Xiphophorus hellerii (green swordtail): 116717368
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Entry
116717368 CDS
T07363
Symbol
carmil1
Name
(RefSeq) F-actin-uncapping protein LRRC16A isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116717368 (carmil1)
Membrane trafficking [BR:
xhe04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
116717368 (carmil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Motif
Other DBs
NCBI-GeneID:
116717368
NCBI-ProteinID:
XP_032414592
LinkDB
All DBs
Position
3:complement(21348500..21402034)
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AA seq
1414 aa
AA seq
DB search
MSEESSDVPKELLESVRDAVGRKVKLSLRKRVKLEIKGDKTENRVLALATHRAYLLTARI
PAKVEHSFNYLEIQGIASSKPTQLLVEYERGSFSVKLLSTEEVNDVVAHVGNCLLRICPG
LPPSKVMKKLCMEPPDRLSYLQNLWENKPAEPGPCGGFSQMYRCVCDWLGLPYREEVQWD
VDTIYLTQDSRELNLQDFSHLENRDLVAIIAVLEFNQWFTKLSTKDYKLSADVCEQILRV
VSRSSRLEELVLDNAGLKTEFAQKLAAALAHNTSSGLASINLANNPLEDRGVSALGVQFA
KLRLGLKHLNFSKTSISPKGVNSLCQSLSANPSIASSLVHLDLSGNMLRGDDMQHFYNFL
GQPNSLATLDLSNTDCTLDQVCSALLRGSAQHLSVLNVSKSIFPHRKGKEVPPSFKHFFS
SATSLSSINVSGTKLPPEALKALLLGLASNPSLKDVSLDLSCCELGHCLRSGGSQILEGC
IAEIPNISSLDLSDNGLDSELSTLLVWLAKNRSIKHLSLGKNFNNIKSKNLAPVLDGLVH
MIQEEELPLTSLSLADSRLKSDLTIVLNALGSNSTLTRLDISGNAMGDMGAKMLAKALQI
NSKLRTVIWDKNNTSPQGLQDVATALEKNFTIRFMPIPIIDASQALKASPEKTEDALLKI
ETYLYRNHETRKYLQEQAYRLQQGIVTTTTQQMIDRICVKVQDHLNSLKNSEADAILEDV
RSAENLIKDARNSKTLLRNLYHLGSASREELNSSSAGPIQEKLESMAGEVTTVMDQQLQS
LLESMMDTAESLCPHVMKRGNLRPELMKASSTKMVVPKCFVTQTLLEQSGVDIINKISEV
KLSLASFLSDRIVDEILEALSTSQLTLADHLVQRGRRLVQQESMDLDVPEEKIPKRASAE
ILEAERLEDLETCMILCCTSMTPKSKRKSIHSRMLRPVSRAFEMEFDLDKALEDVPIYME
DASTSSQTPPTPSVGGPKAEQRPTGAIAELPSEEEKKLQHFTKLRPRRNKKMHSSKVAQI
NSTPSQDGGEQNGLMGRVDEGVDEFFSKKVTKMDSKRSSKSSESQDGEKKKSKGGFLNLI
KRSSKSDKSDKSDKSDKSEKSQAAPTSCGAPAASAAASAIPEEPSSPKVAVRSPPPEPKS
RDSSTRSQPTDYSSSSDRSEELRTPDSIDEPWEGSDGRGSPQGGKRYTGVQMMGSGLLAE
MKAKHERRAYKSSSPDRPDSNAAAKSQSSTTESKTSSCPTNKTNAAAAEKSSPHSEAKSE
PSARPRATSSSTSPAGPVNPKPPVPQGAKPALAARPTIPQKPRANSSRSIDESSASPIGS
GHVSPKILPSTLKRTMSEKDKEPILQTGVSTNKSPQEVKSASDAAQRSSPHCTNTDDPGS
FKTKDNCANTDKSKATRKKSSDSGEEADKDFILI
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaatcgtctgatgttcctaaagagcttctggagagtgtgagggatgcagtg
gggaggaaggtgaagttgtcactgaggaaaagagtcaaattggaaatcaaaggagacaag
acggagaacagagttttggctcttgcgactcaccgagcctacctcctaacagcacgcatt
ccagccaaggtggaacactcctttaattatctggagatccagggaatagcttccagcaag
ccgacccagctactggtagagtatgagcgaggctcgttctcagtgaagctgctctccaca
gaggaggtgaatgatgtggtcgctcatgtaggaaactgtctgctcaggatatgtcctggt
ttaccacccagtaaagtgatgaagaagctttgcatggagcctccagaccgactgagctac
ctgcagaatctgtgggaaaacaagcctgctgaacctggaccttgtggtgggttttcccag
atgtacagatgtgtgtgtgactggttaggactaccttacagagaagaagtgcagtgggat
gttgacaccatctacttgacacaagacagcagagaactcaacctgcaggacttcagccat
ctagagaacagggatctggtagctataatagcagtcctggagttcaaccagtggttcacc
aagctgtctaccaaggattacaaactgtctgcagacgtatgtgagcagattcttcgagtg
gtgtctcgatccagtcgactagaggagttggtgttggacaacgcaggactcaaaacagag
tttgcccagaagctcgctgctgccctggcccacaacaccagctcaggacttgcttccatt
aatcttgctaacaatccactggaagacagaggtgtttctgctctcggtgtgcagtttgct
aaacttcgtttggggctcaagcatttaaacttttccaaaacctcaatctcacccaaaggg
gtgaacagcctttgccagtcactgagtgccaacccatccatcgccagcagcctagtccat
ctggacctctcaggaaacatgctccgaggagacgacatgcagcatttctacaacttcctc
ggtcaacccaacagcctggcaacactagacctctccaacacagactgcacactggatcag
gtttgctcagctctgctgcgaggctcagctcaacacctctctgttctcaatgtgtccaaa
agcatcttccctcacaggaaaggcaaagaggtgcctccatcatttaagcatttcttcagc
agcgccacgtctctcagctccatcaatgtgtcgggaaccaagctgccgccagaggctctc
aaagcacttctactcggcctggccagtaatcccagtttgaaggatgtctcactggatctc
agctgctgtgagcttgggcattgtcttcgttcgggtggttcacagatccttgaaggttgt
attgcagagatcccaaacatctccagtctggatctttcagataatggcttggactcggag
ctgtccactcttcttgtttggttagccaagaaccgctccatcaaacacctgtccttggga
aagaacttcaacaacatcaagtccaaaaaccttgctccagtattggatggcctggttcac
atgattcaagaagaggagttacccctcacctctctgtctttagcagactccagactcaaa
agtgacctgaccatcgtcctcaatgccctcggcagcaactccacgctcaccaggctggac
atcagcggcaacgctatgggggacatgggagccaagatgctggcgaaggcattgcaaatc
aactcgaaactcaggactgtaatctgggataaaaacaacaccagccctcagggccttcag
gatgtagcaaccgctctggagaaaaattttaccattcgcttcatgcccatcccaatcatc
gatgcctcgcaggccctgaaggccagccctgagaaaacagaggatgccttgttaaagatt
gagacgtatttatacaggaatcatgaaaccagaaagtacctccaggagcaggcctatcgc
cttcagcagggcatcgtaaccacaaccactcagcagatgatagaccgaatttgtgtcaaa
gtccaagaccatttgaactcactgaagaactccgaggctgacgccatcttggaagacgtc
agatcagcggaaaatctcatcaaagatgcaagaaactctaaaacgctgctccgtaacctt
taccaccttggatcagcatccagagaggagctgaacagttcatcagcaggtcccatccag
gagaaactggagtccatggctggagaggtcaccaccgtcatggatcagcaactccagtct
ctgctagagtccatgatggacactgcggagtctctgtgtccacatgtgatgaagagggga
aatcttcgtccagagttgatgaaggcaagctcaactaagatggttgtacctaaatgcttc
gtcactcaaaccctcctggagcagtctggggtggatattatcaacaagatcagtgaagtg
aaactgagtctggcctcctttctgtcggatcgcatcgttgatgagatcttagaggctctc
tccacatcacaactcacactggcagaccatcttgtgcaacgaggacgccgcttggtgcag
caggagtctatggatctggacgtgcctgaggagaaaattcctaaacgagcatcggctgag
atactagaggcagaaaggcttgaggatctggaaacatgcatgattctgtgctgcaccagc
atgactcctaagtcgaaaaggaaaagcattcacagcagaatgctgcggcctgtgtctcgt
gcctttgagatggagtttgatctcgataaggccctggaggatgttcccatctacatggaa
gacgcctccacttcgtcccaaactcctcccactccatctgtaggtgggcccaaagcggag
cagcgtccgaccggagcgatcgcagagctgccgtctgaggaagagaagaaactgcagcat
ttcaccaaactacgaccgcgaaggaacaaaaagatgcattctagtaaagtagctcaaatt
aacagcactccatctcaagatggcggtgaacaaaatggtctgatgggcagagtggatgaa
ggagtggatgagtttttttctaagaaagtcaccaagatggattcaaaacggtcttcgaag
agctcggaatctcaagatggagaaaagaagaagagtaaaggaggatttctgaatctcatc
aagcgatcctccaaatccgataagtctgataaatctgacaaatcagataagtcagagaaa
agtcaagcagctccaacatcctgtggtgcgcccgcagcctctgctgcagcctctgcgatc
ccagaggagccctcctctccaaaggtggcagtcaggagcccacctcctgaaccaaagtca
agagactcctccacccgctcacagcccacagactacagcagcagctcagaccggtccgaa
gaactgaggactccggactccatagatgaaccctgggagggttcagacggcaggggaagt
cctcaaggtgggaagaggtacactggagtgcagatgatgggaagtggcctcttggcagag
atgaaagcaaaacatgagaggagagcatacaagtcttccagccctgacaggcctgacagc
aatgcagcagccaagtcccagtcctcaactactgaaagcaagacttccagttgtcccact
aacaaaaccaatgctgctgctgcagaaaagtcctcaccccatagtgaagccaagtctgaa
ccttccgctcgtcccagagctacgtcttcctcaacttcccctgcaggaccagtaaaccct
aagccaccagtgccacaaggagcaaagccagccctggctgcacggcccaccatcccccag
aagccgagggccaacagcagcaggagcatagatgagagttcagcttcccccatcggcagc
ggccatgtatctcccaaaattctgccatccaccctaaaaaggacaatgtcagaaaaagac
aaggagcccattctgcagaccggagtttccaccaataaaagccctcaggaagtgaagtcg
gcatcagacgctgctcagagatccagccctcactgcaccaacactgatgacccaggctcc
tttaaaaccaaggacaactgtgcaaacacagacaaaagcaaagcaaccagaaagaagtcc
tcggactcgggggaagaggcagataaggactttatactaatatga
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integrated database retrieval system
