Xiphophorus hellerii (green swordtail): 116717868
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Entry
116717868 CDS
T07363
Symbol
dennd4b
Name
(RefSeq) DENN domain-containing protein 4B
KO
K20163
DENN domain-containing protein 4
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116717868 (dennd4b)
Membrane trafficking [BR:
xhe04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
116717868 (dennd4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
DUF2464
PPR_long
PPR
SPA
Motif
Other DBs
NCBI-GeneID:
116717868
NCBI-ProteinID:
XP_032415399
LinkDB
All DBs
Position
3:414456..431435
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AA seq
1504 aa
AA seq
DB search
MTDEKCPQLVDYFVVAGLDPAGPWRSLDEDGRASSSSSSSPAAAAAAVRAAEPVTDLAVI
ARGLGEEVPEGFTCIEKTLGGHSAELSAGLINNPHLYLCYRRGRDKPPVLDLGVLYEGKE
KPKQGWYVIETTPYSRSASLSSGGAPTAHRVFLMYRRALDSQGLHTLGVTDIALLMPGKG
EVAPHTFCRVDKNLNTGMWGPALHVCYKRAVAKANALVFEAGLISRYPEEDLEAFPLPES
VPVFCLPMGVTVESWPLNSKYQLPVFSTFVLTSASGDKVYGAAIQFYESFSRDLLSERQN
VRLGLLSVVDRRPITSRSLHAKKSICVLSHWPFFTVFQKFLTFIYRYSISGPHVLPLEKH
ISSFMHNVPFPSPQRPRILVQLSPYDNLLLCQPVSSPLPLSGASFLKLLQNLGPENSCTL
LLAVLTEHKLLLHSLRPDVLTSVSEALVSMTFPLRWLCPYIPLCPLQMADVLLAPMPFIV
GVHSSYFDLYDPPPEVVCVDLDTNTVFQSEDKKPLSWRSLPRKHGKTLFITLTNLHRTLE
KICSPGQEEATLEFLLTDYDQIYRRQKQLELEIQEAFLRFMSCLLRGYRAFLLPITQAPS
DTTTDCSSLFNLQGFLKSRDRSQQKLYAQMSRTQMFTQFIEECSFVSDRHACLEFFDECV
QKVDVEKPEEVRLIDLDENGGGEHTVFIMPPEEPQEADGAECPARYSYETFPRLTAELFD
RPQDPLRAPTRGSAPSSPAPRRTKQEIKVAQKRAQKYSAVPDMWSKCLLGHCYGLWFIYL
PTFVRAEGSKVRALHSAHDVLRHMETRKVVLPDEVCYRILMQLCGQYGQPVLAVRVLLEM
KKAGITPNTITYGYYNKAVLECKWPSTNQGGRLRWAKLRNVLLAVAQFRQPIKRRRKSGS
VGSRGAMMELDQKPRPQSALIRQSSWSGLSESSSHESLTGSLVKSSSLSSMKTPTVSELK
VCKKSPVLHGSGTNGDTVQRKPPLGRREASAPPAAPPGGVVVRRSQVCLSTFYTESELDC
RCEPRLSRSDRSGSSGGKNKARTVDENSNHVSSPSRGGLAGKLQQLLTPTKNRASVRRAA
SVENRRSGGGIGRKVSDQRQSRKSQGPESLLKAKERLVNATSESSLSVGSDLDLSDTPTT
VYPLRKSWDANQEGAGIEVLMSSCSLCRSCNSLVYDEEIMAGWTSDDSNLNSSCPFCAAS
FVPFLNAEICDPGPVSSAERSTMNLEDEVESAVRPPSGHEASQRPQCNGLSDDSSSETST
YSETSKATTVSSVGGTPQVTVAYLSPLVLRKELESLLENEGESVLAQPQFLDSHSIIFWN
LVWYFQRLGLPSNLLQLVRSSPLVSHFTQSENSAVRVRLLWDTLSPDTDQWPPLYVLWRI
HSGALMRSYSWRRHNHPFTLSFLEEVLRWVGMNEVHKAITLFLDTLEKQPGSPQTQRSLY
REMLFLTLAAMGKDHVAAFDKKYKTAFLRLSSSLGRDQLRRKRAQPPSTKAVDCRRSFHP
PLEC
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atgacggatgagaaatgtccccagctggtggactacttcgtggtggcgggcctggacccc
gccgggccctggaggtccctggacgaagacggccgggcctcctcctcctcctcttcttca
ccggcggcagcggcggcggcggtccgggcggcggagccagtgacggacctggcggtgatc
gctcgcggtctgggggaggaagtgccggaaggtttcacctgcatagagaagaccctgggg
ggccactcggccgagctgagcgccggcctcatcaacaacccacacctctacctgtgctac
cgccgggggcgggacaaaccaccggtcctggacctgggggttctgtatgagggtaaggag
aagccgaagcagggctggtacgtcatcgagaccacgccctacagccgctcggccagcctg
agctctggcggcgcccccacggcccaccgggtcttcctcatgtaccgccgggccctggac
tcgcagggcctgcacacgctaggcgtcaccgacatcgccctgctgatgcccggcaagggg
gaggtggcgccgcacacattctgtcgggttgacaagaacctcaacacgggcatgtggggt
ccagctctgcacgtgtgctacaagagagccgtggccaaagccaacgccctggtgttcgaa
gccggtctgatcagccggtatccagaggaggacctggaggcgttccctcttcccgagtcg
gtgccggtcttctgtctgccgatgggcgtcacggtggagagctggccgctgaactccaag
taccagctgcccgtcttttccacctttgtcctcacgtctgcctccggagacaaggtctac
ggcgctgccatccagttctacgagtcgttttccagggatcttctgtccgagcggcagaac
gtccggctcggcctgctcagcgtggtggaccgccggcccatcaccagccgcagtctccac
gccaagaagagcatctgcgtcctgtcccactggcccttcttcaccgtcttccagaagttc
ctcactttcatctacagatactccatctccgggccgcacgtcctgccgctcgagaaacac
atctccagcttcatgcacaacgttccgttcccttcccctcagcgtccgcggatcctcgtt
cagctctctccgtacgacaacctgctgctctgccagccggtctcctccccactcccactc
agcggtgcgagcttcctgaagctgctccagaacctgggtccagagaactcctgcacactg
ctgcttgccgtcctcaccgaacacaagctgctgctgcactcgctgcgacccgacgtcctg
acctccgtcagcgaggccctcgtctctatgaccttcccgctgcgctggctctgcccctac
atccctctgtgcccgctgcagatggccgacgtgctgctggcgcccatgcctttcatcgtt
ggcgttcactccagctactttgacctctacgaccccccgccagaggtcgtctgcgtcgac
ctggacaccaacaccgtcttccagtcagaggataagaagccgttgtcgtggcgatcgcta
cccaggaagcacggaaagacgctgttcatcacgctgaccaacctgcaccggaccctggag
aagatctgcagccccggccaggaggaggcgacgctggagttcctgctcaccgactacgac
cagatctaccggcggcagaagcagctggagctggagatccaggaggccttcctgcgcttc
atgagctgcctgctgcggggttaccgcgccttcctgctgcccatcacgcaggcgccgtcc
gacaccaccactgactgcagctccctgttcaacctgcagggcttcctgaagtctcgggac
cggagccagcagaagctgtacgcccagatgagccggacccagatgttcacccagttcatc
gaggaatgctccttcgtcagtgaccgccacgcctgcctcgagtttttcgacgagtgcgtc
cagaaggtggacgtggagaagccggaggaggtgcggctgatcgacctggacgagaacggc
ggcggcgaacacaccgtcttcatcatgccgcccgaggagccgcaggaggccgatggcgcc
gagtgccccgcccgctacagctacgagacgttccccaggctgacggcggagctgttcgac
cgaccgcaggacccgctgcgcgccccgaccagaggcagcgcccccagcagccctgccccc
cgccgcaccaagcaggagatcaaggtggcccagaagcgggcccagaagtactcggcggtt
ccggacatgtggtccaaatgcctgctgggtcactgctacggcctgtggttcatctacctg
cccaccttcgtccgggccgaaggctccaaggtccgcgccctgcactccgcccacgacgtc
ctccggcacatggagacccgcaaggtggtgctgcccgacgaggtgtgttaccgcatcctg
atgcagctctgcggtcagtacggccagccggtcctcgccgtcagagtcctgctggagatg
aagaaggccgggatcacgcccaacaccatcacctacggatactacaacaaggctgtgctg
gagtgtaagtggccctcgaccaatcagggcggccgtctccgctgggctaagctacggaac
gttctattggccgtggctcagttcaggcagccaatcaaacggcggcggaagagtggttct
gtgggctccagaggagccatgatggagctcgatcagaagccccgcccacagtccgctctg
attcgtcagtccagctggagcggcctgagcgaaagctcgagtcacgagtctctgaccggg
tcgctggtgaagagctccagcctgagcagcatgaagacgcccacagtcagtgagctcaaa
gtctgtaagaagtcccccgtcctccacggttccgggacaaacggggacacggtccaacgg
aagcccccgctgggacggagagaagcctccgctccgcctgcagcgccccctgggggagtc
gtggtgcggcgcagtcaggtctgcctttccaccttctacaccgagtcggagctggactgc
agatgtgaaccgaggctcagcagatccgacagatccgggagctctggtggaaagaacaag
gccagaaccgtagacgagaactccaaccacgtgtcgtccccgagccgaggaggcctggca
gggaaactgcagcagctcctcacaccgaccaaaaaccgagcgtcggtccggcgcgccgcc
agcgtggaaaaccgccggtccggaggagggattggtcggaaagtgtcagatcagaggcag
tccaggaagtcccaggggcctgaaagtttgctaaaggcaaaggagcggctggtgaacgcc
acatcagagagctcactgtcggtaggaagtgacctggacctgtcggacacgcccaccacg
gtgtatcctctgcgcaagtcgtgggacgccaaccaggagggggcgggaatcgaggttctg
atgtccagctgctcgctgtgccgcagctgcaactctctggtgtacgacgaggagatcatg
gcgggctggacctcggacgactccaacctgaactcgtcctgcccgttctgcgccgcctcc
ttcgtcccgttcctgaacgcagagatctgcgacccggggcctgtcagcagcgcggagcgc
tccaccatgaacctggaggacgaggtggagagcgccgtgaggccccctagtggtcacgag
gcgtcccagcggccccagtgcaacggactgagcgacgactccagctctgaaaccagcacc
tactccgagaccagcaaggccaccacggtgtcgtcggtgggagggactcctcaggtgacg
gtggcctacctgagccctctggttctgaggaaggagctggagagtctgctggagaacgag
ggagagtcggttctggcccagcctcagtttctggacagccactccatcatcttctggaac
ctggtctggtacttccagcggctcggcctgcccagcaacctgctgcagctggtccggagc
tcgccgctggtcagccacttcactcagtcggagaactctgcggtgagggtccggctcctc
tgggacacgctgagccccgacaccgaccagtggccgccgctctatgtcctctggaggatc
cacagtggcgccctgatgaggagctacagctggaggcggcacaaccacccgttcacattg
tccttcctggaggaggttctgcgctgggtgggcatgaacgaggtgcacaaggccatcacg
ctcttcctggacaccctggagaagcagcccgggtcgccacagacccagaggagtctctac
cgggagatgctgttcctgacgctggcggcgatgggaaaagaccacgtcgctgcattcgat
aagaagtacaagacggcgttcctgcgcctcagcagctccctgggccgggaccagctccgc
aggaagcgggcccagcctcccagcaccaaagccgtcgactgcagacgcagcttccacccg
ccgctggagtgctga
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