Xiphophorus hellerii (green swordtail): 116717904
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Entry
116717904 CDS
T07363
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116717904
Membrane trafficking [BR:
xhe04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
116717904
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_LRWD1
Ig_2
LRR_9
ig
V-set
LRR_Zer-1
LRRNT
LRR_EndoS
Ig_VEGFR-1-like_5th
Ig_5
Motif
Other DBs
NCBI-GeneID:
116717904
NCBI-ProteinID:
XP_032415472
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Position
3:complement(4657585..4676737)
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AA seq
604 aa
AA seq
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MFVESVVRWWVWSILLQFGLGVSAGGCPSRCTCRPEAREAVCSGKYLTSVPEGVSNDARR
LDLSRNRIKTVGRRQFSGLLQLQELDLSDNVISMIEVEAFLGLRNLRTLRIKNNRLKILP
VGVFSGLSSLRYVDLSQNEILVFLDYTFKEMVNLQTLEAGENDLVFISQRAFFGLQNLQE
LNLDRSNLTSIPSEALSQLQSLTQLRMIRLTISALPNNAFRRLHRLRSLVISNWPALDSI
AANSLIGLNLTSLVISSCNLSSIPYAALRHLVYLRFLDLSYNPITVIQGNLLGDLLRLQE
LHLAGSSLLQIEPGAFRGLSFFRMLNVTSNQLTTLEESAFHSVGNLQVLRLDGNPLACDC
RLLWVVRRRLRLNFDGHQPTCSSPDTVKHREFREFSEKELPKLFTCRPARVLDRRPQEAR
VEEGTTVLFSCKADGDPLPAITWISPQKTVFSLSGRIRVLQNGTLEVRFAQVQDSGTYQC
LAGNAAGNDSLTVGLYVKGLPRNRTIPLFTEEGWIEPSTAQAANSSAQMAKPYPFDAKTL
IIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDFVPRSSVGGGGGDGGEGGRFT
MKLI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggagtcagttgtccgatggtgggtgtggagcatcctgctacagtttggtctt
ggtgtatctgcaggaggctgcccttcacgctgtacgtgccgacctgaggcaagagaagct
gtctgctctgggaaatatttgacttctgtgccagagggtgtatccaacgacgccagacgt
ttggatttatcccgcaacaggattaaaactgtgggacgtcgtcagttctctggcctcctg
caacttcaggagttggacctcagtgataatgtaatctccatgattgaagtagaggctttt
ttgggccttaggaatcttaggacacttcgaattaaaaacaaccgtctcaagatcctccca
gtgggagtgttttctggcttgtctagtctgcgctatgtggacttgagccagaatgagatt
cttgtttttctggactatacattcaaagaaatggtcaacctgcaaacgctggaagctggg
gagaatgaccttgtcttcatctcacaaagagctttctttggtctgcagaatctacaagag
ctcaacttagaccgcagcaatctgacctctattccctccgaagccttgtctcaactccag
agcctgacccaacttcgcatgatacgcctaactatttctgcactacccaacaatgctttc
cgacgactccaccgtttacgaagtctcgtgatctcgaactggccagcattagactcaatt
gccgccaacagtctaattggtcttaatttgacctcacttgtcatcagtagctgcaaccta
agctcaattccttatgcagcccttcgtcatctagtgtacctacgctttctagacttgtcc
tacaaccctatcactgtcatccaaggtaacctgctgggggatctcctgagactccaggag
ttgcatcttgccgggtcaagtctgctacaaatagagccaggagccttcaggggactgtcc
ttctttcgcatgcttaatgtgacatcaaatcagctcactactttggaggagagtgctttc
cattctgtggggaaccttcaggtgttgcggttggatgggaatccccttgcatgcgattgt
cggcttctgtgggtggtccgtcgcaggctgcgcttgaactttgatggacatcagcccact
tgctcttctcctgatacggtgaaacatcgagaattcagagagttctcagaaaaagaactc
ccaaagcttttcacctgtcgccctgctcgtgtcttggaccgcaggccgcaggaggcgaga
gtggaagagggtaccaccgttctgttttcctgcaaggctgatggggatccattaccagct
atcacctggatttccccccagaagactgtgttctccctttcaggaagaatcagagtttta
cagaatggtactctggaggtgcgatttgctcaggttcaggacagtggtacataccagtgc
ctggcaggcaatgcagctggcaatgacagcctgactgtgggtctatatgtgaaggggctt
ccacgtaacagaaccatccctttattcacagaagaaggttggattgagccttcaactgcc
caagctgccaactcctcagctcaaatggccaagccatatccctttgacgcaaagaccctg
ataattgccactaccatgggatttctgtcattcctcagttctgtggccatctgttttgtc
ttcatgtttttctggagtcagagcaaaggtcagatcaagcacacagcaactattgacttt
gttcctcgctcttctgttggtggaggaggaggggatggaggtgaagggggcaggtttact
atgaaacttatttga
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