KEGG   Xiphophorus hellerii (green swordtail): 116717690
Entry
116717690         CDS       T07363                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    116717690 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xhe03400]
    116717690 (xrcc1)
DNA repair and recombination proteins [BR:xhe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     116717690 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 116717690
NCBI-ProteinID: XP_032415124
LinkDB
Position
3:10918255..10941390
AA seq 627 aa
MPEIQLKHVISCSTEDNTHKADNLLSSDTYRKWKAAKPGEKQTSVILQFEKEEQVHSIDI
GNEGSAFIEVLVGNSSAVKDQDYEVLLVTSSFMSPTESRNGTNMNRVRFFGPNQLQKSTA
QEKWDRVKIVCSQPYSKNIAYGLAFVKFHSPPDKTDPPTSSPKLTKLGQFRVKDESPSSG
PSLQPGSLFFNRDNATKPSTSLKVSPQSDKLSYAAAALQAGGSSQSPGQASTSISASPQP
PAKRKFEFSKERQSPSGPPPAKKMSPGGSPETKAATPKYKPSPISTPSPSTAKASSAKKS
AEKKQESQSKPEPKSKPKTKSTSQQQVPFNRILEGVVFVLSGFQNPFRGELREKALEMGA
KYRPDWTPDSTHLICAFANTPKYSQVKSAGGIIVRKEWVMDCHKRKQKISHKRYLMDGAE
SSSESETDGDDQSEEEIETKIPQKQAKQVTPIKTPEKKDEDDEYGGSTDEDEPAGEDEGD
DESGVDTEDELQRVESKQKKAAAKESPVKEEDPYGGSTDENTDAEAEEDHPIPELPDFLH
GKHFFLYGKFPNNERRLLLRYIVAFNGVIEEYMSDKVQFVVTSGGWHESFEDALMENCNL
NFVKPAWIYAINERQKMLPYQPYTVVP
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgccagaaattcaactcaagcatgtaatttcttgctccaccgaggacaacactcataaa
gcagacaatctgctgagctcagacacatacagaaagtggaaagcagcaaaacccggtgag
aagcagacgtccgtcatcctccagtttgaaaaagaggagcaggtccatagtattgatatt
gggaatgaaggatcagctttcatcgaggtgttggttgggaattcttcagctgtcaaagac
caggactatgaggttcttctcgtcacatcctccttcatgtcccctactgagagccgtaat
ggcaccaacatgaaccgggttcgtttcttcggacccaaccaattgcagaagagcaccgct
caggagaagtgggacagggtgaaaattgtgtgcagccagccgtacagcaagaacattgca
tatggccttgcttttgtcaagttccactcaccacctgataaaaccgatcctccgacctcc
tcccctaaactgacgaagctgggacagttcagggtgaaagatgagtctccttcatctggg
cccagccttcaacctggcagcctcttcttcaaccgagacaatgcaacaaagccaagcact
tcactcaaagtctctccacagagtgacaagctgagctatgctgctgctgctctgcaggca
ggaggtagctctcaatcaccaggtcaagcttccacctccatctctgcctcaccacagcca
ccagcaaaaaggaagtttgagttcagcaaagagcgacagtctccctctggacctccccca
gcaaagaaaatgagtcctgggggctcgcctgagaccaaagctgcgacccctaaatacaaa
ccgagtcctatcagcacgccaagcccaagcactgccaaagcatcatcagcaaagaaatct
gctgagaagaagcaggagagccaatccaaaccagaacctaaatccaaaccgaagacaaaa
tctacgagccagcagcaggttccgtttaaccggatcttggagggagttgtgtttgtgctg
agcggcttccagaatcccttcagaggggagctgagagaaaaagcgcttgaaatgggagcc
aagtaccggcctgactggacacctgactccacacatcttatctgtgccttcgccaacact
cccaagtatagccaggtgaaatcagcaggcggcatcattgtccggaaagaatgggtgatg
gactgccataagaggaaacagaagatctcacataaacgctacttgatggatggggcggag
tccagctccgagagcgaaacggacggtgacgaccagagtgaggaggaaatcgaaactaag
attccacagaagcaggcgaaacaagtcactccgataaagacaccagaaaaaaaggatgag
gatgatgaatatggaggctcaactgacgaggatgaaccagcaggagaagatgaaggtgat
gatgaatcaggagtagatacagaagacgagctgcagagggtggagagcaaacagaagaaa
gctgctgcaaaagaatcaccagtaaaagaagaggacccatatggggggtcaacggatgaa
aacacagatgctgaagcagaagaggatcatcccatccctgagctgccagattttcttcac
ggaaagcactttttcctttatggaaaattcccaaacaacgagaggcgactacttttacgg
tacatcgttgcctttaacggagtgatcgaggagtacatgtcagataaagtgcagtttgtc
gtgacgagtggcggatggcacgagtcctttgaggatgcgctgatggagaattgcaacctg
aactttgtgaagcctgcatggatttatgcgatcaatgaacgtcagaaaatgctgccctac
caaccgtacactgttgtgccctga

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