Xiphophorus hellerii (green swordtail): 116717401
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Entry
116717401 CDS
T07363
Symbol
tmc4
Name
(RefSeq) transmembrane channel-like protein 4
KO
K21988
transmembrane channel-like protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhe02000
]
116717401 (tmc4)
03037 Cilium and associated proteins [BR:
xhe03037
]
116717401 (tmc4)
Transporters [BR:
xhe02000
]
Other transporters
Pores ion channels [TC:
1
]
116717401 (tmc4)
Cilium and associated proteins [BR:
xhe03037
]
Other cilia and associated proteins
Stereociliary proteins
116717401 (tmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
116717401
NCBI-ProteinID:
XP_032414653
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Position
3:14373944..14382948
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AA seq
698 aa
AA seq
DB search
MTIEQQRQGSAFSGSGHPTDQESLRFRRVSSRMSTQIYHEPNSSTSLAQEEEQSGSKPTL
ELRNTVFPMALKKAARQVQQMQVPAQFNGGSWKQKRIKFVRQFKSNVREFLYFFSLWGKT
LQKIGGNFGGGVQSYFIFLRFLVILNFVSFLLIAGFVLIPSIVFRSVGIKPESSEADVSS
ECLKYDPNPQGLVVFYEFFLDLLSGTGFMEYSYLFYGYYNNSVIVTSLVGSHFSYNIPLA
YLLTAVFYFAFCLICIIVRMGKAARVAVTTGGSDVRSYSMIVFTGWDYGCLGSKATKLKQ
RNIYYRLQVDLEEERLKKHAASLTLCNKVTLHSLRVLMFFVAVGLIVATFFAIASATTFS
QQNSHVPGILGLFYTYLPSIVITLGNFLVPLLCDQIALLEKYPPSATVVVALLRAVVLRL
VSLGILLFTLWKQIMCHENRDKCNLCHYNHEDYQCWETSVGQEMYKLTLFDLLVSIALLV
LVEFPRRMVVDHWSCKLTQWVGRQEFVVPSNVLGLVYGQTVVWTGALFCPMLPLINTVKF
VILFYCKKITLFHNCRPALRTFRSTTSAIFFLAVLLFGWILALVVMIYSVAVIHPSFACG
PFRSFFRMWKIVPESFSTLPEGARDFLFFIGSQAFSIPLFAISCVFMCYFIALASIYGKS
VAMLRAQLKLAGQDKQFLVKQIEKMKLLSPQHNEGEQD
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgagcagcaaagacaaggctcggcattctcaggaagcggtcatcctactgac
caggagtcgctcaggtttcgccgggtttcttctcgaatgtccactcagatctaccatgaa
cccaacagcagcacaagcctggcacaggaggaggaacagagcggttctaagccgaccctg
gagctcaggaacacagttttccccatggctctgaaaaaagctgcacggcaagtgcaacaa
atgcaggttcctgctcagttcaatggaggatcctggaaacaaaaaaggatcaaatttgtg
cgtcaattcaaaagtaacgtcagagagtttctctacttcttctcactgtggggcaaaacc
ttgcaaaagattggaggaaactttggaggtggagtccaatcttacttcatcttccttcga
ttcttggtgattctcaattttgtgtccttcctgctgattgctggattcgtcctcatcccc
agcatcgtgttcagatcggtgggcatcaaaccggagagcagcgaagctgatgtttcgtca
gaatgcttgaagtatgacccaaatcctcaaggcctggtggtcttttatgagttcttcctc
gatctactgtcaggaacaggtttcatggagtattcatacttgttttatggatactacaac
aacagtgttatagttacttccttggtgggcagccacttttcctacaacatccccctggcc
tatctgctcactgccgtcttctactttgccttttgtctcatttgcatcattgtacgaatg
ggcaaagcggctcgagttgccgtgacgaccggaggcagcgatgtgaggagctacagcatg
atcgtcttcaccgggtgggactacggctgcctgggaagcaaagccaccaaactaaaacag
aggaacatttactaccggctgcaggtggatctggaggaggagcgtctaaagaagcatgca
gcgtccctcactttgtgcaacaaagttactttacactctctgcgtgttttgatgtttttt
gtcgcagtcgggctcatcgtagcgaccttctttgccattgcttctgcaactacattcagc
cagcaaaacagccatgtaccagggatcctgggattgttttatacgtatctgccgtccatc
gtcatcaccctagggaacttcttggtgcctctgctgtgcgaccaaattgctttgctagaa
aaatatcctcccagcgctactgtggtagtggcactattaagggcagttgtcttgcgtctc
gtcagtctgggcatccttctcttcaccctctggaaacagatcatgtgccacgaaaataga
gacaagtgtaatctgtgtcactacaaccacgaagattaccagtgctgggaaacaagtgtg
ggacaggagatgtacaagctgacgctgtttgacctccttgttagcattgctcttctcgtg
ctggttgaatttccacgcaggatggtggtggatcactggtcctgtaagttgacccagtgg
gtgggccggcaggagtttgtggttccctccaacgtcctgggccttgtttacggtcagact
gtggtgtggactggagctctcttttgccccatgctgcctctcatcaacacggtcaagttt
gttatcctcttctattgcaagaagatcacacttttccacaactgtcgtccagcgctgagg
acatttcggtccacaacctccgccatctttttcctggccgttctcctgttcggctggatc
ctcgccttggttgtaatgatttacagcgtagctgtgatccatccgtcatttgcttgcggg
cctttccgttccttctttaggatgtggaagattgttccagagtccttctccactcttcct
gaaggagcaagagattttctcttcttcattggctcacaagctttctccatacctctgttt
gctatatcgtgtgtgtttatgtgctacttcatcgctttagcctctatctatggaaaatct
gttgcaatgctgagagctcaacttaaattggcaggacaggataagcagttcttggtgaag
cagattgagaagatgaagcttctgtcaccacagcacaacgaaggagaacaagactaa
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