Xiphophorus hellerii (green swordtail): 116717524
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Entry
116717524 CDS
T07363
Symbol
grik3
Name
(RefSeq) glutamate receptor ionotropic, kainate 3
KO
K05203
glutamate receptor, ionotropic kainate 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04080
Neuroactive ligand-receptor interaction
xhe04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116717524 (grik3)
04082 Neuroactive ligand signaling
116717524 (grik3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116717524 (grik3)
Ion channels [BR:
xhe04040
]
Ligand-gated channels
Glutamate (ionotropic)
116717524 (grik3)
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Gene cluster
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Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
116717524
NCBI-ProteinID:
XP_032414868
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Position
3:8719750..8839913
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AA seq
975 aa
AA seq
DB search
MRNTWLSPRSAIWEYWTSLIAFLFWIQYSYGMPHVIRIGGIFEQTDGPVSLVSAEELAFK
FAVNNINRNRTLLPNTTLTYDIQRINIYDSFEASRKACDQLSLGVVAIFGPSHSSSSNAV
QSICNALEVPHIQVRWKHHPMDNRDTFYANLYPDYSSLSYAILDLVQYLKWKTATVVYDD
STGLIRLQELIMAPSRYNIRLKIRQLPLDTEDTRPLLKEMKRSREFRIIFDCSHHMAAQI
LKQAQTMGMMTEYYHYIFTTLDLMAIDLEPYRFCGVNMTGFRILNVENPQVASIVEKWSM
ERQIPPKPDSGLLEGIMTTDAALTYDAVHIVSVSYQHAPQMTVNSLQCHRHKPWRFGGRF
MSFIKESHWDGLTGRLSFNKTTGLRTDFDLDIVSLKEDGLEKVGKWSASGGLNITEVPKR
KGMNITDSLSNRSLVITTILEEPYVMLKKSDKALVGNDRFEGFCIDLLKELAKILGFTYE
IRLVPDGKYGSLDDKGQWNGMIRELIEHRADLAVAPLTITYVREKVIDFSKPFMSMGISI
LYRRPNATNNGFFSFLNPMTPDIWVYILLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSD
VVENNFTLLNSFWFGVGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLT
VERMDSPVDSADDIAKQTKIEYGVVRDGATMAFFKKSKVSTFEKMWAFMSSRPRTSLVKS
VEDGVQRVLKSDYALITESTTIDYITRRNCNLTQVGGLIDSKGYGIGTPLGSPYRDKISI
AILSILEDGLLHVLKEKWWSGSSCLDEERRETGPMGIQNLGGIFIVLASGLVLSVFVAIA
EFIYKLRKTAEREQVFVQRHGGRDQTVVHLRETGETQASAPSHGEDGCSDQHARLQRPTT
PRKGQHELQHWDDSCVPLTMCSLQGKNLVSNISGAVPEPRDNGIDGITRYIINNSDMGTL
TKHGQLKLAASATQV
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaatacttggctgtctccccggagtgcgatttgggaatattggacttcgctgatt
gcattcctcttttggattcagtactcttacggaatgcctcacgttatacgaattggtggg
attttcgaacaaacagacggacctgtttcacttgttagtgcagaagaacttgcctttaaa
tttgctgtgaataatataaacagaaacaggactttgttgccaaacacaacactaacatac
gacatacagaggattaatatctacgacagctttgaggcatcaagaaaagcttgtgaccag
ctgtcgttaggtgtggttgcaatatttggaccttcacatagctcatcttcaaatgctgtg
cagtccatctgcaatgcactggaagtgccacacatccaggtgcggtggaaacatcaccca
atggacaacagggacactttttatgccaatttatacccagattattcatcattaagttat
gccattctggacctcgtgcagtatcttaaatggaaaacagccactgttgtatatgacgac
agcacaggtctaataaggttacaggagctgataatggccccatcaaggtataacattcga
ttaaagatccgccagcttcctctagatacagaggatacaaggcctcttcttaaggaaatg
aagagaagtcgggagttccgcatcatctttgactgcagtcaccacatggctgcacaaatt
ctcaaacaggcccagaccatggggatgatgacagagtattaccactatatcttcaccact
ctggacttgatggctattgatcttgagccatatcgcttttgtggtgtcaacatgactggc
tttcgcatcctcaatgtggaaaatccccaggttgcatctattgtggagaaatggtcaatg
gaaaggcaaattccacctaagccagattcaggcctgctggaaggcatcatgacgacagat
gcggctctgacctatgatgctgtccacattgtgtccgtctcatatcagcacgctccacag
atgactgtgaactcactgcagtgccaccgacataaaccctggagattcggaggccgcttc
atgagtttcatcaaagagtctcactgggatggtttgactggaagattgtccttcaacaag
acaactgggttacgtacagactttgacttggacatcgtcagtctaaaggaggatggactt
gaaaaggtggggaagtggagtgcgtcaggaggtcttaacatcacggaagtgccgaagcga
aaagggatgaacatcactgattctctgtctaaccgttctcttgtcatcacaaccattctg
gaggagccatatgtcatgcttaagaagtctgacaaggcactggttgggaacgaccgtttt
gaaggattctgcatcgacttgctgaaagagcttgctaaaatcctgggcttcacgtatgag
atccgcctggtgcctgatggaaaatacggctcactggatgacaagggacagtggaatggc
atgattagggaacttatagaacatagagcagacttggcagtggcccctctcaccattacc
tatgtgcgtgaaaaagtcattgacttctcaaaacccttcatgagtatgggcatcagcatc
ctgtatcgcagacccaatgccacaaacaacggcttcttctccttcctaaaccccatgact
ccagacatctgggtgtacattctgctggcgtacctgggtgttagctgtgttctttttgtc
attgcaaggtttagcccgtatgaatggtacgacgctcatccctgtaatcctgggtcggac
gtggtggagaacaacttcacgctcctcaacagcttctggtttggagttggttccttaatg
caacaaggctcggaactgatgcccaaagccctgtcgaccaggataataggtggaatctgg
tggttcttcactctcatcataatatcgtcatatacagctaatttagcagcttttcttacc
gtggagaggatggactcaccggtggattcagctgatgacattgccaagcagacgaagatc
gagtatggtgtggtcagagatggagcaacaatggctttcttcaagaaatcaaaggtttct
acatttgaaaagatgtgggccttcatgagcagcaggccgagaacgtctctggtgaagtct
gtggaagatggggtccagagggtgctgaagtctgactatgcactcattacagagtccacc
accattgattatatcactaggagaaactgtaacctaacacaagtgggagggcttattgac
agcaaaggctacggcatcggcactcccctcggctcaccatacagggacaaaatcagcata
gcaatcctcagcatcttagaggatgggcttcttcacgttctgaaggagaagtggtggagc
ggaagcagctgcttggatgaggagcgtcgtgagacaggccccatggggatccagaacctg
ggtggtatattcattgtgctggcatctggtctggtgctgtctgtctttgtggcaattgct
gaatttatctacaagctgagaaagaccgctgaacgtgaacaggtctttgtgcagcgccat
ggtggacgagatcagactgtcgttcacctgcgagagacgggtgaaacacaagcctcagcc
cccagtcatggtgaagacggatgcagtgatcaacatgcacgcctacaacgaccgacgact
cccaggaaaggacaacatgagctgcagcactgggatgactcctgtgttcccctgacaatg
tgttccctgcagggcaagaacctcgtgagcaacatttcaggggcagtgccggagcccagg
gacaatggcatagacggaatcaccagatacatcattaacaacagtgacatgggaacactt
acaaaacatgggcaactcaaattggcagcatcagccacacaggtatga
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