Xiphophorus hellerii (green swordtail): 116717828
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Entry
116717828 CDS
T07363
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116717828 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116717828 (prpf31)
Spliceosome [BR:
xhe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
116717828 (prpf31)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
116717828
NCBI-ProteinID:
XP_032415351
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All DBs
Position
3:14418854..14425745
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AA seq
505 aa
AA seq
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MSLADELLADLEEAGDEGEDGLYPEEEEGDSDGERSQGRMEGALEDIPEEMEVDYSKAES
VASIAKLRNSKQFSDIMEKISEYIGKQRKNSDVSGPVEADPEYRLIVAANNLTVEIDNEL
NIIHKFTRDKYSKRFPELESLVPDSLDYIRTVKELGNNLEKCKNNETLQQILTNATIMVV
SVTASTTQGSLLTEDELKQLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGAST
AAKIMGIAGGLTNLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGFIYHCDVVQSLPPDL
RRKAARLVAAKCTLASRVDSFHESSDGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPL
DGQRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRV
RQAQVNEATKARISKSLQRTLQKQSMTYGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQA
AEKKVAEANQKYFSNMAEFLKVKKE
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcgctgacgagctcctggctgatctggaggaagccggagatgagggagaagat
ggattgtatccggaagaagaggagggggatagcgatggagagaggagtcagggaaggatg
gagggagcgctggaagatattccagaggagatggaggtggattacagtaaagctgagagc
gtggcgtccatcgctaagctccgcaatagcaaacagttttcagacattatggagaaaatc
tcagaatatattggaaagcagcgcaaaaactcagacgtttcaggtccagttgaggccgat
ccagaatacaggctgattgtagcagccaataatctcaccgtggagatcgacaatgagctc
aacataattcataaattcactagagacaaatattccaagaggtttccagagctcgagtct
ttggtgccagattctctggattacatccgcacagtcaaggaactgggaaacaatctggag
aaatgtaagaacaatgagactctgcagcaaatcctgaccaatgctaccatcatggtggtc
agcgtcacagcttcgaccacacaaggatcgttgctgactgaggatgaactgaagcagctt
gaagaggcgtgcgacatggcgctggagctgaaccaatccaaacacaggatatacgagtac
gtggagtccagaatgtccttcatagccccgaacctgtccatcatcgtgggagcatcaact
gctgccaagattatgggaatcgctggcggtctcactaacctttcaaagatgccggcctgt
aacctgatgctgctgggggctcagaggagaacgctgtctggcttcagcagcacgtctctg
cttccacacacaggattcatctaccactgtgacgtcgtgcagtcgctgccgcctgacctg
aggaggaaggcggcccgtctggtggcagcaaaatgcaccctggcttcacgagtggacagt
tttcatgagagctcagatggaaaggttgggtatgatctaaaagaagagatcgagaggaag
tttgataaatggcaggagccgccgccagtgaagcaggtcaaacctctgccggcgccgctg
gatggacagaggaagaagagaggagggagaaggtatcgaaagatgaaggagcgtctcggg
ctgacggagattaggaaacatgccaacagaatgacctttgcagagattgaagatgatgct
tatcaggaggatctgggcttcagtctgggtcagctgggaaaaagcggcagcggcagagtc
agacaggctcaggtcaacgaggccaccaaggcgaggatctccaaatccctgcagaggacg
ctgcagaagcagagcatgacatatggaggaaagtccacagtcagagatcgctcgtcggga
accagctccagtgtcgcttttactcctcttcagggcctggagatcgtaaaccctcaggct
gcagagaagaaggtggctgaagccaaccagaaatatttctccaacatggcagagttcctc
aaagtgaaaaaggaatga
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