Xiphophorus hellerii (green swordtail): 116717788
Help
Entry
116717788 CDS
T07363
Symbol
scap
Name
(RefSeq) sterol regulatory element-binding protein cleavage-activating protein isoform X1
KO
K26682
sterol regulatory element-binding protein cleavage-activating protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116717788 (scap)
Membrane trafficking [BR:
xhe04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
116717788 (scap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_SCAP
SCAP_N
Sterol-sensing
WD40_Prp19
Patched
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
116717788
NCBI-ProteinID:
XP_032415290
LinkDB
All DBs
Position
3:complement(5293449..5324446)
Genome browser
AA seq
1349 aa
AA seq
DB search
MFPSLPGGRAKPSETLLDSRRHRYVNHNAQIRLKNPSAAAFKGRKQVGPRQINRSPISRC
LDAPRRTVLGRPVLPNGRELTTSTRMTLREQLREKISAAFYRHGLLCASYPVPIILFTSA
SILTCCYPLLRLPLPGTGPVEFTTGVQDYSVPPHEPLGDLERPDWYHGPPVAYIQQVLVK
AAVSPWDGSLVPVDVFRSPLGKVFSLLEEIRNHVHSDGSGIRSLEALCLQVTDLFPGLRR
MQSVLPEHGCLLVSPGNYWQNQRDLFDSDSDLLKTIQKHEPKGLHTSATLRDLLFGVPGK
YTGVSHYNRKRVVTYTITVVLSNYDAGFLSSLRTRLKQLHPSANCSLRDDHMVHIHFKEE
IGIAELIPLVTTYIILFAYIYFSTRKIDMVKSKWGLALAAVVTVLSSLLMSVGLCTLFGL
TPTLNGGEIFPYLVVVIGLENVLVLTKSVVSTPVDLEVKLRIAQGLSNESWSIMKNMATE
LCIILIGYFTLVPAIQEFCLFAVVGLVSDFFLQMFFFTTVLSIDIRRMELADLNRRLPAE
AGLPPSKPGPLRTREAPPPPRPSPHTITLQTPAFRNLRLPKRLRVVYFLARTRLAQRIIM
AGTVIWIGILVYTDPAGIRTYLAAQVSEQSPLGDSGGGGLSPHLAVAPVFRGGDPTSTLS
IHRAPAPTPLPENQSQGHLGPAGPLPHAPPSVPQITWGAEDEEGWRRLSFRHWPSLFSYY
NITLAKKYISLLPVIPVTIHLSPQEAIDTRHPQDTRHPPPPIPKVSADIQTDLTLYKVAA
LGLAAGVLLVLLLFCLYRVLCPRNYGRNGVAHGRRRRGDLPCDDYGYSPPVSEISPLLLR
GHSMDIECLASDGMLLASCCLAGQIRVWDAQTGDCLTVIPKQRLRRCSSSGCWEQRDVWD
TITAESDCACESRDPNLGCDGVSEDDCYPLRRRTAPTRPPLFTDQPDLTPLIDTNFTSQP
PSNLATPPRGGFDFGGLVERAYMEHEPPSPSTYPSPSSASSSPPSATYLQRTLSLGDASG
PPNQAVGAGTQSAGDWESSVWAMELRGNLIAAGRSSGKLELWDAVEGSLRCSNEDGVSGI
TALAFLNNRIVAARLNGSLDFFTVEINKPLGLLQYRGAPGRGSMPPSPCYSSEDLISCQL
TRSVQCAHQKPITVLRAAAGRVVTGSQDHTVRVYRLEDSCCLFTLQGHSGGITAIYIDQT
MVLASGGQDGAICLWDVLTGSRVSHVYGHRGDVTSLVCTTSCVISSGLDDLICIWDRSTG
IKLYSIQQEVGCGASLGVISESLLVTGGQGCVSFWDLNFGDLLQTVYLSQSGDGQGVRQL
LVLDNAAIVCDFGSELSLVYVPSVLEKLD
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgtttccgtcgctcccggggggaagagccaagccgtcagagactttgcttgactcgaga
aggcaccgctatgtcaaccacaacgcacagattaggctaaaaaatcccagcgctgccgct
ttcaagggccgtaaacaggtgggaccccgacagataaaccgctctcccatcagcaggtgt
ctggatgctccgcggcgcaccgtcctcggccgccctgtgcttcccaatggccgggagttg
accacaagcacgaggatgacgctgcgcgagcagctgagagagaagatctcggcggccttt
taccgccacgggctgctgtgtgcctcctacccagtacccatcatccttttcacctccgcc
agcatcctcacctgctgctatccgttgctgaggcttcctctgcctggcacgggtcctgtg
gagttcaccactggggtgcaagactacagcgtccctccccatgagcctctgggagacctg
gaacgaccagactggtaccacgggcctccggtcgcctacatccagcaggtgttggtgaag
gcagccgtgtctccgtgggacggcagcctcgtgccggtggacgtgtttcggtcgcctctg
gggaaagtcttcagtctgctggaagagattcgcaaccacgtccactccgatggctctggc
attcgaagcctggaagcgctgtgtctccaggtgacagacttgtttccagggttacggcgg
atgcagtcagtgctgccagaacacggctgcctcctcgtgtctcctggcaactactggcag
aaccagcgggacctgtttgactcggactcggacctcctcaagactattcagaaacacgaa
ccgaaaggactgcacacctcagcgacactgcgagacctgctgtttggcgtccctggaaag
tacacaggagtcagtcattacaacaggaagagagtggtcacatacacaatcactgtggtt
ctttctaactatgatgcaggctttctgagtagcttacggacccgtctgaaacagcttcac
ccgtcggccaactgcagcctgagagacgaccacatggttcacatccacttcaaggaggag
atcggcatcgctgaactaattcccctcgtcaccacatacatcatccttttcgcctatatc
tacttctccacccgtaagatcgacatggtgaagtctaagtggggcctggccctggctgct
gtggtgacagtcctcagctccctgctcatgtctgtgggcctgtgtactctgtttggcctg
acgcccacgctgaacggaggtgagatcttcccttaccttgttgtcgtgatcggcctggaa
aatgtgttggtgctcaccaagtctgtggtttccacccccgttgaccttgaggttaaactt
cgaattgctcagggccttagtaatgagagctggtctatcatgaagaacatggccactgag
ctgtgcatcatcctgattggatatttcactttggtgccagctatccaggagttttgtctt
ttcgctgtcgtggggctcgtttctgacttttttctgcagatgtttttcttcacaacagtc
ctgtctatagatattcgccgtatggagctggctgacctgaaccgccggcttcccgccgaa
gccggcctgcctccatcaaaaccgggacccctgcgaacacgtgaggcccctcctccgcct
cggccctcccctcacacaatcactctgcagaccccggccttcaggaacctgaggctccct
aaaagactgcgtgttgtgtacttcctggcccgcacacgcctggcccagcgcatcatcatg
gctggtacggtaatctggatcggcatcctcgtctacacggacccggctggaatccgcacc
tacctggccgcgcaggtgtccgagcagagccccctgggggactccggcggaggcggttta
agcccccatctggcagtggcaccggttttccgtggcggggatcctaccagcaccctgagc
atccaccgtgctccggctccaactcccctacctgaaaaccaatcacaaggtcaccttggc
ccagcaggacctcttccccatgccccgccctccgtgccccagatcacctggggggccgaa
gatgaggaaggatggaggagattgtcttttagacattggccgtcgcttttcagctactac
aatataactttagcaaagaaatatatcagccttctcccggtaattcccgtcacgattcac
ttgagcccccaggaggccattgacacgcgtcaccctcaggacacgagacaccctcctcca
ccaatccctaaagtttctgcagatatacagacagacctcaccctctacaaggtggctgct
ttgggcctggctgcaggggtcctgctggttcttctgctcttctgcctctaccgcgttctc
tgcccccgtaactatggccgaaacggtgttgctcacgggcgtcggcgacgaggcgacctg
ccctgcgacgattacggttattctccacctgtcagtgagatctctcctctgctgctgagg
ggacacagtatggacattgagtgtttggctagcgatgggatgttgctggccagctgttgc
ttggcgggacagatccgtgtttgggatgcccagactggtgactgcctgacggtgatccca
aagcaacgattaagacgatgcagcagcagtggctgttgggagcagcgagacgtctgggac
acgataactgcagagtccgactgtgcctgtgaatctagagacccgaatctcggctgtgac
ggggtatcggaagacgactgctacccgctgagacgtcgcaccgctccgacccggccgcct
ctcttcaccgaccagcccgacctgactccgctcatcgacaccaactttacctcccagcct
ccctccaacctcgccacgccacccagaggagggttcgacttcggaggcctggtggagcgc
gcctacatggagcatgagcctccgtcgccgtctacgtacccgtctccttcctccgcctcc
tcctcgcctccttcagccacatatctccagaggaccctgagcctgggggacgcatccggg
cccccaaatcaggctgtcggggctgggacgcagtccgctggagactgggaaagctctgtc
tgggccatggagctgagagggaatctgatcgctgctgggaggagcagcggcaaactggag
ctgtgggatgcagtggaggggtctctgcggtgcagtaatgaagatggagtctctggtatc
actgcgctggcgtttcttaacaacagaatcgtggcagcgcgactgaacgggtcgttagat
ttcttcactgttgagattaacaaacctctgggtttgctgcagtacagaggtgcccccggg
cgaggcagcatgcccccgtctccctgttacagcagcgaggacctgatcagctgtcagctc
actcgctctgtgcagtgtgcccaccagaagccgatcactgtgctgcgagcggcagcaggc
agggtggtcaccggcagtcaagaccacacagtcagggtttatcgtctggaggactcctgc
tgcctttttaccctgcagggtcactctggggggatcacagccatctacattgaccagacg
atggttctagcgagcggtgggcaggacggcgccatctgtctgtgggatgtcctgacagga
agccgtgtcagtcatgtctacggtcaccgtggcgacgtcacctcccttgtctgcactacc
tcttgtgtcatcagctcaggactggatgacctcatctgtatctgggaccgcagcactggc
atcaaactgtactccatacagcaggaggttggctgtggggccagtcttggcgtgatctca
gagtctctgctggtgacggggggccagggctgcgtttccttctgggacctgaacttcggc
gacttgctgcagaccgtctacctgagccagagcggcgacggtcagggcgtccggcagctg
ctggtgctggacaacgccgccatcgtctgcgacttcggcagcgagctcagcctggtctac
gttccctcagtgctggagaaactggactga
DBGET
integrated database retrieval system
