Xiphophorus hellerii (green swordtail): 116717842
Help
Entry
116717842 CDS
T07363
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A isoform X1
KO
K12876
RNA-binding protein 8A
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03013
Nucleocytoplasmic transport
xhe03015
mRNA surveillance pathway
xhe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116717842 (rbm8a)
09122 Translation
03013 Nucleocytoplasmic transport
116717842 (rbm8a)
03015 mRNA surveillance pathway
116717842 (rbm8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116717842 (rbm8a)
03041 Spliceosome [BR:
xhe03041
]
116717842 (rbm8a)
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116717842 (rbm8a)
Spliceosome [BR:
xhe03041
]
Complex C
Other components
EJC/TREX
116717842 (rbm8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
116717842
NCBI-ProteinID:
XP_032415370
LinkDB
All DBs
Position
3:complement(2623355..2626631)
Genome browser
AA seq
175 aa
AA seq
DB search
MADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGLEEGSRSRAKEDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQDMMGQTISVDWAFVRGPPKNKRRGGGRRRSRSPDRRRR
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgttagatcttcatgaggcgggaggcgaagactttcctatggatgaggat
ggtgatgagagcatccacaagctgaaagagaaggccaagaagagaaaaggacgaggcttc
ggcttggaggagggatccaggtccagagctaaagaggactatgacactgtggagcaagat
ggggatgaaccaggtcctcagagatcggtggagggctggatcctgtttgtgactggtgtg
catgaggaggcaacagaggaggacatccatgacaagttttcagagtttggagaaattaag
aacctgcatcttaaccttgatcgaagaacaggttacctgaagggctatgcactagtggag
tatgagacgtacaaagaagcgcaggcagccatggagggcctcaatggtcaggacatgatg
ggccagactatcagcgtagactgggcgtttgtcagaggacccccgaagaacaagaggagg
ggaggtggacggagacgcagcagaagtccagaccggagacgacgttga
DBGET
integrated database retrieval system
