Xiphophorus hellerii (green swordtail): 116717372
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Entry
116717372 CDS
T07363
Symbol
nfatc2
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 2 isoform X1
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04020
Calcium signaling pathway
xhe04148
Efferocytosis
xhe04218
Cellular senescence
xhe04310
Wnt signaling pathway
xhe04370
VEGF signaling pathway
xhe04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
116717372 (nfatc2)
04370 VEGF signaling pathway
116717372 (nfatc2)
04020 Calcium signaling pathway
116717372 (nfatc2)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116717372 (nfatc2)
09143 Cell growth and death
04218 Cellular senescence
116717372 (nfatc2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
116717372 (nfatc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116717372 (nfatc2)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
116717372 (nfatc2)
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
116717372
NCBI-ProteinID:
XP_032414606
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Position
1:29100387..29130021
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AA seq
893 aa
AA seq
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MTSFYDEKDLEEDLSRANCPDEDLQFEYLFEYEPPCSDFAGDQDDPGLASHKVLRPESEQ
VFPLDEQYRIKSCNSPYSNLNPEVLSGYENQEARNYLDNTRPPGLALSPRIEITPSREHY
SHGRDSLPNQHLNLSPRPTLTVPGHESLAYREPQCLSPASSNSSTSWHSESYSPWASPCV
SPSSGPNPADLCPRMQNIHTCSPRTSPGTSPHTSLGEDGGLGARSPSPRPRSTSPQGKRT
YEMYRNPGLIPGQRSRSPSPHSGQENPNTGAHFAHVVEGVNGFGSSQPGMVPTKIVKTSN
QLYALIPENHGDGNYCDQDIKTKPAAEPFYVIPSIWPKPLVPNICSLPLTTAPPLEWPLP
SRTDQYELHIEVQPKPHHRAHYETEGSRGAVKAPTGGHPVVQLHGYRGKDPVGLQIFIGT
ADERILKPHAFYQVHRITGKTVTTNSYERIINGTKVLEIPLEPKNNMKAIIDCAGILKLR
NADIELRKGETDVGRKNTRVRLVFRVHIFQPGGQDVCLQVASHPIECSQRSAHELPMVEK
QDMDSCSVLGGQQMILTGQNFSSDSKVIFLEKSHDGQQLWEMEATVDKDKSQPSMLFVEV
PSYHDTSICQPVKVNFYVINGKRKRSQPQHFTFNPLTSPAIKTEPLDEYEAQNMSFGIPQ
ILGLSPQSYYHNPRGILHPDNGLMSGMASCQRFSPNLPNQDARFQQQSPAIVYSRGGKSL
SSSPGTWHSGGVIPDPHRSVLVHTGSPAQSVGPISSGQHPSIIQFSPTNHHLLRAGDAET
LPPPQPDNQQILFCDDYPPQAGSHSPGHPQAQAAVTHQQPCPTVIQQQQQPFGQKEPQKV
RVSPGTQPMEVTEEEQRRVTVKEENLDQAYLDDGELNEIIRKDLTGVQARGQT
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgacctccttctacgacgaaaaggatctggaggaagacctcagtcgagccaattgccct
gatgaggatttgcagtttgagtacttgtttgaatatgagccgccttgcagcgactttgca
ggagatcaagatgaccctggccttgcctctcacaaggtcctccgtcctgaatctgagcag
gttttccctttggatgagcagtacaggatcaagtcctgcaactccccttactccaacctc
aaccccgaagttctctcagggtacgaaaaccaggaggccagaaactacctggacaacacc
cgtccaccaggtctggccctgagcccccggatcgagatcaccccgtcccgagagcactac
agtcatggccgggactcgctgccgaaccagcacctgaacctcagccccagacccaccctc
actgtgcccggccatgagagcctcgcctaccgtgagccccagtgcctgagtcccgccagc
agcaactcctccaccagctggcactctgagagctactcgccctgggcgtccccctgtgtt
tcacccagtagcggcccaaatccagcagatctctgcccccgcatgcagaacatccacacc
tgctccccacgcacctccccgggtacctcccctcacaccagcctcggagaagacggcggc
ctgggagcacgctcgccctcgccccgaccgcgctccacctccccgcagggcaagcgcacc
tacgaaatgtaccggaatccggggctgatacctgggcagcggtcccgcagtccgtcccct
cacagcggccaggagaaccccaacacgggagctcatttcgcacacgttgttgagggcgtg
aatggatttggcagcagtcagccaggcatggtgcccaccaaaatagtcaagacctccaac
caactttacgctttaatcccagagaatcacggagacgggaactactgtgatcaggacatt
aaaaccaaacctgctgcagagcctttctatgttatcccatcaatctggcccaagccgctg
gttcccaatatctgcagcctcccattgaccacagccccaccactggagtggccccttccc
agtcgcacagaccagtatgagctccacattgaggtgcagcccaagcctcaccacagggct
cactatgagacggagggaagcaggggcgcagttaaagcccccacaggaggacatccagtg
gtgcagttgcacggctacagaggcaaagatccagttggcctccagatttttattggtacc
gcagatgagcgcatcctgaagcctcacgccttttatcaagttcaccggatcaccggcaag
acggtcaccaccaacagctacgagaggatcatcaacggcaccaaagtcctggagatccca
ttggagccaaagaacaacatgaaagccataatcgactgcgctggcatcctgaagctcagg
aacgccgacatcgagctgaggaaaggcgagacggatgtcggtcggaaaaacacccgggtc
cgacttgtgtttcgcgtgcacatatttcagcctggaggtcaggacgtctgtctgcaagtg
gcctcgcatcccatcgagtgttctcagcgttctgcacacgagcttcccatggtggagaag
caggatatggacagctgctccgtcctgggcggccagcagatgatcctgactgggcagaac
ttcagctccgactcaaaggtcatcttcctggagaagagtcacgatggccagcaactctgg
gaaatggaagcaacggtggacaaagacaagagccaacctagcatgctgtttgtggaagtg
ccatcttaccatgatacatccatatgccaacctgtcaaagtgaacttctacgttattaac
ggcaaacggaagcgcagtcaacctcagcatttcaccttcaacccactgacatctcctgcc
ataaagacagaacctctagatgaatatgaagcacaaaatatgagctttggtattcctcag
atcttgggcttatcgcctcaatcctattaccacaaccctcgcggcatccttcacccagac
aatggcctaatgtccggcatggcttcctgtcagcgcttcagccccaaccttccaaaccaa
gacgcgcgtttccagcagcaaagcccggctattgtctactctcgaggtgggaagagcctc
agtagcagcccaggcacgtggcactccggcggggtcatacctgacccccaccggtcagtg
ctggtccacacaggctcaccagctcagtctgtaggtcccatcagttcaggccagcaccca
tctatcatccagttctcccctaccaaccaccacctgctcagggctggagacgcggagact
ctccctcctcctcagcctgataaccagcagatacttttctgcgatgactaccctccgcag
gctggatcccactcacctggacacccccaagcccaggcagcggtgacccaccagcagcca
tgtcccaccgtcatccagcagcagcagcagccgtttgggcagaaggagccccaaaaggtc
cgggtgtcgcccgggacacagccgatggaggttaccgaagaagaacagaggagggtgacg
gtcaaggaggagaacttggaccaggcctacctagatgatggtgagttgaatgaaatcatc
agaaaggatctgacgggggttcaggccagaggtcagacatag
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