Xiphophorus hellerii (green swordtail): 116717713
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Entry
116717713 CDS
T07363
Symbol
limd1
Name
(RefSeq) LIM domain-containing protein 1
KO
K16682
LIM domain-containing protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116717713 (limd1)
03036 Chromosome and associated proteins [BR:
xhe03036
]
116717713 (limd1)
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
116717713 (limd1)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
116717713 (limd1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
116717713
NCBI-ProteinID:
XP_032415159
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All DBs
Position
3:20713028..20733022
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AA seq
570 aa
AA seq
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MEKYEDLGLEASKFIEDLNMYEASRDGLFRMRRDAGNNPDFEETRRVFASKMTKIHMQKQ
QEEMAKSNQVIKMNGGHHGGAHYTKDRPPINSYRQPGEAAAKPPILSGPVPSAAPVNQCV
QAEAPASRAYGYGSNYDNNERLEPHSSHHNNSSMPSCGSPAASSLYSVSPSREGKLPPTL
SGSSTSHHQPQRLHTSFTVSPSQATNQSPLCSAGTARAWTGEPTGAPTSEGIPAFPLTAF
TGDADYHVQQPVSHYLQSVNHNGPAATSFVPEMPQLKAQVTSAAPCASKNQLPARSQMSG
GGQVMQVVGDGPGGPSSPKPIQIPSTSQPVQLLEQGPSAAEIKLEALTKQLEKEMDAQPR
SDYFGLCVKCNKAVYGANQACQAMGSLYHDTCFTCSACSRRLRGKAFYYVGGKVFCEEDF
LYSGFQQSADKCNACGHLIMDMILQALGKSYHPGCFRCVICNESLDGVPFTVDTENKIYC
VKDYHRVLAPKCAACNQPILPSEGSDETIRVVSMDKDYHVECYHCEDCKMELNDEEGHRC
YPLNGHLLCHSCHLKHIKPGCPPAVPASTY
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatacgaggatttgggactcgaagcgagtaagtttatcgaagacttaaacatg
tatgaagcatccagagatggcttgtttcgaatgaggagggatgcgggaaataacccggac
tttgaagaaactaggagggtttttgcctccaaaatgaccaaaatacacatgcagaaacag
caggaggagatggccaaaagcaaccaggtgattaaaatgaacggaggtcaccacggcggc
gctcattacaccaaggacagaccgcccatcaacagctacaggcagccgggggaagcggcg
gcgaagcccccgatcctttcgggcccggtgccgagcgccgcgccggtgaaccagtgtgtt
caggctgaagctccagccagcagggcgtacggctacggaagcaattatgataacaacgag
cgcttagagccacattcctcccatcacaataactcttccatgccaagttgtggaagtcca
gctgccagttctctgtactctgtctccccatccagagagggcaagctgccccccactctc
tcagggagcagtacatcccaccatcagcctcagcgcctgcacacatccttcaccgtcagt
ccttcacaagcaaccaatcagagtccactgtgctctgccgggacagccagggcttggact
ggagagcccactggtgctccaacatcagagggcatccctgcctttcctttgaccgccttc
acaggtgatgctgactatcatgtgcagcagcctgtgagtcattacttacaatctgttaac
cacaatgggcctgcagccacttcctttgtcccagaaatgcctcaacttaaagcccaggtg
acctctgcagccccatgtgcctctaagaaccagcttccagctcggagccaaatgtctggt
ggcggacaggtcatgcaggtcgtcggtgatggtcctggaggcccgtcctcccctaaacct
atccagataccttctacctctcagcctgtgcagctgctggagcaggggccctctgcagct
gaaatcaaactagaggcacttacgaaacaactggaaaaagagatggatgcccagccaaga
tcagactactttgggctttgcgtgaagtgtaacaaggcggtttacggagctaaccaggcc
tgccaggctatgggtagcctctaccacgacacctgcttcacctgcagtgcctgcagtcga
aggctaagagggaaggctttctactatgttggagggaaggttttctgtgaagaggacttc
ctgtactctggtttccagcagtctgctgataagtgtaacgcatgtggacatctgatcatg
gacatgatcctgcaggctctggggaagtcgtaccaccccggctgtttccgctgtgtgatc
tgcaacgagagcctcgatggagtgcccttcactgtggacacagaaaacaagatctactgt
gtcaaggactaccacagggtcctagctcctaaatgtgcagcctgtaaccagccaatcctg
ccctcagagggctctgatgaaaccatccgagtcgtatccatggacaaagactaccacgta
gaatgctaccactgtgaggactgcaagatggagctgaatgatgaagagggtcaccgctgc
taccccctgaacggccacctcctctgccactcctgccacctgaagcacatcaagcccggc
tgtccgcctgcagtccctgcctccacatactga
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