Xiphophorus hellerii (green swordtail): 116718118
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Entry
116718118 CDS
T07363
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xhe03021
]
116718118 (ctr9)
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
116718118 (ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_16
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
ARM_TT21_5th
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
116718118
NCBI-ProteinID:
XP_032415693
LinkDB
All DBs
Position
4:complement(17813077..17822913)
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AA seq
1152 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYK
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFGRALELNSKCVGALVGLAV
LELNNKDSESIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLDR
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GYFREARDVFAQVREATAEISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQNTEVL
LYLARALFKCGKLQECKQMLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLSKAGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEEKE
LRAKQEQERDLLRQQMLKEQEERQKREAEEQKKLLEQRALFVEKTRNLLTFVEGPKEATK
EKKKGGGGGGGRRKKGGDADDFVNDDSDEDLPVKKKKRRKSSGSEQEDGEDGKKKKRRRP
AKGDDSDDEEGASRPKKQRKPKEGRKKIEKSQPERMPPSLKGKIKSKAIISSSESSSDED
GLKIAEDRTRDSGSGSEDEGGHRKRIASDSESDGGRNRSGSEAGSPRRSVGSDDDSGSDR
PVKKRRVQRQSDSEQSDNESKRSQSGSDDESRAASPAAASDRGSEAGSDNEGSPRRSDNG
SEQEASNNDDSD
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggttccattgagatccctttacgggacaccgatgaggttattgagctcgac
ttcgaccagctgccagagggagatgaggttatcagcatcttgaagcaggaacacacacag
ctgcacatctggatcgctttggcgttggagtactacaagcaaggcaaaacagaggacttt
gtcaagcttttagaggcagcgcgtatcgatggaaacctggactacagagaccacgagaaa
gaccagatgacctgcttggacacgttagcagcttattatgtccagcaggctcgtaaagag
aaaaacaaagatgccaagaaggagctcatcacgcaggctactctgctttacaccatggca
gataagatcattatgtatgatcagaaccatttgttggggcgagcctgcttctgcctgctg
gaaggagacaagatggaccaggctgatgctcagttccactttgtgctcaaccagtccacc
aataacatcccggctttgcttggtaaggcctgcatctcattcaataagaaggactacaag
ggagcactggcgtactataaaaaggctttacgaacaaaccctggctgcccagctgaagta
agactggggatgggtcactgcttcgtcaagctcaataaactggaaaaggcccgtttggcg
ttcggtcgagccctggagctgaactctaagtgtgtgggagcgctggttggtttggccgtt
ttagagctcaacaacaaagattcagagtctattaagaacggagtgcagctcctgtcgcgg
gcttacaccatcgaccccagcaaccccatggtgctcaaccacctcgccaaccacttcttt
ttcaaaaaggactacagtaaggtccagcatctcgccctccatgctttccacaacacagaa
gtcgaggccatgcaggctgagagctgctatcagttggcgcgttcatttcatgtgcaggag
gactatgaccaggcgtttcagtattactaccaggctactcagttcgcctcttccactttc
gtgctgcctttctttggtttgggacagatgtatgtgtatcgtagagacaaggaaaatgct
gctcagtgctttgaaaaggttttgaaggcctaccccaacaactacgaaacaatgaaaatc
ctgggatccctctacgcaacgtccgacgatcaggaaaagagagacattgcaaaaggccac
ttgaagaaggtgacggagcagtacccagatgatgtggaggcgtggatcgagctggctcag
atcttggagcagaccgacatccagggcgcgttgtcggcttacggcacggccactcgcatc
ctccaggagaaggtgcaggccgatgttccccccgagatcctcaacaacctgggggctctg
cacttcaggcttggcaacctcggggaagctaagaaatattttctagcatctctggaccga
gctaaagctgagggcgagcatgatgagcattactacaacgccatttctgtcaccacttcg
tacaacctggcccgtttgtacgaggccatgtgtgagttccacgaagctgagaaactctat
aaaaacatcctcagggagcatccaaactacgtggactgttatttacgtctcggagcgatg
gctcgtgacaaagggaacttctacgaagcgtccgactggtttaaagaagctctgcagatt
aatcaggatcacccagacgcctggtcactcattggaaatcttcacttagccaagcaggaa
tgggggccgggtcagaagaagtttgagcgaattctgaaacagccgtccactcagaacgac
acgtactccatgctggctctggggaacgtgtggctgcagactctgcaccagcccaccaga
gacagagaaaaggaaaagagacaccaggatcgagctttggcaatctacaaacaagtcttg
cgaaatgacgccaaaaatctctatgctgctaacggcatcggggctgtcctcgctcacaaa
ggttatttccgagaggcgcgtgacgtgtttgcccaggtgagagaggccacagcagaaatc
agtgatgtgtggctgaatctggctcacatctacgtggagcagaagcagtacatcagtgct
gtgcagatgtatgaaaactgcttgaagaaattttacaaataccagaacacagaggtgctg
ctatatcttgcaagagctctcttcaaatgtgggaaactccaggagtgtaagcagatgctg
ctgaaggctcggcatgtggctcccagtgacacggtgctgatgttcaacgtggctctggtg
cttcagagactcgccactctagtgctgaaagatgagaagagcaatttaaaggctgtgctc
agtgctgtgaaggagctcgaactggctcacagatatttcagctacctgagcaaagctgga
gacaagatgaggtttgacctcgctcttgctgcgtccgaggccaggcagtgctctgacctg
ctgagtcaggctcagtaccatgtggccagagccagaaagcaggacgaagaggagaaggaa
cttcgtgccaaacaggaacaagagagggacctgctgcgccagcagatgttaaaagaacag
gaagaacggcaaaaaagagaggcagaggagcagaagaagctcctggagcagagagctttg
tttgtggagaagaccaggaacttgctcacatttgtggaaggaccaaaagaagcgaccaaa
gaaaagaagaagggaggaggcggaggtggagggcgtcgtaagaaaggaggcgatgcggat
gactttgtcaatgacgattcggatgaggaccttccagtgaaaaagaagaagaggagaaag
agcagcgggagcgagcaagaggatggcgaggacggaaagaaaaagaagaggagaagacct
gcaaaaggagacgacagcgatgatgaggaaggagcatctcggcccaaaaagcagcgcaaa
cccaaagaaggacgcaagaagattgagaagtcccagcctgagcgaatgccaccgtctctt
aaagggaagatcaagtccaaggccatcatctcttcctctgaatcctcgtcagatgaggac
ggactgaaaatagctgaagacagaacccgggacagcggctcggggtctgaggacgaaggc
ggtcacaggaagcgcatagcatccgacagcgaatcagatggcgggaggaatcgctccggc
agcgaggcgggaagccctcgccgctccgtcggctcagacgacgactctggcagcgaccga
ccagtgaagaagaggagggtacagcggcagtccgactctgagcagtcggacaacgagagc
aagaggagccagtcgggatcagatgacgaatcgagagctgcctcacctgcggccgcttcg
gacagaggctccgaggctggatcagacaacgaagggtcgccacggcgctccgacaacggc
tcagaacaggaggcgtcaaataacgatgacagcgattag
DBGET
integrated database retrieval system
