Xiphophorus hellerii (green swordtail): 116717811
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Entry
116717811 CDS
T07363
Symbol
nhlrc1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116717811 (nhlrc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116717811 (nhlrc1)
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116717811 (nhlrc1)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116717811 (nhlrc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
DUF5711
RING_XB3-XBAT31
DUF6798
Motif
Other DBs
NCBI-GeneID:
116717811
NCBI-ProteinID:
XP_032415325
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All DBs
Position
3:17866129..17868353
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AA seq
399 aa
AA seq
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MDQTSDLPHRCCLSPEATLREIQLNLLECKVCFEMFNSQQRERRPQNLSCGHVLCLECIT
ALSHPLLRKLECPFCRQLCSVDSTSHCQVLSDLQELLLSQKSSSSAPPHRSKGGFISETA
LHLFAAFGGWGTLINPTGIAVLGSVGGIVVVHDGEKRVVVFNQQGRKLHSFGEKGTGNGD
ICYPVDVAVSPTGYVIVTDAGDKSVKVFTSRGIHVVTVKDCFQLPWGVDTDCCGRILVSD
LQAGNLLRLKVNFSDGIILESENVLANLCCPKAVAHCQKNGNTAVLEHPRGRHHNRNLKV
FTKDFHLLYQMDSFSLILQTSFRFNISDVAFSSDGDVVVSDCDQGLICSLGNLQNHPVLT
PLVGVHLIRPAGLVILNNTLITVDGGDHTVKIYSSKPGA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggaccagacctctgatctcccacatcgttgctgcctgagtccagaggcgaccctgagg
gaaatccagctcaacttactggagtgtaaagtctgctttgagatgtttaactctcaacag
agggagcgcagaccacagaacctttcctgtggtcatgtactctgtctggaatgcatcaca
gctttgtcccaccctctcctgaggaagctggagtgcccgttctgtcgacagctgtgcagt
gttgacagcacctcccattgccaggttctcagtgacctgcaggagctccttttgtcccag
aaatcctcgtcctccgctccccctcacaggtccaaaggaggatttatctcggaaacagct
ctgcatctttttgctgcgtttgggggctgggggactctcatcaaccccactggaatcgca
gttttgggctctgtggggggaatagtcgtggtgcatgatggagagaagagagtagtggtg
tttaaccaacaagggaggaagctgcacagttttggagaaaaaggaacaggtaatggggac
atctgttacccagtggatgtggcagtgagtcctactggttatgtcatagtgacagatgca
ggggataaatctgtgaaggtttttacatccaggggaatacacgtagtgacggtcaaagat
tgcttccaacttccttggggcgtggacacagactgttgtgggcgcatcctggtttctgac
ctccaggctggcaatctgctcagacttaaagtgaactttagtgatggcattatcctggag
agtgaaaatgtcctagccaacctttgttgtcccaaagcggtggctcactgccaaaaaaac
ggaaacacagcagtgttggagcatccaagaggaaggcaccacaacagaaatttgaaggtg
tttacgaaagacttccaccttctttaccagatggacagcttcagcctgatcctccaaacg
tccttcaggttcaacatttcagatgtggctttcagcagtgatggagatgtggttgtgtct
gactgtgatcaggggttgatttgtagtttaggaaaccttcagaaccacccagtcctgact
cctcttgtcggggtccatctcattcgacctgctgggttggtaatactgaacaacacgctc
atcacagtggatggtggcgaccatacggtgaagatttattctagtaaacccggtgcttga
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