Xiphophorus hellerii (green swordtail): 116717334
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Entry
116717334 CDS
T07363
Symbol
rpa2
Name
(RefSeq) replication protein A 32 kDa subunit
KO
K10739
replication factor A2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03030
DNA replication
xhe03420
Nucleotide excision repair
xhe03430
Mismatch repair
xhe03440
Homologous recombination
xhe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116717334 (rpa2)
03420 Nucleotide excision repair
116717334 (rpa2)
03430 Mismatch repair
116717334 (rpa2)
03440 Homologous recombination
116717334 (rpa2)
03460 Fanconi anemia pathway
116717334 (rpa2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xhe03032
]
116717334 (rpa2)
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116717334 (rpa2)
DNA replication proteins [BR:
xhe03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
116717334 (rpa2)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
116717334 (rpa2)
MMR (mismatch excision repair)
116717334 (rpa2)
DSBR (double strand breaks repair)
HR (homologous recombination)
116717334 (rpa2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
TFA2_Winged_2
Irp3-like_C
Motif
Other DBs
NCBI-GeneID:
116717334
NCBI-ProteinID:
XP_032414529
LinkDB
All DBs
Position
3:complement(8460169..8467058)
Genome browser
AA seq
278 aa
AA seq
DB search
MWNQGGYSESGMVGGYTQSPGGFASPSLSQGGEKKGRTRATQIIPCTVSQLMSASQVDEV
FRVGDVEVTQVTIVGIIRSTDKSMTNIQYKVDDMTGAPMDVKQWVDTEDPSVDSTVLPPG
TYVKVSGNLRSFQNHRSVVAFSVRTLEDMNEITSHILEVVHAHMALGKPQTMPAIGGGMA
VNSMPMLQQGPGMTAGSYAGTNENPLMVINGLSGNQNQVLSLIKGCPDPQGISIQDLKQR
LSGISLAVIKQAVEFLSNEGHIFSTIDEDHYKSTDNDD
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtggaatcagggaggatacagcgagtctgggatggtggggggctacactcagtcccct
ggaggatttgcatccccttccctgtcccagggaggagagaagaaagggaggacccgggcc
acacaaataatcccctgcacagtgtcccagctgatgtccgcctcgcaggtcgatgaggtc
ttcagagtgggagatgtggaagtgacacaggtcaccattgtgggcatcattagaagtaca
gacaaatctatgaccaatatccagtacaaggtggacgacatgactggcgctcctatggat
gtgaagcagtgggtagacacagaggacccgagtgtggacagcacagtgttgcccccagga
acctatgtgaaagtgtcagggaatctgcgctcctttcagaaccacagatctgttgtggca
ttcagcgtcaggaccctggaggacatgaatgaaattacatcgcacattctggaggttgtc
catgcgcacatggcgcttggcaaacctcaaaccatgccagctattggtggaggaatggct
gtaaacagcatgccaatgctccaacaaggcccagggatgactgcagggagctatgcaggc
accaatgagaacccactaatggtcattaatgggttaagtgggaatcagaaccaggtgctg
agtttgataaaaggctgtccggaccctcagggtattagcattcaggatctgaagcaaagg
ctcagcggcatcagtcttgcagtgatcaaacaagcagtggaattcctgagcaatgaaggc
cacatcttttcaactatagacgaggatcactacaaatcaacagacaacgacgactaa
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