Xiphophorus hellerii (green swordtail): 116717413
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Entry
116717413 CDS
T07363
Symbol
pex5
Name
(RefSeq) peroxisomal biogenesis factor 5 isoform X1
KO
K13342
peroxin-5
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
116717413 (pex5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116717413 (pex5)
Membrane trafficking [BR:
xhe04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116717413 (pex5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_17
TPR_8
TPR_14
TPR_16
TPR_19
TPR_CcmH_CycH
CFAP70_mid_TPR
TPR_12
TPR_20
TPR_Slam
RMD1-3
CFAP70_TPR_C
ANAPC3
TPR_10
TPR_9
CABIN1_N
PEX18_PEX21_C
Motif
Other DBs
NCBI-GeneID:
116717413
NCBI-ProteinID:
XP_032414670
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Position
3:complement(12870345..12887507)
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AA seq
677 aa
AA seq
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MAMRELVEAECGGANPLMKLTGHMTKEEGAWRHRSTPTIAPTPIEIATEEELVNEFLQAP
PRPAHTFDMGQLLEEMQQIDQQSYRQAPQRAPDVAALALSGDWAAEFVSGSDSAATNALG
EAADADWTREFIAEAADPGRWAEEYLEQSEEKLWLGDLGDKETEWTKEYQAGDELRQTAN
ELVSKVDDPKLQNTEFLRFIRQIGEGSVTVESRTDKQLTDKVQAEEAQNWASNLNQFLAE
TGGGSLPLEPAETNQRIDKVKAKQAEQWAKVVRQVSEESAEAWVDEFTASGPDFQQAKAA
VESDVDFWEKLQQEWEEMAKRDAESHPWLSDYDQLLSSSYDKGYQFEEDNPCLSHPDPFS
EGLKRMEAGDIPGAVRFFESAVQKEPDNQLAWQYLGTCQAENEQEFAAISALRRCIELKK
DNLTALMALAVSFTNESLHRQACETLRDWLKHNPKYQSVWEQSEQDRQRDGGQEREKEKE
RFGSLLPESLFTDVQNLFLRAANSDPSQVDPQLQCGLGVLFNLSGEYDKAVDCFGAALSV
TPQDYLLWNKLGATLANGSRSEEAVAAYRRALELQPGFVRSRYNLGISCVNLGAHREAVE
HFLEALSLQRQAAGDGARAARGPGGAAATVMSDNIWSTLRMALSMMGESSLYAAADRRDL
DTLLAHFSQREVEGGSE
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcgggagctggtggaggcagaatgcgggggagccaatcccctcatgaagttg
accggtcacatgaccaaggaagaaggggcatggcggcaccgctcgacacccacaattgcc
cccactcctattgagattgcaacagaggaagagcttgtgaatgagttcctgcaggctccc
cctcgacccgcacacacatttgacatgggtcagctcttagaggaaatgcagcagattgac
cagcagagctacagacaagctccacagagagcaccagatgtggcagcgttggccctctca
ggcgactgggctgcagagttcgtctccggctcggactctgctgccacaaatgctcttggt
gaagcagcagatgctgattggacgagagaatttatcgctgaggctgcagatcccgggcgc
tgggcggaggagtatctggagcagtctgaggagaagctgtggctcggagaccttggggac
aaggagactgaatggacgaaggagtatcaagctggagacgagctgaggcagacagccaat
gagcttgtttctaaggtcgatgaccccaagttgcaaaatacagagttcctgcgattcatt
aggcagattggcgagggaagtgtgacagtggagagcagaacagacaaacagctcacagat
aaagttcaggccgaggaggctcagaactgggcctccaacctcaaccagttcctggcggag
acggggggagggagtcttcccttggaacctgcagagacgaatcaaaggattgacaaagtt
aaagctaaacaagcagagcagtgggccaaagtcgtcaggcaggtgtcagaggagtcggct
gaagcctgggtggacgagttcaccgcgtcgggaccagacttccagcaagccaaagctgca
gtggagagtgacgttgatttctgggagaagctgcagcaggagtgggaggagatggcaaag
agagatgcagaaagccatccctggttgtccgactacgaccagctgctcagctcttcttac
gacaaggggtatcaatttgaggaggacaacccctgcttgtcccacccagaccctttctca
gaaggactgaagaggatggaggcgggcgacatccctggagctgtgcgcttctttgaaagc
gccgtccagaaggaaccagacaaccagctggcttggcaatacctgggaacctgccaggca
gagaacgagcaggaatttgctgccatcagcgccctccgcagatgtatagagctgaaaaag
gacaacctgactgcgctgatggcgctggctgtcagtttcactaacgagtcgctgcacagg
caggcctgtgagacgttacgcgactggctgaagcacaatccaaaataccagtctgtgtgg
gagcagtccgagcaggaccgtcaaagagacggcggtcaggaaagagaaaaggagaaggag
cggttcggatcgttgttgccagaatcgttgttcaccgatgtccagaatctgttcctacgt
gcagccaactctgacccttcccaggtggacccccagctgcagtgcggtctgggagttttg
ttcaacctgagcggagagtacgacaaggcggtggactgcttcggtgctgccctttccgtt
actccacaggattatctgttgtggaacaagctgggcgccacgctggccaatgggagccgc
tcagaagaggcagtggccgcctacaggagagctctggaactgcagccaggttttgtccgc
agtcgctacaacttgggaatcagctgcgtaaacttgggggcgcacagagaggctgtggag
cacttcctggaagcgctgtctctccagcggcaggctgcaggagacggagcgagagctgcg
aggggacccggaggcgcagcagccacggtgatgtccgacaacatctggtccacgctacgg
atggctctcagcatgatgggagaaagctctttgtacgctgcggctgaccgcagagacttg
gacacgttgctggctcatttcagccagagagaagtggagggtggaagtgaatga
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integrated database retrieval system
