Xiphophorus hellerii (green swordtail): 116717707
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Entry
116717707 CDS
T07363
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
KO
K03145
transcription elongation factor S-II
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xhe03021
]
116717707
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
116717707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
EAD11
Motif
Other DBs
NCBI-GeneID:
116717707
NCBI-ProteinID:
XP_032415148
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Position
3:complement(20476775..20487520)
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AA seq
714 aa
AA seq
DB search
MTREEDLIRIAKKLDKMVSRNNTDGAIDLLKELKSFNMTLKLLQETRIGMSVNNIRKHCR
DEEVIALAKVLIKEWKRLLDSGNSHSEKVDELKNGLDARKPAAATNSCSSEPQSSHRRLE
AKLKHESDSDKNRDEKQNDNHINKKSHADDPGTDGKHLEGHQSEKHLQEIRAEKRTPAEN
PKPETDHKNQRHAPDLQSGKHKSDPIKHRSLEDLKKMRNAELLKKEKPPEEPKKYTDDGK
QDKSRAEGRHEWPVGTPQRGKPAEAHKLVFERRGVLDSSVLYPTRFPSPPRPARPLLPIK
RPSLDSKKDRKDGKESSSRHPHSQPASPPQKRPAAEVKKERKVPPDPNAPIAPLPFHLHP
PPPRKEPPDPNAPLPPLPLHLHPPAAPPKRTSVDGGKDRESSRKPSSDSKPLPQKKSADC
VKKDRKDSDDGKASKKLSDDTKRERKDSSDSKPPSTKKPTIEVKKEKHRKDSSELKPSQP
AKGHSTDSKSVRRESLGSKPLGQPQRKPSTDSLERKGKTEAPRTPTTPTSPLSPSFSSPG
GPLSPHLATGDSVRDKCIEMLTAALRTDNDYKDFGANCDGMAAEIEDHIYQEIRATDMKY
KNRVRSRISNLKDPKNPGLRRNVLAGSIELSRIASMSAEEMASDELKQLRNVLTQEAIRE
HQMAKTGGTTTDLLQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgactcgagaggaggacctgatccggatcgccaaaaagctagacaagatggtgtctaga
aataacacggacggagccatcgatctgctgaaggagttgaaaagcttcaatatgacactg
aagcttctccaggaaacaagaattggcatgtctgtgaacaacatcaggaagcactgcaga
gacgaagaagtcatcgctttggcaaaagtcctcattaaagaatggaagagacttctggac
tctggaaattctcactctgagaaagttgatgaactgaagaacggtttggatgccaggaaa
cctgcagcagctacaaacagctgctcctcagagccacagagcagtcacaggaggctggag
gccaaactgaaacatgaatccgattctgacaaaaacagggatgaaaaacagaacgataac
cacataaataaaaagagccatgcggacgatcccgggacggatggaaaacaccttgaaggg
caccaaagtgagaaacaccttcaagaaatcagagcagagaaacgaacccctgcagagaat
cccaaaccggaaacggatcataagaatcagaggcacgcaccagacctgcagagtggaaaa
cacaagtcggacccaatcaagcacagatcgctggaggatttgaagaagatgagaaacgct
gagctactaaagaaagagaaacctcccgaggagcctaagaaatacacagatgatgggaag
caggataaaagcagagcggaaggcagacacgagtggcctgtcggcacacctcagagaggg
aagcctgctgaagctcataagctagtctttgaaaggagaggagtgctggacagcagcgta
ctgtatcccacccgcttcccctccccccctcgacccgctcggcctcttctacccatcaaa
cgtccatctctggactcgaaaaaagacaggaaggacggtaaagagtcttcctctcgacac
cctcactctcaaccggcctctccgccgcaaaagcgacctgcagcggaagtcaagaaagag
aggaaagttccaccggacccaaatgctccgatagctcctcttcctttccacctccatcct
cctccaccgagaaaagagcctcctgatcccaacgcgcccctccctccgctcccactccat
ctccacccccccgctgctcctccgaagcgcacctctgtggatgggggcaaggacagagag
agcagcaggaagccatcctcagactcaaagcctctgccgcagaaaaagtctgcagattgc
gtaaagaaagacaggaaagattcagatgatggcaaagcatctaagaaactgtcagatgac
accaagagagaaaggaaggattcttctgactctaaaccaccctctaccaaaaagcccacc
attgaggtcaaaaaagaaaagcacaggaaggattccagtgaactgaagccaagccaacct
gcaaaaggccattccactgactccaaatccgtcaggagagagtctttaggctcgaagcct
cttggacaaccacagaggaaaccgtctactgacagcctggaaagaaagggtaaaaccgaa
gcacccagaactcccaccaccccgaccagtcctctgtcacccagcttcagctctcctggg
ggtcctctgtcccctcacctggctactggagactccgtcagagacaagtgcattgagatg
cttacagctgccctgcggacagacaatgactacaaagattttggagcaaactgtgacggt
atggcagcagagattgaggatcatatctaccaggagatcagggccacagatatgaagtac
aagaaccgagtccggagccgcatcagcaacctgaaggaccccaagaacccgggactccgc
agaaacgtcctggccggcagcatcgagttgagccgcatcgccagcatgtctgctgaggaa
atggccagtgatgagctgaaacagctgaggaacgtcctaacccaggaggccatcagggag
caccagatggccaaaaccggtgggaccaccacagacctgctgcagtgcggcaaatgcaag
aagaagaactgcacctacaaccaggtgcagacccgcagtgctgatgagccgatgaccaca
tttgtcctctgcaatgaatgtggcaaccgctggaagttctgctga
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