Xiphophorus hellerii (green swordtail): 116717472
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Entry
116717472 CDS
T07363
Symbol
sall3
Name
(RefSeq) sal-like protein 3 isoform X1
KO
K19871
sal-like protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116717472 (sall3)
03036 Chromosome and associated proteins [BR:
xhe03036
]
116717472 (sall3)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116717472 (sall3)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
116717472 (sall3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_6
TDBD
zf-C2H2_15
zf-C2H2_11
IZUMO
UBZ_FAAP20
NinF
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
116717472
NCBI-ProteinID:
XP_032414783
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All DBs
Position
3:26458320..26473768
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AA seq
1340 aa
AA seq
DB search
MCEFFIDYLFINSSFIPLLPSSLPSPLPAAPGDVLEDADSGNESRSGSEETHVCEKCCAE
FFKWSDFCEHLKSCTKNPLVLIVNDNEDTPNPSQEYPSEPSPIPSCNSEQDDSEDAREGN
QSPAGEGDDIPETDPLNEVGVLEKEDEQMELELSPDKNIDSEERDVTSPEPDGSLPQLSD
VVPSAITSYTMPSTNVTLETLHGTRVAVAQFSQSVRAAAAAAGSGVSTMAIPMILDQLMA
LQQQQIHQLQLIEQIRSQVALMNRQSAPQPALSHHHNSAVGNQGSVSSCVPPVANQLHLH
NFITPPVHQLPVRLPATLSAQGPSSLTSAIEGPLSQTPQSSTSQSNSSVPNTSSNNSAFP
PPSGSGLPALHPTCSSTISNNNSSTSSSKTGGGGGVSSTSALPRNSTTPPSLSHSSLLNS
ASSLPLIPHSSSSSVIFPNPLASIAATANALDPLSALMKHRKGKPPNVSVFDTKPSSEDP
FFKHKCRFCAKVFGSDSALQIHLRSHTGERPYKCNICGNRFSTKGNLKVHFQRHKEKYPH
IQMNPYPVPEYLDNVPTSSGIPYGMSLPPEKPVTTWLDSKPVLPTVPTSIGLQLPPTLSS
MIGGFTDSPSLTPLNRSPQRPSPPTSECASLSPNIANDSGMTTTSPSPKPSIGSDAPPLL
KPEGILLSPSCPIRPGDSTATTTTISQALLPTTVTSTTLSGSGQITEPISSSNSASNSVS
HPVLPMLSDQFKAKFPFGGLLDSMQTSETSKLQQLVENIDKKMTDPNQCVICHRVLSCQS
ALKMHYRIHTGERPFKCKICGRAFTTKGNLKTHFGVHRSKPPLRVQHSCPICQKKFTNAV
VLQQHIRMHMGGQIPNTPVPENLQEMDMDVSFDEKSLDAMSNYDDDLLDEMEQAMDDDMD
LKDGEVDPSKPYSPGSSPPTSIISSIAAMENQMKMIDSTANISRTFGLKTAQNGSSFPGE
TDCFTTDSLTAMGDAEGQSLGSPALSESSGSMQHLSPAHSHSESQRPKSPATLNNNNSSS
AMTAEEGQENNAAGLATVKSEKSETPSPHSVTEGTGALDLTATQPGRHFIKEESHFNMLF
LNRDRGLSTPNLASTATNMIKMEINGHGKSLSDSAHLPVGIQVPAAAPPTTMSPSINPML
APPPPRRTPKQHNCHSCGKNFSSASALQIHERTHTGEKPFACSICGRAFTTKGNLKVHMG
THMWNNAPARRGRRLSVENPMALLGGDAMKFSEMFQKDLAARAMNVDPGFWNQYAAAITN
GLAMKNNEISVIQNGGITQLPVRLGGTGITSLGAMPGGGMDRVHTGRSSPITGMEKSGLE
VPASRPFSRYMEENKEIGIN
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaattctttattgattatttattcattaattcttctttcatccccctcctccct
tcctctctaccctctcccctccctgcagccccaggtgatgtgctggaggatgccgacagc
gggaacgagagccgcagcggcagtgaagaaacccacgtgtgcgagaagtgttgtgccgag
ttcttcaagtggtcagacttctgtgaacatttaaagagctgtacaaagaacccgcttgtg
ctcatcgtgaacgacaatgaggacacgccgaacccttcccaggagtacccttcagagccc
tcacctatcccgagctgcaacagcgagcaagacgacagcgaggacgccagggaggggaac
cagagtcctgccggtgagggcgacgacatcccagagacggatcctttaaacgaggtcggt
gtcctggaaaaggaggatgagcagatggagctggagctttctcctgacaaaaatatagac
tccgaagagagagacgtgacatcacccgagccagatggctccctacctcagctaagcgat
gttgtcccctctgcaattacaagctacaccatgccaagcaccaatgttaccttggagacc
ctgcacggtactcgggttgcagttgcccagttttcgcagagtgtaagggcggcggcggcg
gcagcgggcagtggggtgtccactatggctatccctatgatcctggaccagcttatggct
ctccagcagcaacagattcatcagctgcagcttatagaacaaataagaagtcaagtagct
ctcatgaacagacagtctgccccacaacctgctctcagccaccatcacaacagtgctgtg
ggaaaccagggctctgtatcctcctgtgtccctcccgttgcaaaccaacttcatttacat
aacttcatcacaccccctgtccatcagctacctgtcaggttgcctgccactcttagtgct
caaggaccttcatctctcacctcagcaatagaagggcctctctctcaaacaccgcagagc
agtacttcacagtctaactcctcagttccaaacacatcgtctaacaactcagcgtttcca
ccaccaagtggttctggtttgccagccctacatcccacctgctcatccactatctcaaat
aacaacagtagcactagtagcagcaaaacaggaggtggcggtggcgtcagcagcacttcg
gctcttcccaggaactccaccacccctccctcgctaagtcacagcagcctcctgaactct
gcctccagtctaccactgatacctcacagttcctcgagcagcgtcatattccccaatcca
ctggctagcatagcagccacagccaatgcacttgatcccctttctgctctaatgaaacac
cgcaagggaaagccccccaatgtgtctgtgtttgacaccaagcccagctctgaagacccc
ttctttaagcataagtgtcggttctgtgccaaggtgtttggcagcgacagcgccctgcag
atccacctgcgctctcacactggagagaggccctacaaatgcaatatatgtggcaatcgt
ttctccaccaaggggaatcttaaagtccactttcagaggcacaaagaaaaatacccgcac
attcaaatgaacccttaccctgtaccagagtacctggacaatgtgcccacaagctccggt
attccatacggcatgtcgctgcctcccgaaaaacctgtaaccacctggctcgacagtaaa
ccggtcctccccactgtccccacatccattggcctccagctgcctccaacgctttccagt
atgattggaggttttacagattctcctagcctcactccacttaataggtcccctcagagg
ccttcaccgcccacaagtgagtgtgcatctttgtccccaaatattgccaatgattctggc
atgaccactacttcaccctccccgaaacctagcattgggagtgatgcacctccgctcctg
aaacctgaaggcattctcttgtcaccaagttgccctattaggccaggagacagcacagcc
accacaaccacaataagtcaagcgcttcttcccaccactgtcacctctacgacattgtca
ggtagtggccaaatcactgagcctatcagcagttccaactccgcttcaaattctgtctcc
catcccgtccttccaatgctttctgaccagtttaaggcaaagtttccctttggaggactc
ctagactctatgcaaacctcagagacgtcaaagttgcagcagcttgtcgagaacattgat
aagaagatgaccgatcccaaccagtgtgtcatctgccatcgtgttctaagctgtcagagt
gctctgaagatgcactaccgtatccacactggcgagaggcctttcaaatgcaagatatgt
ggacgtgcattcactactaagggaaatctaaagacgcactttggcgtgcacaggtcgaaa
ccaccacttcgagtccagcactcctgccctatatgtcagaaaaagttcaccaatgctgtt
gtgctgcaacaacacatccgcatgcacatgggagggcagattcccaacacccctgttcct
gaaaatctgcaggagatggacatggatgtgtccttcgatgaaaagagcctagacgcaatg
agtaactacgatgacgacctgctggatgaaatggagcaggctatggatgatgacatggac
ttaaaagacggagaagtagacccttctaagccctattcacctgggagctcacctccaact
tctatcatttctagcattgctgcaatggaaaaccagatgaagatgattgactctactgcc
aacataagtcgcacatttggcctgaagactgcacagaatggcagcagctttcctggggag
actgactgctttacaactgactccctgactgctatgggggatgctgaaggtcagagcttg
ggaagtcccgctttgtcagagtcctctggctctatgcagcatttgtccccagctcacagc
cattctgagagccagcggcccaagtccccagctacactcaataataacaacagcagcagt
gcaatgacagcagaggagggccaggagaacaatgcagctggcctggcaacagtgaagtca
gaaaaatctgagaccccgtctccccattctgttactgaagggaccggggcccttgacctg
actgccactcaacctggcaggcacttcatcaaggaggagagccacttcaacatgctgttt
ctaaacagagatcgaggactaagtactcctaatttagccagtacggcaacaaacatgatc
aagatggaaattaacggacatggcaagtccctgagcgacagcgctcacctgcccgtgggc
attcaggttccagccgcagcacccccgaccaccatgagccccagcatcaaccctatgctg
gcaccgccgcctccacgtcgcactcctaagcagcacaactgccattcgtgtgggaagaat
ttttcctcggccagcgcgcttcaaatccacgagcgcacacacacgggagagaaacctttc
gcctgctccatttgtggaagggccttcaccacaaagggcaatctgaaggttcacatggga
acacatatgtggaacaacgcccccgctcgtcggggccgacgcctgtcggtggagaacccc
atggccctcctgggcggcgacgccatgaagttcagcgagatgtttcagaaggatctggcg
gcccgggccatgaacgtcgacccgggcttctggaaccagtacgccgccgccatcaccaac
ggcctggccatgaagaacaatgagatttctgtgattcagaacggaggcatcacccagcta
cccgtcagactcggcgggacgggaatcacttccttgggagccatgcctggaggaggcatg
gaccgtgttcacactggcagaagctcccccatcacgggtatggagaagtctggtctggag
gttccagccagtcgacccttttccagatatatggaggagaacaaagagattgggatcaac
tga
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