccaagatgagggagatagta
gataagtacttccctgacaactgggtcatcagtatctacatggggatcacggtgaacctg
gtggaggcctgggaaccgtacaaagctgccaagacggctctgaactacaccctggactcg
gcgaacgtcaaagagcagggctcccgctatgcagccagtatggagagcctgaggccgcag
gtgcagcagctcttaaaggaaggtttcctcagagaggagctcatcttggacaacattccc
aaactactgaactgtctgagagactgcaacgttgccatccgctggctgatgctgcactct
gcagagtcggcctatgatttgaacaacaagcggctgcgtcagatcaaagatcaagtgctc
aacgactccaagtacaaccccaggatcctgtttcagctcctgctcgacactgctcagttt
gagttcacactcaaagagatgttcaagcagatgctgtcagagaagcagatcaaatgggag
agctacaagaaagagggatctgagagaatgaccgaactggccgaagtcttctccggggtc
aagcctctcaccagggtggagaagaacgagaatttacaagcgtggttcagggaaatctca
aagcagatcgagtctttgaactatgaggactccacagctgctgggaggaagacggtgcag
ctgatccaggctcttgttgaggtccaggagtttcaccagctggagtccaacttgcaggtg
tgtcagtttttggccgacaccaggaagttcctgcaccaaatgatccgcaccatcaacatc
aaggaggaggttctgatcaccatgcagatagttggagatctttcgtacgcgtggcagata
attgacagctttacatctattatgcaggagagcatcagagtcaacccatccatggtcaca
aagctcagagccacatttctgaagctggcttccgcgttggatctgccgttgctgcgcatc
aaccaggccaacagcgccgacctgctgagtgtctcccagttctactctggagagttggtg
gcttacgttagaaaggtgcttcagattatcccagagagcatgttcacctctctggccaaa
atcatcaaacttcagatccacaatatcatggaagtgcccacgcggctggataaagacaag
ctgaaggactactcccaactaggagcccgttacgaagtggcaaaactcacccatgacatc
tctatcttcactgaaggcatcttgatgatgaagaccaccttagtgggaatcatcaaagtg
gatcccaagcagcttttggaagatggcatcaggaaggagctggtgaagagggtggcgtat
gctttgcacaaaggcttaaccttcagccccaaggctaagcccagcgaactgatgccgaag
ttgaaggacatggcggccaccatggacggcttctacaggtcatttgagtacatccaggac
tatgtcagcatttatggccttaaaatctggcaagaggaagtttctcgcatcatcaactac
aatgtggagcaggaatgcaacagtttcctcaggaccaagatccaggactggcagagtgtc
tatcagtccacacacatccccattccaaaattcccgtctgtggacgagtcagccaccttc
atcggtcgtctctgtagagagatcctacgaatcaccgatccaaaggtgacatgttatatc
gaccagctgaacacctggtacgacttgaagagccaccaggaagtgaccaacaacaggttg
ttctctgagatccagagcaccctgggcacatttggtctcaacggactcgaccgactgctc
tgcttcatgatcgtcagggaacttcagaacttcctgacaatgctccagaaaaccattctt
aaggacaaagcagtggtggatgttttcaaaactgtgctagctgctgtcaacccagtacaa
ggcattgtggctaatgccagcaaactctatgcaagtgctgtggccaaatcacaaaagatc
tggggtgcatatctggaatccatcatgaaggttggccagatgcagattctccggcagcag
attgcaaatgagctgaactactcctgcaagtttgactccaagcacctggcagctgctctg
gaaaatctcaacaagtctctgctagcagacattgaggcccactaccaagacccaaccctg
ccctatcctaaagaagacaacactcttctgtacgagatcactgcctacctggaggccgct
ggcattcataacccactcaataagatatacatcacaacaaagcgtcttccgtacttcccc
atcatcaacttcctgtttgttgtggctcagctgcctaagcttcagtacaacaagaaccag
ggaatgagctgcaggaaagctacagacccagttgactggccaccactagtactcgggatg
ctcacgctcctcaagcagttccactccagatacacgcagcagttcctggctctcatcggt
cagttcatccgatctatcatggagcagtgcacaagtcagaaaatcccagacatgccttca
gatgtggtgggagcgctgatgttcctcgaagactatgtgaagtacacgaaactctcacgc
aaggtggtcgaagctcacgtgcccagttttatttttgatgagttcagaacagtactgtga
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integrated database retrieval system
