Xiphophorus hellerii (green swordtail): 116718236
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Entry
116718236 CDS
T07363
Symbol
nedd4
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4 isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04120
Ubiquitin mediated proteolysis
xhe04144
Endocytosis
xhe04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116718236 (nedd4)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116718236 (nedd4)
09144 Cellular community - eukaryotes
04530 Tight junction
116718236 (nedd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116718236 (nedd4)
04121 Ubiquitin system [BR:
xhe04121
]
116718236 (nedd4)
03029 Mitochondrial biogenesis [BR:
xhe03029
]
116718236 (nedd4)
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116718236 (nedd4)
Membrane trafficking [BR:
xhe04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
116718236 (nedd4)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
HECT type E3
116718236 (nedd4)
Mitochondrial biogenesis [BR:
xhe03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
116718236 (nedd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
116718236
NCBI-ProteinID:
XP_032415878
LinkDB
All DBs
Position
4:complement(15965453..16003811)
Genome browser
AA seq
1268 aa
AA seq
DB search
MARQLRLHFASRRSNTDPLSEGLSCHGEESRVSVSAHGPAENLAHSSVHLKVTPLSPEFA
SSQSSSVFISRVNSGGCNKKSVLQISLQPCGKPSGELEGSVEDGEAGVGVGSDGGSCNSS
MASDAGYCSSNSIFEPELPEKHRSSQERPQVCRRSKVPLRRCSSLVIIPRSPCSTPPASP
VGSAALFALPPLRGSQQPVLQAPASEFLQADEEVTSKEPNGPSLSGHNQPKGNYSSEFRD
SKHTVHFNIPLEDEPKCKLEDKTAVMEQSSNLHSSSVMLRFAHQRPMASAKRAASVASGS
SQLPDAHYPAGLSERQGEAHKKLYRSTSACLFSSSKQPEKNSRVCSSGKGQGKHCHRAIQ
RSFSLEVPYANTGISCHVSNPKLSSPLSPHVHIHLSPCCPAKVPAYPDNFKKSHKGNRET
RDDFLGQVDVPLNQIPTENPNAQRPYTFKDFLLHPRSHKSRVKGHLRLKMTYLPKNLGSE
EETADQTEDSDPGWELLDQDMSGPRQSQLLPPLPPGWEERQDNLGRNYFVNHVTRTTQWH
RPTMQQVIEESHRPQNNNTDVEPAFITRRQISEHDENATPQESPESWEIITEDESTLYPR
NHQLTSTSSSEPPAFSSFSDENRNLCVSRSTTRELRSSQNNQMSNSNHSSLRESSQTSAR
EEQPISPVLLPSSPQLPPGWEEKRDNKGRRYYVNHNTRTTTWVRPVIQKPADSPAAPAAA
AAPAAAAPAAAAPAAAAPAAAAPAAAAPAAAPQSESAPPQNSSPPSQPAAVSPADATQPG
PSAEASADFGSLPQGWEVRSAPNGRPFFINHNTKTTTWEDPRLRIPVQKRRTGSLDPKDL
GPLPPGWEERIHGDGRIFYIDHNTKVTQWEDPRLQNSAITGPAVPYSRDYKQKYEYFRKK
LIKPADIPNRFELKLKRNSVLEDSYRRILAVKRPELLKARLWVEFEGEKGLDYGGLAREW
FFLMSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLTYFKFIGRVAGMAVFHGKLL
DAFFIRPFYKMMLQKPITLQDMESVDSEYFNSLKWILDNDPEDLDLRFTIDEELFGETRQ
HDLKPDGSEIVVTNENKREYIDLVMQWRFVNRIQKQMTAFKEGFFELIPRDLIRIFDGNE
LELLMCGLGDVDVNDWRQNTKYKNGYCGDHMVIQWFWKTVLLMDAEKRIRLLQFVTGTSR
VPMNGFAELYGSNGPQLFTIEQWGTSDKLPRAHTCFNRLDLPPYESFEELREKLNIAIEN
AQGFDGVD
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcagctccgcttgcatttcgcgtcaagacgaagcaacacggaccccctctct
gaaggcctcagctgccatggtgaggaaagcagagtcagtgtgtcagcgcacggccccgca
gagaatctggcgcacagctcagtccacttgaaggtgactcctctgtcaccagagtttgcc
agcagtcaaagctcttcagtcttcatatccagggttaattccggaggctgcaacaagaag
agcgttctgcaaatctcgctgcagccgtgcggaaaaccaagcggcgagttggaagggagc
gtggaggatggagaggccggcgttggtgtcggttctgacggaggatcgtgcaacagcagc
atggccagcgacgccgggtactgcagcagcaacagcatctttgagccagagcttccagaa
aagcacaggagcagccaggagaggccccaggtctgccgcaggtccaaggtcccattgcgg
cggtgctcttccctagtcattattccaaggagcccttgcagcacgccgcccgcgtctccc
gtaggctctgcggctctgtttgctctgcccccgttacggggatctcagcagccggttctc
caggcacctgccagtgaattcctccaagcagacgaagaagtgacgagtaaagagccgaac
ggcccttctctaagtggccacaatcagccaaaaggaaactactcttccgagtttagggac
tcaaaacacacggtacactttaacatcccgctagaggatgaaccaaaatgcaaactggag
gacaagactgcagttatggagcagtcgtctaatcttcactctagcagcgtgatgctacgc
tttgcccaccaaagaccaatggcatcggcaaaacgagccgcatctgtggcttcgggcagt
tcacaactccccgatgctcattacccggctggactctctgaaagacaaggcgaagcccac
aaaaaactttatcggagtacctctgcttgcttgttttcctcatctaagcaacctgagaaa
aacagtagggtctgttcatcggggaagggtcaagggaaacactgtcatcgtgccattcag
aggagcttttcccttgaggtgccttacgctaacaccgggatttcatgtcacgtttcaaac
ccaaaactcagcagccctctttctccacatgtacacattcatttgtctccttgctgccct
gcaaaggttcccgcttaccccgacaacttcaaaaagagccacaaaggaaacagggagaca
cgtgatgactttcttggacaggtggacgttcctttaaatcagataccgacagaaaatcct
aacgcacaaagaccatacacattcaaggattttctgctccacccacgaagccataagtcc
agggtcaaaggtcatctacgtctcaaaatgacctacctgccgaagaacttgggctcagaa
gaggagacggcagatcagacagaggactcagatccaggctgggagcttctggatcaggac
atgtcgggccccaggcagagtcagctgctgcctcctcttcctccgggctgggaggagcgg
caggacaacctcggcaggaactacttcgtcaaccacgtgaccagaaccacgcagtggcac
cggcccaccatgcagcaggtcatcgaggagagtcaccggccgcagaacaataacacagat
gtggaacctgccttcattacacgcagacagatctcagagcacgatgagaacgccacaccg
caggagtctccagagagctgggagatcatcaccgaggacgaatccactttgtaccccaga
aaccatcagctcacatcaacttcctccagcgagccgccggcgttctcctcgttcagcgac
gagaacaggaacctttgtgtttcacgatccacaactagagagctgcgcagttcacagaat
aatcaaatgagtaattcaaaccattccagcctcagagaaagttctcagacttctgcaaga
gaggaacaacctatcagtcccgtgttacttccctcgtcacctcagttgcctccaggctgg
gaggagaagcgtgacaataaaggaagacgctactatgtcaaccacaacacccgaaccacc
acatgggtgcgtccagtcattcagaaacctgcagactcaccagcagcaccggcggcagca
gcggcaccggcggcagcggcaccggcggcagcggcaccggcggcagcggcaccggcggca
gcggcaccggcggcagcggcaccggcggcggcaccacagagtgaatctgcgccgcctcag
aactccagcccgccgtcccagccggcggcggtcagccctgcagacgccactcagcccgga
ccgagcgcagaggcctccgctgatttcggctccttaccgcagggctgggaggtgcgcagc
gctccgaacggaagacctttttttatcaatcacaacacaaagacgaccacctgggaagat
cccaggcttaggattcctgtgcagaagaggaggaccggctcactcgaccccaaagacctc
ggcccgctgccacctggatgggaggagcggatccacggagatggcaggatattctacatt
gatcacaacaccaaagtcacacagtgggaagatcccagattgcagaactcggctataact
ggtccagctgtgccttactctcgagattacaagcagaagtacgagtatttcagaaagaag
ctgatcaaaccggccgacatcccgaaccgctttgagctgaagctgaaacgaaactcggtg
ctggaggattcctacagacgcatcctggcggtgaagcggccggagctgctgaaggctcga
ctgtgggtggagttcgagggagaaaagggcctggactacggcggcttggccagagagtgg
ttcttcctcatgtccaaggagatgttcaacccgtactatggactgttcgagtattctgcc
acagacaactacacgctgcagatcaaccccaactccggtttgtgtaatgaagaccacctc
acctacttcaagtttattggtcgtgtggctggcatggcggtgtttcacggcaaactcctt
gatgcattcttcatccggccgttctacaagatgatgctgcagaagccgatcactctgcag
gacatggagtctgtcgacagcgagtactttaactccttaaagtggattttggacaacgac
ccggaggatttggacctgaggttcaccattgatgaggagctgtttggagagactcgccag
catgacctgaaaccggatggctctgagattgttgtcactaatgaaaacaagagggaatac
atcgacctggtgatgcagtggagatttgtgaacagaatacagaaacagatgacggctttc
aaagagggattctttgagctgataccaagggatctgatcaggatttttgatgggaatgag
cttgagctgctcatgtgcggcctgggagacgtggacgtgaacgactggaggcagaacacc
aagtacaagaacggttactgtggcgaccacatggtcatccagtggttctggaaaacggtg
ctgctgatggacgcagaaaagagaatccggctcctgcagtttgtgacggggacgtccaga
gtcccgatgaacgggttcgcagaactttatggctctaacggaccgcagctgtttaccatc
gagcaatggggaaccagtgataaacttcccagagcccacacctgcttcaaccgtctggac
ctccctccttacgagtcgttcgaggagctcagggagaagctcaacatcgccatcgagaac
gcccagggcttcgacggcgtcgactaa
DBGET
integrated database retrieval system
