KEGG   Xiphophorus hellerii (green swordtail): 116717821
Entry
116717821         CDS       T07363                                 
Symbol
itga10
Name
(RefSeq) integrin alpha-10
  KO
K06586  integrin alpha 10
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe04510  Focal adhesion
xhe04512  ECM-receptor interaction
xhe04810  Regulation of actin cytoskeleton
xhe04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    116717821 (itga10)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    116717821 (itga10)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    116717821 (itga10)
   04810 Regulation of actin cytoskeleton
    116717821 (itga10)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:xhe04515]
    116717821 (itga10)
Cell adhesion molecules [BR:xhe04515]
 Integrins
  Integrin alpha subunits
   116717821 (itga10)
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_2 Integrin_A_Ig_1 VWA_2 FG-GAP_3 FG-GAP_2 Integrin_A_Ig_3 vWA_SIBA-E ITGAX-like_Ig_3
Other DBs
NCBI-GeneID: 116717821
NCBI-ProteinID: XP_032415344
LinkDB
Position
3:15068559..15106073
AA seq 1168 aa
MELRKNLLCLEFILLLKGLCQCFNIDVKHPRIFTGPEDAQFGFSVLQHEADGEKSMLVGA
PWDGPPNNRKGDVYKCVVGEEKNSNCSKVNLGETALRNVSKNLRNSHLGMTLTPDSPDGF
LACAPLWSQECGTSMFSTGICASVGDDLEPRGTIAPTEQKCQTFMDIVIVVDGSNSIYPW
YEVQNFLSNILSKFHISSDQMQVGILQYAEVAVHEWSLKDYQTTQEVVEAAKNISRQEGR
ETRTAYAIQMACTEAFSAERGAREGATKVMIVVTDGESHDGDELPDALEECESRNITRYA
IAVLGYYIRKQQDPETFINEIKYIASDPDDEYFFNVTDEAALNDIVDALGDRIFTLEGTL
GYNQSTFHMEMSQIGFSTHTLDDGILFGIVGAYDWDGGVLKEGTNGVIIPPREAFESEFP
LELKNHAAYLGYTVSSVVVGDWRRLYVAGAPRFKHKGKVVLFELHENGYVDIVQALNGEQ
IGSYYGSELCGLDIDKDGITDVLLVAAPMYLGSGNKEAGKVYIYTLNGEGKFISNGTLKS
DNKSQDARFGYALAAAPDLNHDGFTDLVVGAPLEDEHRGAIYVYHGYDIYIIHDCKQHIL
GSSLSPSLQYFGRSVSARLDLDGDELIDLAVGAQGRAVLLSSRSIVQINVSLSFQPHSIN
VIQKTCQRGGRESACLNATACFTAVSRSPGPHSNAFDLWVSAMLDDRKFSARALFDESSH
RQMQLPVRVQTRKTLCYKLPFHVYDTADYIRPISFSLRFKINDTETGPVLDEGWPTSVKK
FIPFFKDCGEDDVCTTDLVLQAHLDISGTRQKPYVIRSPRRRLSVEVQLQNRLENAYNTS
LKLHYSRNLHFSSISIKENANFKIECTALGSNSHSCNVSYPVFRSHSKVNFMLEFEFSCT
SLHNRLQMKLNATSDSSEREGTLGDNSVQLQTFVQYEPDLFVSSESNLNRYEVHPTRTAS
EAMGPEFYTYIRLLNIGCYSVSNLELRVLLPSVAAEDAVFMTVTDVFTYNATGMKCGVLS
DVTQLKSRQKDVRPLHPEDMMHDEILNCSRSWCTEVVCEVRQLGQQAVIRISRRVHDDFF
RKVKYKSVRIISAYSLSAQENNLITLGAGTVQGETVLEVLKGRAIPISLWILIGSIIGGL
LLLALIIFILWKLGFFARKHREDENHED
NT seq 3507 nt   +upstreamnt  +downstreamnt
atggagctgcgtaaaaacctgttgtgcctggagtttattctccttctgaaagggttgtgt
cagtgtttcaacatagatgtgaaacatcctcgcatcttcaccggcccagaggacgcccaa
tttggcttctctgtcctacagcatgaagcagatggagagaaatcgatgctggttggagcc
ccgtgggatgggccgcccaacaacaggaaaggagacgtgtataaatgtgttgttggggag
gagaaaaactcaaactgtagtaaagtaaaccttggtgaaactgctctacgtaatgtttct
aaaaatctgaggaactctcacctgggaatgaccctcacaccggactcacctgatggattt
ttggcgtgtgcccctctgtggtcgcaggagtgtgggacgtcgatgttcagcactggcatc
tgcgcctctgttggcgatgacctggaaccgagaggcaccatcgctccaacagagcaaaag
tgtcagaccttcatggacatcgtgatcgttgtggacggctcaaacagcatctatccctgg
tatgaagtccagaacttcctcagcaacattctcagcaagttccacatcagctcggaccag
atgcaggttggtatactgcagtatgcagaggtagcagtccatgagtggtctctgaaagac
taccagaccacacaggaggtggtggaggccgccaagaacatcagccgacaggagggacga
gagacacgcactgcatatgccatccaaatggcctgcacagaggcgttcagcgctgagcgt
ggagccagggaaggcgccaccaaggtgatgattgtggtcacagacggggagtcgcacgac
ggggacgagctgccagacgctctggaggaatgtgaaagcagaaacatcaccagatacgcc
atcgctgttctggggtattatatccgcaaacagcaggatccagagaccttcattaatgag
atcaaatacatcgccagcgacccagatgacgagtactttttcaacgtgaccgatgaagct
gcgctgaatgacattgtggacgctctcggagatcggattttcactcttgaaggtaccttg
ggctacaatcaaagcacgttccacatggagatgtctcagatcggtttctcaacgcacaca
ctggatgatggcattctgtttgggattgtgggcgcctacgattgggatggaggggtcctg
aaggaagggaccaacggagtaattatcccccccagagaagcctttgaaagtgaatttcca
ttggagctcaaaaatcatgctgcttatttagggtacactgtgtcatctgtggttgttggt
gactggaggaggctgtacgtggctggggctcctcgatttaaacacaaaggcaaagtcgtt
ttatttgaactccatgaaaatggctatgttgacatcgtgcaggctttgaatggagaacag
attggatcttactatggcagtgaactgtgcgggctggatatcgataaagatggcatcact
gacgtccttttggtcgctgctcccatgtatcttggctcaggaaacaaggaagctggaaaa
gtctacatctacactctcaatggggagggaaaatttatatctaatgggactctgaaatcc
gacaataagtctcaggatgccaggtttggttatgcactggcggctgctcccgatctgaac
catgatggcttcactgacctggtggtgggagcgccgctggaggatgagcacagaggggcc
atctatgtctaccatggatacgatatttacatcatccatgactgcaaacagcatatatta
gggtcgtccctctccccctctctgcagtattttggccgcagtgtaagtgcacggttggac
ttggacggtgatgagctgatagatttggcagtgggagctcagggcagagccgtgctgctc
agctccagaagcatcgtccagatcaatgtgagtttgtccttccagccgcactccattaac
gtcattcagaagacgtgtcagaggggcggcagagagtcggcatgcctcaacgccacagcc
tgcttcacggccgtttcacgctcacctggaccacacagcaatgcttttgatctttgggtg
tcagccatgttggatgacaggaagttttcagcgcgagctctgttcgatgaaagctcccac
agacagatgcagcttccagtgcgagtgcaaacaagaaaaactctctgctacaagctgcct
ttccatgtatacgatacagcagattatattcgcccaatcagcttctcactgcggtttaag
atcaacgacacagagacgggtccggtgttggatgaaggctggccaacaagcgtcaagaaa
tttataccatttttcaaagactgtggcgaagatgacgtttgcacaacagatctggtcttg
caggcacacctggacatctctggtacaaggcagaaaccttatgtgattcgcagccctcgt
aggcgtctgtcggtggaagtgcagctccagaacaggctggaaaatgcctacaacactagc
ctgaagctgcactactcacgcaacctccacttctccagcatcagcatcaaagagaatgcc
aacttcaagatagagtgtaccgctctaggttcaaacagccactcgtgtaacgtcagctac
ccagtgtttcgctctcattcaaaggtgaattttatgttggagtttgaattcagctgcacc
tctttgcacaatcggttacaaatgaagctcaatgctaccagtgacagcagtgagagagag
ggaactctgggggacaacagtgttcagctgcagactttcgtacaatatgagccagatctc
tttgttagcagtgagtctaacctgaaccgctacgaggtccatcccacacggacagcatca
gaagccatgggtccagagttctacacgtacatcaggctactgaatatcggctgttattct
gtgagtaatctggagctgcgtgtgcttttgccctctgtggcagcagaagacgccgtcttc
atgactgtaacggatgtcttcacatacaacgccacaggaatgaagtgcggagtgctgagt
gatgtaacccagttgaagtccagacagaaagacgttcgtccccttcatcccgaggacatg
atgcatgatgaaatactgaactgcagccggtcgtggtgcacagaggtcgtctgtgaggtg
cgacagctcggtcagcaggcggttattcgaatcagccgcagagttcatgatgactttttc
agaaaagtcaaatataagtcagtgaggataattagcgcctacagtctctcagctcaggag
aataacctcatcactctgggagcaggaacagtccagggggagactgtcctagaggtgctg
aagggccgagctattcccatctccctctggattttgatcggcagcatcataggcggtttg
ctgctattagcactcattatattcatactgtggaagcttggattcttcgcacggaaacat
agagaggatgaaaaccacgaggactga

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