Xiphophorus hellerii (green swordtail): 116718175
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Entry
116718175 CDS
T07363
Name
(RefSeq) tubulin alpha-1B chain-like isoform X1
KO
K07374
tubulin alpha
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04145
Phagosome
xhe04210
Apoptosis
xhe04517
IgSF CAM signaling
xhe04530
Tight junction
xhe04540
Gap junction
xhe04814
Motor proteins
xhe05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116718175
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116718175
09143 Cell growth and death
04210 Apoptosis
116718175
09144 Cellular community - eukaryotes
04530 Tight junction
116718175
04540 Gap junction
116718175
09142 Cell motility
04814 Motor proteins
116718175
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116718175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116718175
03036 Chromosome and associated proteins [BR:
xhe03036
]
116718175
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116718175
04147 Exosome [BR:
xhe04147
]
116718175
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116718175
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
116718175
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
116718175
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116718175
Exosomal proteins of other body fluids (saliva and urine)
116718175
Exosomal proteins of colorectal cancer cells
116718175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
116718175
NCBI-ProteinID:
XP_032415770
LinkDB
All DBs
Position
1:complement(30217663..30230952)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPSVIDEVRSGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNSCFEPAN
QLVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgtatctcagtgcacgttggtcaggccggtgttcagatcggcaatgcctgc
tgggagctctactgcctggagcatgggatccagccggacggacagatgcccagtgacaag
accattggagggggagatgactccttcaacaccttcttcagtgagacaggagcagggaag
cacgtccctagagctgtttttgtagacctggagccctccgtcattgatgaggttcgttct
ggaacttaccgccagctgttccacccagagcagctgatcactgggaaggaagatgctgcc
aacaactacgccagaggacactacaccattggcaaagagatcatcgacctggttctggac
aggatccgtaagctgtctgaccagtgcacaggcctgcagggcttcctggtcttccacagc
tttggtggaggaaccggttctggtttcacctccctgctgatggagcgtctctctgtggac
tatggaaagaagtccaagctggagttttctgtttacccagctccccaggtgtccacagct
gttgtggagccctacaactccatcctgaccacccacaccaccctggagcactccgactgt
gccttcatggtggacaacgaggccatctatgatatctgccgcaggaacctcgacatcgaa
cgccccacctacaccaacctgaacaggctgatcagccagatcgtgtcctccatcactgcg
tctctccgttttgatggtgccctgaatgttgatctgactgagttccagaccaacttggtg
ccataccctcgtatccacttccctctggccacctacgcccctgtgatctctgcagagaag
gcttaccatgagcagctcactgtagctgagatcacaaattcctgcttcgagccggccaat
cagttggtgaaatgtgaccctcgccatggcaagtacatggcctgctgcctcttgtaccgt
ggcgacgtggtgcccaaagatgtcaacgctgccattgccaccatcaaaaccaaacgctcc
atccagtttgtggactggtgtcccactggtttcaaggttggcatcaactaccagccacca
actgtggttcctggtggtgacctcgccaaggtccagagggctgtgtgcatgctgagcaac
accactgctattgcagaggcctgggctcggctggatcacaagtttgacctgatgtacgcc
aagcgtgcgttcgtccactggtatgtgggtgagggaatggaggagggagagttctccgag
gccagggaggacatggcagctctggagaaggattatgaggaggttggagtcgactccatt
gagggtgagggagaggaggaaggagaagagtattga
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