Xiphophorus hellerii (green swordtail): 116717824
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Entry
116717824 CDS
T07363
Symbol
rnf115
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116717824 (rnf115)
04121 Ubiquitin system [BR:
xhe04121
]
116717824 (rnf115)
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116717824 (rnf115)
Membrane trafficking [BR:
xhe04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
116717824 (rnf115)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116717824 (rnf115)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
Zn_ribbon_19
zf-RING_5
zf-Nse
C1_2
zf-ANAPC11
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
116717824
NCBI-ProteinID:
XP_032415348
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All DBs
Position
3:15113349..15122904
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AA seq
314 aa
AA seq
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MAEAAAVPPHRFFCHCCKGEVNPKLPEYICPRCDSGFIEEVTEDSSLLEGGANGLDDTAT
QFAELWHLLLLERPFTTDRDSPDSEHRLPGGRLMGFGDLGGLGGGSIGGSVPTGLGGSMG
GLLGSGDSWGQGRPPRLGSQRRYRSRGSSRPDRSPAVEGIVQQFLAGLFANSGVPGSPPL
SWTGMLHSNPGDYAWGQGGLDAVITQLLGQLENTGPPPAEKEKISSLPTVSITQEQADCC
MECPVCKEDFAVGEPVRQLPCNHFFHSECIVPWLEMHDTCPVCRMGLNGEDSSSQPSESP
SLSTDPRTQERWSF
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggctgttcccccgcatcggtttttctgtcactgttgtaagggagag
gtaaaccccaaactcccggaatacatttgtccaagatgtgattcaggtttcatagaggaa
gtaacagaggactccagcctcctagagggcggcgctaatgggctagatgacacagccaca
caatttgcagagctatggcatcttttgttactggagcggccatttacaacagacagagac
agtcctgactccgagcaccggctccctggaggacgcctgatgggcttcggtgatctggga
gggctgggaggcggatcgatcgggggatctgtccccacaggtctgggaggatccatgggg
ggtctgctaggatccggggactcctgggggcaagggcgtccgcctcgtttaggcagccag
aggagatacaggtccagaggcagcagcaggccagatcgctcaccagcggttgaggggatt
gtacagcagtttctagctggactctttgccaactctggagttcccggctcacctcctctg
tcatggacagggatgctgcactctaacccgggcgattacgcatggggacagggagggtta
gacgccgtcataacgcagttactaggtcaactggagaacacaggccctcctccagcggag
aaagagaagatttcttccctcccgactgtcagtataactcaggaacaagcagactgctgt
atggaatgcccagtgtgcaaagaggactttgcagtaggagaaccagtcagacagctaccc
tgtaaccacttctttcactcagagtgtatagtaccatggctggaaatgcacgacacgtgt
ccagtgtgtcggatgggtttgaacggagaagacagcagcagccagccctcagagtccccc
tcgctctccacggacccccgcacacaggagagatggtctttttga
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