Xiphophorus hellerii (green swordtail): 116717341
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Entry
116717341 CDS
T07363
Symbol
hdac9
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116717341 (hdac9)
Enzymes [BR:
xhe01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
116717341 (hdac9)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
116717341 (hdac9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HDAC4_Gln
TFIIA
Motif
Other DBs
NCBI-GeneID:
116717341
NCBI-ProteinID:
XP_032414541
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All DBs
Position
3:18400007..18424624
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AA seq
628 aa
AA seq
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MLQTIYEGESSFSTTEGRVGHQHLPNQSKMHNMNNSVDIKPDVPLAVEPLSPLDLRTDLR
MLGPGSDPGLWERQLQQELLLIQKQQQIQKQLLISEFQKQHEKLTRQHQAQLQEHLKLQQ
ELQAMKQQQELAEKERRLEQQQQQQQQQNQQEKELEWHRREQHVSSLSLRGKERSRESLT
GAVASTEVKQKLQEFLLNKSAKDPVTNGASHSFIQHPKLWYTSSHHASLDQSSPPLGGTS
PTCQYTLPSPIESKDDFPLRKTASEPNLKVRSRLKQKVAERRSSPMLKRRDGNIITPYKK
RALELMDSAPTNSAPGSGPSSPIGASSALGAENGPSSLPTTTKTERWPSQPRLFRPEGSV
SMLSLYTSPSLPNISLGLSTTSTPISAAMGLNDRSTEIKHGLPGHLLGPVPLQTALESKV
SPSHQALLQHLLQKEQIRQQKIISSGQGSMSSHAQSPLIMKDRPSSSRPKLPKHRPLNRT
QSAPLPQNTLAQLVIQQQHQHFLEKQKQYQQQVHINKLLSKSIEQLRQPSTHLQESEEEQ
EEQQPREETASMQEDRLPPGGVIRKHTLSSSSSGSSSSELPDAHCGVIKVKEEPADSEDE
ALTNRRLVSEQSTYLHQVKGRLVIRAMI
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagacgatttacgagggcgagtcaagtttctccacaacagaggggcgcgtcgga
caccagcatctccccaaccagagcaagatgcacaacatgaacaactcagtcgacattaag
ccagacgtgccattggctgtggagcccctgtcccctttggacctacgcacagacctgagg
atgctggggccaggctcagaccccggactgtgggagaggcagctccagcaggagctgctc
ctcattcagaagcagcagcagatccagaagcagttactgatcagcgagtttcagaagcag
cacgagaagctgacccgtcagcaccaggctcagcttcaggagcatctcaagctccagcaa
gagctccaggccatgaagcagcagcaggaactcgctgagaaggagcgccgtctagagcag
cagcagcagcagcaacaacaacagaaccagcaggaaaaagagctggagtggcatcgacga
gagcagcatgtctccagcctgagcctcaggggcaaggagcgctcccgagagagtctcaca
ggtgcagtggccagcacagaggtgaagcagaaactccaagagtttctgttgaacaaatct
gcaaaggatccagtcactaatggagccagtcactctttcatccaacatcccaaactctgg
tacacgtcctcacaccacgcatccctggaccaaagctctccaccactggggggcacatcg
cccacctgccagtacactctgccgtcacctatcgagagcaaggacgacttccccttgagg
aagacagcatctgagccaaatctgaaggtacgatccagactgaagcagaaggtggcagag
aggagaagcagtccaatgctgaagagaagagacggaaacatcattactccttacaaaaag
agggctttagagcttatggattcagcgccaactaacagcgcccctgggtctggccccagc
tctcccataggggcctctagtgccttgggggctgaaaatggaccctcctctctgcctaca
acaacaaaaactgagaggtggccttcccagccaagattattccgacctgagggctccgtg
tccatgctgagcttgtacacatctccatccttacccaacatctccttggggctctctact
acatccacaccaattagtgctgctatgggcttaaatgacagatcgacggaaatcaagcat
gggttgcctgggcacctgctgggccctgtgccacttcagacagccctggagtcaaaggtc
agccccagccaccaggctctgctccagcacctcctccagaaggagcaaatcaggcagcag
aagatcatctcttctggtcaaggctccatgtcctcccacgctcagtcccctctgatcatg
aaggatcggccctccagcagtcgccctaagctaccaaaacacagacccctgaacagaacc
cagtcggcacctctgcctcagaacacactggcccaactcgtcatccagcagcagcaccag
catttcttggagaaacagaaacagtaccagcagcaggtccacataaataagctgttatcc
aagtccattgagcagttacgtcagcccagcacacacctgcaggaatcagaggaggagcag
gaggagcagcagcctagagaggagacggcgagcatgcaggaggacaggctgccccctgga
ggagtcattcggaagcacacgctaagcagcagcagcagtggcagctcgagcagcgagctc
ccagatgctcactgtggggtcatcaaggtcaaagaggaaccagctgatagtgaggatgag
gctctgaccaatcggcgcctagtatccgaacagagcacctatctccaccaggtcaaaggg
aggctggtgataagagccatgatctga
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